RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 HSPB11Q9Y547 144 aa11.38□□□□□ -0.59
HSPG2-201ENST00000374673 IGHV7-4-1A0A0J9YVY3 117 aa11.37□□□□□ -0.59
HSPG2-201ENST00000374673 WI2-2373I1.2A0A1W2PRP0 233 aa11.37□□□□□ -0.59
HSPG2-201ENST00000374673 G3V3Q6 166 aa11.37□□□□□ -0.59
HSPG2-201ENST00000374673 ZNF207O43670 478 aaKnown RBP11.37□□□□□ -0.59
HSPG2-201ENST00000374673 CFDP00746 253 aaPredicted RBP11.37□□□□□ -0.59
HSPG2-201ENST00000374673 IL4P05112 153 aa11.37□□□□□ -0.59
HSPG2-201ENST00000374673 OR5C1Q8NGR4 320 aa11.37□□□□□ -0.59
HSPG2-201ENST00000374673 DYNLRB2Q8TF09 96 aa11.37□□□□□ -0.59
HSPG2-201ENST00000374673 RNF125Q96EQ8 232 aa11.37□□□□□ -0.59
HSPG2-201ENST00000374673 ZMAT5Q9UDW3 170 aaKnown RBP11.37□□□□□ -0.59
HSPG2-201ENST00000374673 SMPXQ9UHP9 88 aa11.37□□□□□ -0.59
HSPG2-201ENST00000374673 WDR83OSQ9Y284 106 aa11.37□□□□□ -0.59
HSPG2-201ENST00000374673 PKD1L1Q8TDX9 2849 aa11.37□□□□□ -0.59
HSPG2-201ENST00000374673 CRYBB3P26998 211 aa11.36□□□□□ -0.59
HSPG2-201ENST00000374673 USF2Q15853 346 aaPredicted RBP11.36□□□□□ -0.59
HSPG2-201ENST00000374673 DEFB114Q30KQ6 69 aa11.36□□□□□ -0.59
HSPG2-201ENST00000374673 CYP2G1PQ6ZSU1 146 aa11.36□□□□□ -0.59
HSPG2-201ENST00000374673 METTL26Q96S19 204 aa11.36□□□□□ -0.59
HSPG2-201ENST00000374673 MLXQ9UH92 298 aa11.36□□□□□ -0.59
HSPG2-201ENST00000374673 NOTCH3Q9UM47 2321 aa11.36□□□□□ -0.59
HSPG2-201ENST00000374673 UBE2L5PA0A1B0GUS4 154 aa11.35□□□□□ -0.59
HSPG2-201ENST00000374673 CHEK1O14757 476 aa11.35□□□□□ -0.59
HSPG2-201ENST00000374673 NPPCP23582 126 aa11.35□□□□□ -0.59
HSPG2-201ENST00000374673 BMI1P35226 326 aa11.35□□□□□ -0.59
HSPG2-201ENST00000374673 KRTAP10-11P60412 298 aa11.35□□□□□ -0.59
HSPG2-201ENST00000374673 SELENOTP62341 195 aa11.35□□□□□ -0.59
HSPG2-201ENST00000374673 OR2F1Q13607 317 aa11.35□□□□□ -0.59
HSPG2-201ENST00000374673 BTNL8Q6UX41 500 aa11.35□□□□□ -0.59
HSPG2-201ENST00000374673 TMEM182Q6ZP80 229 aaPredicted RBP11.35□□□□□ -0.59
HSPG2-201ENST00000374673 BPIFCQ8NFQ6 507 aa11.35□□□□□ -0.59
HSPG2-201ENST00000374673 AQP10Q96PS8 301 aa11.35□□□□□ -0.59
HSPG2-201ENST00000374673 MGST2Q99735 147 aa11.35□□□□□ -0.59
HSPG2-201ENST00000374673 VSIRQ9H7M9 311 aa11.35□□□□□ -0.59
HSPG2-201ENST00000374673 AGPAT2O15120 278 aa11.34□□□□□ -0.59
HSPG2-201ENST00000374673 HNRNPCP07910 306 aaKnown RBP eCLIP11.34□□□□□ -0.59
HSPG2-201ENST00000374673 GATA2P23769 480 aaPredicted RBP11.34□□□□□ -0.59
HSPG2-201ENST00000374673 CD300EQ496F6 205 aaPredicted RBP11.34□□□□□ -0.59
HSPG2-201ENST00000374673 LCN12Q6JVE5 192 aa11.34□□□□□ -0.59
HSPG2-201ENST00000374673 ZNF546Q86UE3 836 aa11.34□□□□□ -0.59
HSPG2-201ENST00000374673 RHPN1-AS1Q9BWJ2 59 aa11.34□□□□□ -0.59
HSPG2-201ENST00000374673 RABAC1Q9UI14 185 aa11.34□□□□□ -0.59
HSPG2-201ENST00000374673 U3KQE9 123 aa11.34□□□□□ -0.59
HSPG2-201ENST00000374673 MGAM2Q2M2H8 2515 aa11.34□□□□□ -0.59
HSPG2-201ENST00000374673 FXYD6-FXYD2A0A087WZ82 144 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 IGHV3-49A0A0A0MS15 119 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 A0A1W2PS18 150 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 MPDU1O75352 247 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 DFFBO76075 338 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 APOHP02749 345 aaPredicted RBP11.33□□□□□ -0.6
HSPG2-201ENST00000374673 NUP62P37198 522 aaPredicted RBP11.33□□□□□ -0.6
HSPG2-201ENST00000374673 PLP1P60201 277 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 LYZP61626 148 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 RAB31Q13636 194 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 CLINT1Q14677 625 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 ST8SIA2Q92186 375 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 NARS2Q96I59 477 aaKnown RBP11.33□□□□□ -0.6
HSPG2-201ENST00000374673 ATP5SQ99766 215 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 PBDC1Q9BVG4 233 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 TMEM231Q9H6L2 316 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 SLC45A2Q9UMX9 530 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 TNFSF18Q9UNG2 199 aa11.33□□□□□ -0.6
HSPG2-201ENST00000374673 ZNF256Q9Y2P7 627 aaPredicted RBP11.33□□□□□ -0.6
HSPG2-201ENST00000374673 IGHV3OR16-13A0A075B7E8 117 aa11.32□□□□□ -0.6
HSPG2-201ENST00000374673 IGHV3-74A0A0B4J1X5 117 aa11.32□□□□□ -0.6
HSPG2-201ENST00000374673 TRAV25A0A0B4J276 109 aa11.32□□□□□ -0.6
HSPG2-201ENST00000374673 RNF222A6NCQ9 220 aa11.32□□□□□ -0.6
HSPG2-201ENST00000374673 IZUMO1RA6ND01 250 aa11.32□□□□□ -0.6
HSPG2-201ENST00000374673 FGF7P21781 194 aa11.32□□□□□ -0.6
HSPG2-201ENST00000374673 CAMLGP49069 296 aa11.32□□□□□ -0.6
HSPG2-201ENST00000374673 EIF2B2P49770 351 aaKnown RBP11.32□□□□□ -0.6
HSPG2-201ENST00000374673 OPCMLQ14982 345 aa11.32□□□□□ -0.6
HSPG2-201ENST00000374673 TMEM61Q8N0U2 210 aa11.32□□□□□ -0.6
HSPG2-201ENST00000374673 ST6GAL2Q96JF0 529 aa11.32□□□□□ -0.6
HSPG2-201ENST00000374673 RNF2Q99496 336 aa11.32□□□□□ -0.6
HSPG2-201ENST00000374673 GGTLC1Q9BX51 225 aa11.32□□□□□ -0.6
HSPG2-201ENST00000374673 WDR61Q9GZS3 305 aaKnown RBP11.32□□□□□ -0.6
HSPG2-201ENST00000374673 hCG_2014768A0A024R1R8 64 aa11.31□□□□□ -0.6
HSPG2-201ENST00000374673 SMLR1H3BR10 107 aa11.31□□□□□ -0.6
HSPG2-201ENST00000374673 CD5P06127 495 aa11.31□□□□□ -0.6
HSPG2-201ENST00000374673 LINC00869P0C866 280 aa11.31□□□□□ -0.6
HSPG2-201ENST00000374673 GP9P14770 177 aa11.31□□□□□ -0.6
HSPG2-201ENST00000374673 PXDC1Q5TGL8 231 aa11.31□□□□□ -0.6
HSPG2-201ENST00000374673 FAM90A2PQ658T7 463 aa11.31□□□□□ -0.6
HSPG2-201ENST00000374673 LAMTOR1Q6IAA8 161 aa11.31□□□□□ -0.6
HSPG2-201ENST00000374673 INO80EQ8NBZ0 244 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-201ENST00000374673 GRAMD2BQ96HH9 432 aa11.31□□□□□ -0.6
HSPG2-201ENST00000374673 NPCDR1Q9BY65 106 aa11.31□□□□□ -0.6
HSPG2-201ENST00000374673 SMIM3Q9BZL3 60 aa11.31□□□□□ -0.6
HSPG2-201ENST00000374673 SELENOKQ9Y6D0 94 aa11.31□□□□□ -0.6
HSPG2-201ENST00000374673 ZNF785A8K8V0 405 aa11.3□□□□□ -0.6
HSPG2-201ENST00000374673 TSPAN4O14817 238 aa11.3□□□□□ -0.6
HSPG2-201ENST00000374673 BUB3O43684 328 aa11.3□□□□□ -0.6
HSPG2-201ENST00000374673 RPL29P47914 159 aaKnown RBP11.3□□□□□ -0.6
HSPG2-201ENST00000374673 PRR20EP86478 221 aa11.3□□□□□ -0.6
HSPG2-201ENST00000374673 PRR20CP86479 221 aa11.3□□□□□ -0.6
HSPG2-201ENST00000374673 PRR20DP86480 221 aa11.3□□□□□ -0.6
HSPG2-201ENST00000374673 PRR20BP86481 221 aa11.3□□□□□ -0.6
HSPG2-201ENST00000374673 PRR20AP86496 221 aa11.3□□□□□ -0.6
HSPG2-201ENST00000374673 C16orf54Q6UWD8 224 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms