RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 SYNGR2O43760 224 aa14.14□□□□□ -0.15
TRAPPC3-204ENST00000373166 APOHP02749 345 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC3-204ENST00000373166 RPP30P78346 268 aaKnown RBP14.14□□□□□ -0.15
TRAPPC3-204ENST00000373166 GATAD1Q8WUU5 269 aa14.14□□□□□ -0.15
TRAPPC3-204ENST00000373166 SLC35E1Q96K37 410 aa14.14□□□□□ -0.15
TRAPPC3-204ENST00000373166 MAGT1Q9H0U3 335 aa14.14□□□□□ -0.15
TRAPPC3-204ENST00000373166 C20orf85Q9H1P6 137 aa14.14□□□□□ -0.15
TRAPPC3-204ENST00000373166 PAIP2BQ9ULR5 123 aaKnown RBP14.14□□□□□ -0.15
TRAPPC3-204ENST00000373166 KIAA1109Q2LD37 5005 aa14.13□□□□□ -0.15
TRAPPC3-204ENST00000373166 PLA2G10O15496 165 aa14.13□□□□□ -0.15
TRAPPC3-204ENST00000373166 ADAP1O75689 374 aa14.13□□□□□ -0.15
TRAPPC3-204ENST00000373166 GPX4P36969 197 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC3-204ENST00000373166 CMC4P56277 68 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC3-204ENST00000373166 RPL11P62913 178 aaKnown RBP14.13□□□□□ -0.15
TRAPPC3-204ENST00000373166 FAM90A2PQ658T7 463 aa14.13□□□□□ -0.15
TRAPPC3-204ENST00000373166 GBGT1Q8N5D6 347 aa14.13□□□□□ -0.15
TRAPPC3-204ENST00000373166 S100ZQ8WXG8 99 aa14.13□□□□□ -0.15
TRAPPC3-204ENST00000373166 GRAMD2BQ96HH9 432 aa14.13□□□□□ -0.15
TRAPPC3-204ENST00000373166 DFFBO76075 338 aa14.12□□□□□ -0.15
TRAPPC3-204ENST00000373166 CRYBB3P26998 211 aa14.12□□□□□ -0.15
TRAPPC3-204ENST00000373166 A6NHS1 94 aa14.11□□□□□ -0.15
TRAPPC3-204ENST00000373166 DNASE2O00115 360 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC3-204ENST00000373166 WRBO00258 174 aa14.11□□□□□ -0.15
TRAPPC3-204ENST00000373166 TOMM40O96008 361 aa14.11□□□□□ -0.15
TRAPPC3-204ENST00000373166 IL4P05112 153 aa14.11□□□□□ -0.15
TRAPPC3-204ENST00000373166 RD3LP0DJH9 198 aa14.11□□□□□ -0.15
TRAPPC3-204ENST00000373166 P2RY1P47900 373 aa14.11□□□□□ -0.15
TRAPPC3-204ENST00000373166 RYR1P21817 5038 aa14.11□□□□□ -0.15
TRAPPC3-204ENST00000373166 TRAV2A0A0B4J234 112 aa14.1□□□□□ -0.15
TRAPPC3-204ENST00000373166 ZFP92A6NM28 416 aa14.1□□□□□ -0.15
TRAPPC3-204ENST00000373166 TCRBP04435 133 aa14.1□□□□□ -0.15
TRAPPC3-204ENST00000373166 FABP1P07148 127 aa14.1□□□□□ -0.15
TRAPPC3-204ENST00000373166 HNRNPCP07910 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
TRAPPC3-204ENST00000373166 RPL35AP18077 110 aaKnown RBP14.1□□□□□ -0.15
TRAPPC3-204ENST00000373166 GAMTQ14353 236 aa14.1□□□□□ -0.15
TRAPPC3-204ENST00000373166 LILRB2Q8N423 598 aa14.1□□□□□ -0.15
TRAPPC3-204ENST00000373166 MFFQ9GZY8 342 aa14.1□□□□□ -0.15
TRAPPC3-204ENST00000373166 MS4A6AQ9H2W1 248 aa14.1□□□□□ -0.15
TRAPPC3-204ENST00000373166 MPTX1A8MV57 137 aa14.09□□□□□ -0.15
TRAPPC3-204ENST00000373166 NKX2-1P43699 371 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC3-204ENST00000373166 EIF2B2P49770 351 aaKnown RBP14.09□□□□□ -0.15
TRAPPC3-204ENST00000373166 USF2Q15853 346 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC3-204ENST00000373166 SPANXN5Q5MJ07 72 aa14.09□□□□□ -0.15
TRAPPC3-204ENST00000373166 MITD1Q8WV92 249 aa14.09□□□□□ -0.15
TRAPPC3-204ENST00000373166 MAP6D1Q9H9H5 199 aa14.09□□□□□ -0.15
TRAPPC3-204ENST00000373166 NUDT15Q9NV35 164 aa14.09□□□□□ -0.15
TRAPPC3-204ENST00000373166 PTTG2Q9NZH5 202 aa14.09□□□□□ -0.15
TRAPPC3-204ENST00000373166 RABAC1Q9UI14 185 aa14.09□□□□□ -0.15
TRAPPC3-204ENST00000373166 STRAPQ9Y3F4 350 aaKnown RBP14.09□□□□□ -0.15
TRAPPC3-204ENST00000373166 TRAV6A0A075B6T7 132 aa14.08□□□□□ -0.16
TRAPPC3-204ENST00000373166 H3BP45 60 aa14.08□□□□□ -0.16
TRAPPC3-204ENST00000373166 ID3Q02535 119 aa14.08□□□□□ -0.16
TRAPPC3-204ENST00000373166 IAH1Q2TAA2 248 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC3-204ENST00000373166 MZT2BQ6NZ67 158 aa14.08□□□□□ -0.16
TRAPPC3-204ENST00000373166 APRG1Q8IVJ8 170 aa14.08□□□□□ -0.16
TRAPPC3-204ENST00000373166 STXBP6Q8NFX7 210 aa14.08□□□□□ -0.16
TRAPPC3-204ENST00000373166 OR51G1Q8NGK1 321 aa14.08□□□□□ -0.16
TRAPPC3-204ENST00000373166 OR4D5Q8NGN0 318 aa14.08□□□□□ -0.16
TRAPPC3-204ENST00000373166 WDR12Q9GZL7 423 aaKnown RBP14.08□□□□□ -0.16
TRAPPC3-204ENST00000373166 HELTA6NFD8 242 aa14.07□□□□□ -0.16
TRAPPC3-204ENST00000373166 PSG1P11464 419 aa14.07□□□□□ -0.16
TRAPPC3-204ENST00000373166 NUP62P37198 522 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC3-204ENST00000373166 POLR2GP62487 172 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRAPPC3-204ENST00000373166 C11orf45Q8TAV5 145 aa14.07□□□□□ -0.16
TRAPPC3-204ENST00000373166 RNF125Q96EQ8 232 aa14.07□□□□□ -0.16
TRAPPC3-204ENST00000373166 U3KQE9 123 aa14.07□□□□□ -0.16
TRAPPC3-204ENST00000373166 FAM240BA0A1B0GVZ2 78 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 SSSCA1O60232 199 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 SCGB1D2O95969 90 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 TCTAP57738 103 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 PRR20EP86478 221 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 PRR20CP86479 221 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 PRR20DP86480 221 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 PRR20BP86481 221 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 PRR20AP86496 221 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 ZNF846Q147U1 533 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 RARRES2Q99969 163 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 PBDC1Q9BVG4 233 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 PSENENQ9NZ42 101 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 FBXL17Q9UF56 701 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 PFDN2Q9UHV9 154 aa14.06□□□□□ -0.16
TRAPPC3-204ENST00000373166 IGKV1D-37A0A075B6S9 117 aa14.05□□□□□ -0.16
TRAPPC3-204ENST00000373166 NANOS2P60321 138 aaKnown RBP14.05□□□□□ -0.16
TRAPPC3-204ENST00000373166 C16orf54Q6UWD8 224 aa14.05□□□□□ -0.16
TRAPPC3-204ENST00000373166 ZBTB8BQ8NAP8 495 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC3-204ENST00000373166 C2CD4CQ8TF44 421 aa14.05□□□□□ -0.16
TRAPPC3-204ENST00000373166 GLMPQ8WWB7 406 aa14.05□□□□□ -0.16
TRAPPC3-204ENST00000373166 TRGV9Q99603 122 aa14.05□□□□□ -0.16
TRAPPC3-204ENST00000373166 CSTL1Q9H114 145 aa14.05□□□□□ -0.16
TRAPPC3-204ENST00000373166 PRSS46E5RG02 174 aa14.04□□□□□ -0.16
TRAPPC3-204ENST00000373166 H2AFB2P0C5Z0 115 aa14.04□□□□□ -0.16
TRAPPC3-204ENST00000373166 AP2S1P53680 142 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC3-204ENST00000373166 DEFB131AP59861 70 aa14.04□□□□□ -0.16
TRAPPC3-204ENST00000373166 LYZP61626 148 aa14.04□□□□□ -0.16
TRAPPC3-204ENST00000373166 ZNF90Q03938 601 aa14.04□□□□□ -0.16
TRAPPC3-204ENST00000373166 AKR1C1Q04828 323 aa14.04□□□□□ -0.16
TRAPPC3-204ENST00000373166 ASAH1Q13510 395 aa14.04□□□□□ -0.16
TRAPPC3-204ENST00000373166 ZNF124Q15973 351 aa14.04□□□□□ -0.16
TRAPPC3-204ENST00000373166 OR8G2PQ6IF36 304 aa14.04□□□□□ -0.16
TRAPPC3-204ENST00000373166 THAP8Q8NA92 274 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms