RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 C1QTNF5Q9BXJ0 243 aa16.43■□□□□ 0.22
COL15A1-201ENST00000375001 POLR3KQ9Y2Y1 108 aaPredicted RBP16.43■□□□□ 0.22
COL15A1-201ENST00000375001 KLF12Q9Y4X4 402 aa16.43■□□□□ 0.22
COL15A1-201ENST00000375001 MTCL1Q9Y4B5 1905 aaKnown RBP16.43■□□□□ 0.22
COL15A1-201ENST00000375001 S100A7L2Q5SY68 101 aa16.43■□□□□ 0.22
COL15A1-201ENST00000375001 FAM90A2PQ658T7 463 aa16.43■□□□□ 0.22
COL15A1-201ENST00000375001 TREML4Q6UXN2 200 aa16.43■□□□□ 0.22
COL15A1-201ENST00000375001 RPP25LQ8N5L8 163 aaKnown RBP16.43■□□□□ 0.22
COL15A1-201ENST00000375001 FAM231BA6NCW3 169 aa16.43■□□□□ 0.22
COL15A1-201ENST00000375001 GAGE2AQ6NT46 116 aa16.43■□□□□ 0.22
COL15A1-201ENST00000375001 LAMTOR3Q9UHA4 124 aa16.43■□□□□ 0.22
COL15A1-201ENST00000375001 A0A0A6YYD4 124 aa16.42■□□□□ 0.22
COL15A1-201ENST00000375001 EFEMP2O95967 443 aa16.42■□□□□ 0.22
COL15A1-201ENST00000375001 ZC2HC1BQ5TFG8 222 aa16.42■□□□□ 0.22
COL15A1-201ENST00000375001 RPRMLQ8N4K4 120 aa16.42■□□□□ 0.22
COL15A1-201ENST00000375001 FBLN5Q9UBX5 448 aa16.42■□□□□ 0.22
COL15A1-201ENST00000375001 PLXNA1Q9UIW2 1896 aa16.42■□□□□ 0.22
COL15A1-201ENST00000375001 HTN3P15516 51 aa16.42■□□□□ 0.22
COL15A1-201ENST00000375001 ADCYAP1P18509 176 aa16.42■□□□□ 0.22
COL15A1-201ENST00000375001 PVRIGQ6DKI7 326 aa16.42■□□□□ 0.22
COL15A1-201ENST00000375001 FGF11Q92914 225 aa16.42■□□□□ 0.22
COL15A1-201ENST00000375001 LINC01559Q495D7 138 aa16.42■□□□□ 0.22
COL15A1-201ENST00000375001 CHAC1Q9BUX1 264 aa16.42■□□□□ 0.22
COL15A1-201ENST00000375001 TSSC4Q9Y5U2 329 aaPredicted RBP16.42■□□□□ 0.22
COL15A1-201ENST00000375001 CECR9P0C854 216 aa16.41■□□□□ 0.22
COL15A1-201ENST00000375001 GLRXP35754 106 aa16.41■□□□□ 0.22
COL15A1-201ENST00000375001 LHX2P50458 406 aa16.41■□□□□ 0.22
COL15A1-201ENST00000375001 Q6ZT83 130 aa16.41■□□□□ 0.22
COL15A1-201ENST00000375001 AGMATQ9BSE5 352 aa16.41■□□□□ 0.22
COL15A1-201ENST00000375001 CELA3AP09093 270 aa16.41■□□□□ 0.22
COL15A1-201ENST00000375001 PSG7Q13046 419 aa16.41■□□□□ 0.22
COL15A1-201ENST00000375001 GGTLC1Q9BX51 225 aa16.41■□□□□ 0.22
COL15A1-201ENST00000375001 NUP35Q8NFH5 326 aa16.41■□□□□ 0.22
COL15A1-201ENST00000375001 VWCEQ96DN2 955 aa16.41■□□□□ 0.22
COL15A1-201ENST00000375001 PIMREGQ9BSJ6 248 aa16.41■□□□□ 0.22
COL15A1-201ENST00000375001 PAX4O43316 350 aa16.4■□□□□ 0.22
COL15A1-201ENST00000375001 JPT2Q9H910 190 aa16.4■□□□□ 0.22
COL15A1-201ENST00000375001 TNS1Q9HBL0 1735 aaKnown RBP16.4■□□□□ 0.22
COL15A1-201ENST00000375001 DOCK4Q8N1I0 1966 aa16.4■□□□□ 0.22
COL15A1-201ENST00000375001 TMEM8BA6NDV4 472 aa16.4■□□□□ 0.22
COL15A1-201ENST00000375001 TCRAP04437 139 aa16.4■□□□□ 0.22
COL15A1-201ENST00000375001 PRB3Q04118 309 aaPredicted RBP16.4■□□□□ 0.22
COL15A1-201ENST00000375001 ATP1A1-AS1Q5TC04 95 aa16.4■□□□□ 0.22
COL15A1-201ENST00000375001 RASL11AQ6T310 242 aa16.4■□□□□ 0.22
COL15A1-201ENST00000375001 LYZL1Q6UWQ5 148 aa16.4■□□□□ 0.22
COL15A1-201ENST00000375001 LYZL4Q96KX0 146 aa16.4■□□□□ 0.22
COL15A1-201ENST00000375001 PSME4Q14997 1843 aa16.4■□□□□ 0.22
COL15A1-201ENST00000375001 CCL3L1P16619 93 aa16.4■□□□□ 0.22
COL15A1-201ENST00000375001 SUPT4H1P63272 117 aaKnown RBP16.4■□□□□ 0.22
COL15A1-201ENST00000375001 RALGAPA2Q2PPJ7 1873 aa16.39■□□□□ 0.22
COL15A1-201ENST00000375001 FOXH1O75593 365 aa16.39■□□□□ 0.22
COL15A1-201ENST00000375001 ARHGEF17Q96PE2 2063 aaPredicted RBP16.39■□□□□ 0.21
COL15A1-201ENST00000375001 FLVCR1-AS1Q8TAF5 88 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 MRPL27Q9P0M9 148 aaKnown RBP16.39■□□□□ 0.21
COL15A1-201ENST00000375001 TFF1P04155 84 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 WFDC12Q8WWY7 111 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 ITGB1BP1O14713 200 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 PRCDQ00LT1 54 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 PPP1R32Q7Z5V6 425 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 ABCA1O95477 2261 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 MLNRO43193 412 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 YPEL1O60688 119 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 CDKN1AP38936 164 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 MORN2Q502X0 79 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 PLEKHB2Q96CS7 222 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 YPEL2Q96QA6 119 aa16.39■□□□□ 0.21
COL15A1-201ENST00000375001 SMAD7O15105 426 aaKnown RBP16.38■□□□□ 0.21
COL15A1-201ENST00000375001 A0A0G2JMZ2 1700 aa16.38■□□□□ 0.21
COL15A1-201ENST00000375001 LRRC37A2A6NM11 1700 aa16.38■□□□□ 0.21
COL15A1-201ENST00000375001 LINC00271P0C7V0 271 aa16.38■□□□□ 0.21
COL15A1-201ENST00000375001 MST1P26927 711 aa16.38■□□□□ 0.21
COL15A1-201ENST00000375001 TP53BP1Q12888 1972 aaPredicted RBP16.38■□□□□ 0.21
COL15A1-201ENST00000375001 IGKV2-40A0A087WW87 121 aaPredicted RBP16.38■□□□□ 0.21
COL15A1-201ENST00000375001 VWC2LB2RUY7 222 aa16.38■□□□□ 0.21
COL15A1-201ENST00000375001 B9A039 149 aa16.38■□□□□ 0.21
COL15A1-201ENST00000375001 IGKV2D-40P01614 121 aaPredicted RBP16.38■□□□□ 0.21
COL15A1-201ENST00000375001 EXOC3-AS1Q8N2X6 119 aa16.38■□□□□ 0.21
COL15A1-201ENST00000375001 STPG4Q8N801 248 aa16.38■□□□□ 0.21
COL15A1-201ENST00000375001 IMMP1LQ96LU5 166 aa16.38■□□□□ 0.21
COL15A1-201ENST00000375001 LINC00312Q9Y6C7 94 aa16.38■□□□□ 0.21
COL15A1-201ENST00000375001 ZNF497Q6ZNH5 498 aa16.37■□□□□ 0.21
COL15A1-201ENST00000375001 C8orf46Q8TAG6 207 aa16.37■□□□□ 0.21
COL15A1-201ENST00000375001 WBP1Q96G27 269 aa16.37■□□□□ 0.21
COL15A1-201ENST00000375001 ADARB2-AS1A8MUL3 147 aa16.37■□□□□ 0.21
COL15A1-201ENST00000375001 ABHD17AQ96GS6 310 aa16.37■□□□□ 0.21
COL15A1-201ENST00000375001 C20orf144Q9BQM9 153 aa16.37■□□□□ 0.21
COL15A1-201ENST00000375001 DUTP33316 252 aaKnown RBP16.36■□□□□ 0.21
COL15A1-201ENST00000375001 SIGLEC12Q96PQ1 595 aa16.36■□□□□ 0.21
COL15A1-201ENST00000375001 PF4P02776 101 aa16.36■□□□□ 0.21
COL15A1-201ENST00000375001 TMEM158Q8WZ71 300 aa16.36■□□□□ 0.21
COL15A1-201ENST00000375001 LINC01549A6NIU2 74 aa16.36■□□□□ 0.21
COL15A1-201ENST00000375001 NBR2O15453 112 aa16.36■□□□□ 0.21
COL15A1-201ENST00000375001 SPANXA1Q9NS26 97 aa16.36■□□□□ 0.21
COL15A1-201ENST00000375001 GVINP1Q7Z2Y8 2422 aa16.36■□□□□ 0.21
COL15A1-201ENST00000375001 FREM3P0C091 2139 aa16.36■□□□□ 0.21
COL15A1-201ENST00000375001 ATP5J2P56134 94 aa16.35■□□□□ 0.21
COL15A1-201ENST00000375001 CEP250Q9BV73 2442 aa16.35■□□□□ 0.21
COL15A1-201ENST00000375001 A0A1B0GUS0 222 aa16.35■□□□□ 0.21
COL15A1-201ENST00000375001 PMS2P5A8MQ11 134 aa16.35■□□□□ 0.21
COL15A1-201ENST00000375001 CD24P25063 80 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms