RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 MMDQ15546 238 aa9.64□□□□□ -0.87
HMGCL-202ENST00000374487 PATE2Q6UY27 113 aa9.64□□□□□ -0.87
HMGCL-202ENST00000374487 OR1B1Q8NGR6 318 aa9.64□□□□□ -0.87
HMGCL-202ENST00000374487 SRSF12Q8WXF0 261 aaKnown RBP9.64□□□□□ -0.87
HMGCL-202ENST00000374487 OR51M1Q9H341 326 aa9.64□□□□□ -0.87
HMGCL-202ENST00000374487 SLC17A3O00476 420 aa9.64□□□□□ -0.87
HMGCL-202ENST00000374487 FCN1O00602 326 aa9.64□□□□□ -0.87
HMGCL-202ENST00000374487 CRYGCP07315 174 aa9.64□□□□□ -0.87
HMGCL-202ENST00000374487 PYYP10082 97 aa9.64□□□□□ -0.87
HMGCL-202ENST00000374487 TMEM116Q8NCL8 245 aa9.64□□□□□ -0.87
HMGCL-202ENST00000374487 OR11H6Q8NGC7 330 aa9.64□□□□□ -0.87
HMGCL-202ENST00000374487 TRAPPC1Q9Y5R8 145 aa9.64□□□□□ -0.87
HMGCL-202ENST00000374487 F11RQ9Y624 299 aaKnown RBP9.64□□□□□ -0.87
HMGCL-202ENST00000374487 TEX22C9J3V5 150 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 M0R1W7 72 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 FABP1P07148 127 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 OR5I1Q13606 314 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 PVRIGQ6DKI7 326 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 TMEM183AQ8IXX5 376 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 TRGV9Q99603 122 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 IL36BQ9NZH7 164 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 NAV3Q8IVL0 2385 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 OVOL3O00110 214 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 LDLRAD2Q5SZI1 272 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 RUSC1-AS1Q66K80 236 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 DTX2Q86UW9 622 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 LURAP1LQ8IV03 231 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 CIARTQ8N365 385 aaPredicted RBP9.63□□□□□ -0.87
HMGCL-202ENST00000374487 STXBP6Q8NFX7 210 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 MBD6Q96DN6 1003 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 FOXC2Q99958 501 aa9.63□□□□□ -0.87
HMGCL-202ENST00000374487 HIVEP1P15822 2718 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 A0A1W2PRD5 423 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 A0A1W2PRF3 423 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 A0A1W2PRM7 423 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 PLXNB1O43157 2135 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 MGST1P10620 155 aaKnown RBP9.62□□□□□ -0.87
HMGCL-202ENST00000374487 PRTN3P24158 256 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 GPR6P46095 362 aaPredicted RBP9.62□□□□□ -0.87
HMGCL-202ENST00000374487 LGALS4P56470 323 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 KLRD1Q13241 179 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 HES1Q14469 280 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 RPEL1Q2QD12 228 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 PYY3Q5JQD4 70 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 GSN-AS1Q9NRJ2 163 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 ITPR3Q14573 2671 aa9.62□□□□□ -0.87
HMGCL-202ENST00000374487 NBR2O15453 112 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 HYPMO75409 117 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 IGHV4-39P01824 125 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 SNRPCP09234 159 aaKnown RBP9.61□□□□□ -0.87
HMGCL-202ENST00000374487 CD24P25063 80 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 Q5PR19 223 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 LHFPL4Q7Z7J7 247 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 PACRGQ96M98 296 aaPredicted RBP9.61□□□□□ -0.87
HMGCL-202ENST00000374487 HIST1H2BLQ99880 126 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 TRAV9-1A0A075B6T8 112 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 CNN1P51911 297 aaKnown RBP9.61□□□□□ -0.87
HMGCL-202ENST00000374487 ATP5J2P56134 94 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 MAPK1IP1LQ8NDC0 245 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 FXYD5Q96DB9 178 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 SMR3AQ99954 134 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 WNT10AQ9GZT5 417 aa9.61□□□□□ -0.87
HMGCL-202ENST00000374487 BEX4Q9NWD9 120 aaPredicted RBP9.61□□□□□ -0.87
HMGCL-202ENST00000374487 RPL15P61313 204 aaKnown RBP9.6□□□□□ -0.87
HMGCL-202ENST00000374487 RANP62826 216 aaKnown RBP9.6□□□□□ -0.87
HMGCL-202ENST00000374487 SSX2Q16385 188 aa9.6□□□□□ -0.87
HMGCL-202ENST00000374487 COA6Q5JTJ3 125 aaKnown RBP9.6□□□□□ -0.87
HMGCL-202ENST00000374487 BLNKQ8WV28 456 aa9.6□□□□□ -0.87
HMGCL-202ENST00000374487 Q96MF0 132 aa9.6□□□□□ -0.87
HMGCL-202ENST00000374487 SRSF8Q9BRL6 282 aaKnown RBP9.6□□□□□ -0.87
HMGCL-202ENST00000374487 RNASE7Q9H1E1 156 aaKnown RBP9.6□□□□□ -0.87
HMGCL-202ENST00000374487 GSX1Q9H4S2 264 aaPredicted RBP9.6□□□□□ -0.87
HMGCL-202ENST00000374487 V9GYV3 84 aa9.6□□□□□ -0.87
HMGCL-202ENST00000374487 TAS2R60P59551 318 aa9.6□□□□□ -0.87
HMGCL-202ENST00000374487 ZNF329Q86UD4 541 aa9.6□□□□□ -0.87
HMGCL-202ENST00000374487 CFHR4Q92496 578 aa9.6□□□□□ -0.87
HMGCL-202ENST00000374487 LINC00479Q96M42 142 aa9.6□□□□□ -0.87
HMGCL-202ENST00000374487 RASL11BQ9BPW5 248 aa9.6□□□□□ -0.87
HMGCL-202ENST00000374487 CDC42EP3Q9UKI2 254 aa9.6□□□□□ -0.87
HMGCL-202ENST00000374487 DMRT1Q9Y5R6 373 aa9.6□□□□□ -0.87
HMGCL-202ENST00000374487 ODF3BA8MYP8 253 aa9.59□□□□□ -0.87
HMGCL-202ENST00000374487 GCGP01275 180 aa9.59□□□□□ -0.87
HMGCL-202ENST00000374487 RPL19P84098 196 aaKnown RBP9.59□□□□□ -0.87
HMGCL-202ENST00000374487 PAX2Q02962 417 aa9.59□□□□□ -0.87
HMGCL-202ENST00000374487 FXYD3Q14802 87 aa9.59□□□□□ -0.87
HMGCL-202ENST00000374487 CCDC144NLQ6NUI1 221 aa9.59□□□□□ -0.87
HMGCL-202ENST00000374487 C1orf122Q6ZSJ8 110 aa9.59□□□□□ -0.87
HMGCL-202ENST00000374487 VMO1Q7Z5L0 202 aa9.59□□□□□ -0.87
HMGCL-202ENST00000374487 OSTCQ9NRP0 149 aa9.59□□□□□ -0.87
HMGCL-202ENST00000374487 SERTAD4Q9NUC0 356 aa9.59□□□□□ -0.87
HMGCL-202ENST00000374487 I3L2K1 104 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 PEX7O00628 323 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 ISLRO14498 428 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 NBEAP1P0C6P0 100 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 PSG1P11464 419 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 LYZP61626 148 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 IBA57Q5T440 356 aaKnown RBP9.58□□□□□ -0.88
HMGCL-202ENST00000374487 OR8I2Q8N0Y5 310 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 NHLRC2Q8NBF2 726 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 NPBQ8NG41 125 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms