RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 CCL19Q99731 98 aa10.61□□□□□ -0.71
CSTF2-201ENST00000372972 RASL11BQ9BPW5 248 aa10.61□□□□□ -0.71
CSTF2-201ENST00000372972 FAM103A1Q9BTL3 118 aaKnown RBP10.61□□□□□ -0.71
CSTF2-201ENST00000372972 TAS2R60P59551 318 aa10.6□□□□□ -0.71
CSTF2-201ENST00000372972 ERVFC1-1P60608 527 aa10.6□□□□□ -0.71
CSTF2-201ENST00000372972 CX3CL1P78423 397 aa10.6□□□□□ -0.71
CSTF2-201ENST00000372972 OR5I1Q13606 314 aa10.6□□□□□ -0.71
CSTF2-201ENST00000372972 ACTL10Q5JWF8 245 aa10.6□□□□□ -0.71
CSTF2-201ENST00000372972 TBX15Q96SF7 602 aa10.6□□□□□ -0.71
CSTF2-201ENST00000372972 IL36BQ9NZH7 164 aa10.6□□□□□ -0.71
CSTF2-201ENST00000372972 PITPNC1Q9UKF7 332 aa10.6□□□□□ -0.71
CSTF2-201ENST00000372972 IFITM10A6NMD0 228 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 FABP1P07148 127 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 TMEM11P17152 192 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 PDLIM4P50479 330 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 IGF2BP2-AS1Q96M15 143 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 GAR1Q9NY12 217 aaKnown RBP10.59□□□□□ -0.71
CSTF2-201ENST00000372972 CDC42EP3Q9UKI2 254 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 HIGD1AQ9Y241 93 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 TRAV9-1A0A075B6T8 112 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 NPIPB5A8MRT5 1133 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 SLC17A3O00476 420 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 GCGP01275 180 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 IGKV1-17P01599 117 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 NBEAP1P0C6P0 100 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 FAM106CPP0CH98 169 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 RD3LP0DJH9 198 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 S100A2P29034 98 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 MYCNOSP40205 109 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 CNN1P51911 297 aaKnown RBP10.59□□□□□ -0.71
CSTF2-201ENST00000372972 RANP62826 216 aaKnown RBP10.59□□□□□ -0.71
CSTF2-201ENST00000372972 GFI1BQ5VTD9 330 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 HIST3H2BBQ8N257 126 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 ARPC1AQ92747 370 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 RBM14Q96PK6 669 aaKnown RBP10.59□□□□□ -0.71
CSTF2-201ENST00000372972 COL12A1Q99715 3063 aa10.59□□□□□ -0.71
CSTF2-201ENST00000372972 UBR5O95071 2799 aaPredicted RBP10.59□□□□□ -0.71
CSTF2-201ENST00000372972 PCP4L1A6NKN8 68 aa10.58□□□□□ -0.72
CSTF2-201ENST00000372972 IGLV2-8P01709 118 aa10.58□□□□□ -0.72
CSTF2-201ENST00000372972 LYZP61626 148 aa10.58□□□□□ -0.72
CSTF2-201ENST00000372972 TTC9CQ8N5M4 171 aa10.58□□□□□ -0.72
CSTF2-201ENST00000372972 BLNKQ8WV28 456 aa10.58□□□□□ -0.72
CSTF2-201ENST00000372972 LPAR2Q9HBW0 351 aa10.58□□□□□ -0.72
CSTF2-201ENST00000372972 OSTCQ9NRP0 149 aa10.58□□□□□ -0.72
CSTF2-201ENST00000372972 V9GYV3 84 aa10.58□□□□□ -0.72
CSTF2-201ENST00000372972 A1L4Q6 167 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 PEX7O00628 323 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 ISLRO14498 428 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 SNRPCP09234 159 aaKnown RBP10.57□□□□□ -0.72
CSTF2-201ENST00000372972 GP9P14770 177 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 RPL15P61313 204 aaKnown RBP10.57□□□□□ -0.72
CSTF2-201ENST00000372972 RPEL1Q2QD12 228 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 KLF17Q5JT82 389 aaPredicted RBP10.57□□□□□ -0.72
CSTF2-201ENST00000372972 ASPHD1Q5U4P2 390 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 LINC00479Q96M42 142 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 GPR61Q9BZJ8 451 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 C1RLQ9NZP8 487 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 TRAPPC1Q9Y5R8 145 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 BRS3P32247 399 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 AJUBAQ96IF1 538 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 FANCD2OSQ96PS1 177 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 SLC25A39Q9BZJ4 359 aaPredicted RBP10.57□□□□□ -0.72
CSTF2-201ENST00000372972 MRPL27Q9P0M9 148 aaKnown RBP10.57□□□□□ -0.72
CSTF2-201ENST00000372972 EPDR1Q9UM22 224 aa10.57□□□□□ -0.72
CSTF2-201ENST00000372972 POLR3KQ9Y2Y1 108 aaPredicted RBP10.57□□□□□ -0.72
CSTF2-201ENST00000372972 UTP20O75691 2785 aaKnown RBP10.56□□□□□ -0.72
CSTF2-201ENST00000372972 IGLV11-55A0A075B6I3 123 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 TRAV30A0A087WSZ9 112 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 PGPA6NDG6 321 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 MGST1P10620 155 aaKnown RBP10.56□□□□□ -0.72
CSTF2-201ENST00000372972 COX6B1P14854 86 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 SAA4P35542 130 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 PDZD11Q5EBL8 140 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 LEMD1Q68G75 181 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 RNASE7Q9H1E1 156 aaKnown RBP10.56□□□□□ -0.72
CSTF2-201ENST00000372972 TMEM14CQ9P0S9 112 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 XKRY2A2RUG3 117 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 TOMM40O96008 361 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 SLC25A5P05141 298 aaKnown RBP10.56□□□□□ -0.72
CSTF2-201ENST00000372972 MFAP4P55083 255 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 NDPQ00604 133 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 COA6Q5JTJ3 125 aaKnown RBP10.56□□□□□ -0.72
CSTF2-201ENST00000372972 FAM120AOSQ5T036 256 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 ZNF600Q6ZNG1 722 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 BAGE2Q86Y30 109 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 TMEM183AQ8IXX5 376 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 Q8N9W7 124 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 THYN1Q9P016 225 aa10.56□□□□□ -0.72
CSTF2-201ENST00000372972 HIST1H1BP16401 226 aaKnown RBP10.55□□□□□ -0.72
CSTF2-201ENST00000372972 ATP5J2P56134 94 aa10.55□□□□□ -0.72
CSTF2-201ENST00000372972 YPEL3P61236 119 aaPredicted RBP10.55□□□□□ -0.72
CSTF2-201ENST00000372972 IBA57Q5T440 356 aaKnown RBP10.55□□□□□ -0.72
CSTF2-201ENST00000372972 TMEM68Q96MH6 324 aa10.55□□□□□ -0.72
CSTF2-201ENST00000372972 ZNF48Q96MX3 618 aaPredicted RBP10.55□□□□□ -0.72
CSTF2-201ENST00000372972 IGHV7-81A0A0B4J1V7 117 aa10.54□□□□□ -0.72
CSTF2-201ENST00000372972 TRAV34A0A0B4J273 112 aa10.54□□□□□ -0.72
CSTF2-201ENST00000372972 NPFFO15130 113 aa10.54□□□□□ -0.72
CSTF2-201ENST00000372972 GNG7O60262 68 aa10.54□□□□□ -0.72
CSTF2-201ENST00000372972 EGR2P11161 476 aaPredicted RBP10.54□□□□□ -0.72
CSTF2-201ENST00000372972 TMEM183BQ1AE95 376 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 233.7 ms