RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 NBR2O15453 112 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 PRTN3P24158 256 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 MYCNOSP40205 109 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 TAS2R60P59551 318 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 SLC35B1P78383 322 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 SERTAD4Q9NUC0 356 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 NUPR1O60356 82 aa14.87□□□□□ -0.03
USP49-202ENST00000373010 IGLC1P0CG04 106 aa14.87□□□□□ -0.03
USP49-202ENST00000373010 ITPR1Q14643 2758 aa14.87□□□□□ -0.03
USP49-202ENST00000373010 PSG1P11464 419 aa14.87□□□□□ -0.03
USP49-202ENST00000373010 CEACAM3P40198 252 aa14.87□□□□□ -0.03
USP49-202ENST00000373010 LYZP61626 148 aa14.87□□□□□ -0.03
USP49-202ENST00000373010 HES1Q14469 280 aa14.87□□□□□ -0.03
USP49-202ENST00000373010 GBGT1Q8N5D6 347 aa14.87□□□□□ -0.03
USP49-202ENST00000373010 STXBP6Q8NFX7 210 aa14.87□□□□□ -0.03
USP49-202ENST00000373010 CA1P00915 261 aaPredicted RBP14.86□□□□□ -0.03
USP49-202ENST00000373010 JOSD1Q15040 202 aaPredicted RBP14.86□□□□□ -0.03
USP49-202ENST00000373010 SSX2Q16385 188 aa14.86□□□□□ -0.03
USP49-202ENST00000373010 C9orf152Q5JTZ5 239 aa14.86□□□□□ -0.03
USP49-202ENST00000373010 SGK494Q96LW2 274 aa14.86□□□□□ -0.03
USP49-202ENST00000373010 PGPA6NDG6 321 aa14.86□□□□□ -0.03
USP49-202ENST00000373010 SLC25A5P05141 298 aaKnown RBP14.86□□□□□ -0.03
USP49-202ENST00000373010 NBEAP1P0C6P0 100 aa14.86□□□□□ -0.03
USP49-202ENST00000373010 GZMBP10144 247 aa14.86□□□□□ -0.03
USP49-202ENST00000373010 GP9P14770 177 aa14.86□□□□□ -0.03
USP49-202ENST00000373010 ZFP36P26651 326 aaKnown RBP14.86□□□□□ -0.03
USP49-202ENST00000373010 GPR6P46095 362 aaPredicted RBP14.86□□□□□ -0.03
USP49-202ENST00000373010 BAGE2Q86Y30 109 aa14.86□□□□□ -0.03
USP49-202ENST00000373010 DYNAPQ8N1N2 210 aa14.86□□□□□ -0.03
USP49-202ENST00000373010 FAM168AQ92567 244 aa14.86□□□□□ -0.03
USP49-202ENST00000373010 RPH3ALQ9UNE2 315 aa14.86□□□□□ -0.03
USP49-202ENST00000373010 TRAV20A0A0B4J274 112 aa14.85□□□□□ -0.03
USP49-202ENST00000373010 SNURFLB1AK76 121 aa14.85□□□□□ -0.03
USP49-202ENST00000373010 PLP1P60201 277 aa14.85□□□□□ -0.03
USP49-202ENST00000373010 VMO1Q7Z5L0 202 aa14.85□□□□□ -0.03
USP49-202ENST00000373010 TMEM18Q96B42 140 aa14.85□□□□□ -0.03
USP49-202ENST00000373010 WNK2Q9Y3S1 2297 aa14.85□□□□□ -0.03
USP49-202ENST00000373010 ZNF705GA8MUZ8 300 aaPredicted RBP14.85□□□□□ -0.03
USP49-202ENST00000373010 CX3CL1P78423 397 aa14.85□□□□□ -0.03
USP49-202ENST00000373010 DNLZQ5SXM8 178 aa14.85□□□□□ -0.03
USP49-202ENST00000373010 UBTD1Q9HAC8 227 aa14.85□□□□□ -0.03
USP49-202ENST00000373010 EPDR1Q9UM22 224 aa14.85□□□□□ -0.03
USP49-202ENST00000373010 HIGD1AQ9Y241 93 aa14.85□□□□□ -0.03
USP49-202ENST00000373010 K7EIM0 57 aa14.84□□□□□ -0.03
USP49-202ENST00000373010 KLF17Q5JT82 389 aaPredicted RBP14.84□□□□□ -0.03
USP49-202ENST00000373010 NPBQ8NG41 125 aa14.84□□□□□ -0.03
USP49-202ENST00000373010 MED13LQ71F56 2210 aa14.84□□□□□ -0.03
USP49-202ENST00000373010 NDUFA3O95167 84 aa14.84□□□□□ -0.03
USP49-202ENST00000373010 IGKV1-17P01599 117 aa14.84□□□□□ -0.03
USP49-202ENST00000373010 UQCRFS1P47985 274 aa14.84□□□□□ -0.03
USP49-202ENST00000373010 RASL11BQ9BPW5 248 aa14.84□□□□□ -0.03
USP49-202ENST00000373010 SMIM27A0A1W2PRY6 76 aa14.83□□□□□ -0.04
USP49-202ENST00000373010 OR5R1Q8NH85 324 aa14.83□□□□□ -0.04
USP49-202ENST00000373010 SRSF8Q9BRL6 282 aaKnown RBP14.83□□□□□ -0.04
USP49-202ENST00000373010 PRORYQ9H606 182 aa14.83□□□□□ -0.04
USP49-202ENST00000373010 TP53TG3Q9ULZ0 132 aa14.83□□□□□ -0.04
USP49-202ENST00000373010 S4R3C0 116 aa14.83□□□□□ -0.04
USP49-202ENST00000373010 PRR27Q6MZM9 219 aa14.83□□□□□ -0.04
USP49-202ENST00000373010 PRO1933Q9H354 126 aa14.83□□□□□ -0.04
USP49-202ENST00000373010 TMEM183BQ1AE95 376 aa14.82□□□□□ -0.04
USP49-202ENST00000373010 C5orf64Q2M2E5 130 aa14.82□□□□□ -0.04
USP49-202ENST00000373010 MRPL54Q6P161 138 aaKnown RBP14.82□□□□□ -0.04
USP49-202ENST00000373010 ZNF600Q6ZNG1 722 aa14.82□□□□□ -0.04
USP49-202ENST00000373010 GNB1LQ9BYB4 327 aa14.82□□□□□ -0.04
USP49-202ENST00000373010 SLC25A39Q9BZJ4 359 aaPredicted RBP14.82□□□□□ -0.04
USP49-202ENST00000373010 CRISP2P16562 243 aa14.82□□□□□ -0.04
USP49-202ENST00000373010 UBE2G1P62253 170 aa14.82□□□□□ -0.04
USP49-202ENST00000373010 NAT8BQ9UHF3 227 aa14.82□□□□□ -0.04
USP49-202ENST00000373010 ASH1LQ9NR48 2969 aaKnown RBP14.82□□□□□ -0.04
USP49-202ENST00000373010 HOXB4P17483 251 aaPredicted RBP14.81□□□□□ -0.04
USP49-202ENST00000373010 TMEM136Q6ZRR5 245 aa14.81□□□□□ -0.04
USP49-202ENST00000373010 NUDT10Q8NFP7 164 aa14.81□□□□□ -0.04
USP49-202ENST00000373010 NUDT11Q96G61 164 aa14.81□□□□□ -0.04
USP49-202ENST00000373010 RBM14Q96PK6 669 aaKnown RBP14.81□□□□□ -0.04
USP49-202ENST00000373010 Q9H3A6 140 aa14.81□□□□□ -0.04
USP49-202ENST00000373010 F2Z2F3 143 aa14.81□□□□□ -0.04
USP49-202ENST00000373010 GATCO43716 136 aaKnown RBP14.81□□□□□ -0.04
USP49-202ENST00000373010 LINC00310P59036 64 aa14.81□□□□□ -0.04
USP49-202ENST00000373010 RAB4BP61018 213 aa14.81□□□□□ -0.04
USP49-202ENST00000373010 ITLN2Q8WWU7 325 aaPredicted RBP14.81□□□□□ -0.04
USP49-202ENST00000373010 NCBP2LA6PVI3 153 aaKnown RBP14.8□□□□□ -0.04
USP49-202ENST00000373010 KIAA1644Q3SXP7 199 aa14.8□□□□□ -0.04
USP49-202ENST00000373010 MBD6Q96DN6 1003 aa14.8□□□□□ -0.04
USP49-202ENST00000373010 AKAP6Q13023 2319 aa14.8□□□□□ -0.04
USP49-202ENST00000373010 TRBV9A0A0B4J1U6 114 aa14.8□□□□□ -0.04
USP49-202ENST00000373010 A6NNC1 897 aa14.8□□□□□ -0.04
USP49-202ENST00000373010 C19orf84I3L1E1 186 aa14.8□□□□□ -0.04
USP49-202ENST00000373010 C1orf122Q6ZSJ8 110 aa14.8□□□□□ -0.04
USP49-202ENST00000373010 FAM231DQ6ZW35 169 aa14.8□□□□□ -0.04
USP49-202ENST00000373010 CMTM2Q8TAZ6 248 aa14.8□□□□□ -0.04
USP49-202ENST00000373010 C7orf69Q9H7B7 122 aa14.8□□□□□ -0.04
USP49-202ENST00000373010 ZNF586Q9NXT0 402 aa14.8□□□□□ -0.04
USP49-202ENST00000373010 CSMD1Q96PZ7 3565 aa14.79□□□□□ -0.04
USP49-202ENST00000373010 NDPQ00604 133 aa14.79□□□□□ -0.04
USP49-202ENST00000373010 C5orf17Q8NAS9 161 aa14.79□□□□□ -0.04
USP49-202ENST00000373010 MRPL27Q9P0M9 148 aaKnown RBP14.79□□□□□ -0.04
USP49-202ENST00000373010 KLF12Q9Y4X4 402 aa14.79□□□□□ -0.04
USP49-202ENST00000373010 IZUMO1RA6ND01 250 aa14.78□□□□□ -0.04
USP49-202ENST00000373010 SERF1AO75920 110 aa14.78□□□□□ -0.04
USP49-202ENST00000373010 GNLYP22749 145 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms