RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 ZFP92A6NM28 416 aa16.71■□□□□ 0.27
COL9A2-201ENST00000372736 K7EQG2 157 aa16.71■□□□□ 0.27
COL9A2-201ENST00000372736 ID3Q02535 119 aa16.71■□□□□ 0.27
COL9A2-201ENST00000372736 ZNF90Q03938 601 aa16.71■□□□□ 0.27
COL9A2-201ENST00000372736 LINC00299Q6ZSB3 139 aa16.71■□□□□ 0.27
COL9A2-201ENST00000372736 STPG3Q8N7X2 389 aa16.71■□□□□ 0.27
COL9A2-201ENST00000372736 OR51G1Q8NGK1 321 aa16.71■□□□□ 0.27
COL9A2-201ENST00000372736 OR4D5Q8NGN0 318 aa16.71■□□□□ 0.27
COL9A2-201ENST00000372736 DCANP1Q8TF63 244 aa16.71■□□□□ 0.27
COL9A2-201ENST00000372736 RNF125Q96EQ8 232 aa16.71■□□□□ 0.27
COL9A2-201ENST00000372736 TENM2Q9NT68 2774 aa16.71■□□□□ 0.26
COL9A2-201ENST00000372736 DEFB131AP59861 70 aa16.7■□□□□ 0.26
COL9A2-201ENST00000372736 RPP30P78346 268 aaKnown RBP16.7■□□□□ 0.26
COL9A2-201ENST00000372736 RYR3Q15413 4870 aa16.7■□□□□ 0.26
COL9A2-201ENST00000372736 IGKV1OR2-108A0A075B7D4 117 aa16.69■□□□□ 0.26
COL9A2-201ENST00000372736 HELTA6NFD8 242 aa16.69■□□□□ 0.26
COL9A2-201ENST00000372736 H3BP45 60 aa16.69■□□□□ 0.26
COL9A2-201ENST00000372736 SPRY2O43597 315 aa16.69■□□□□ 0.26
COL9A2-201ENST00000372736 IFNA21P01568 189 aa16.69■□□□□ 0.26
COL9A2-201ENST00000372736 POLR2GP62487 172 aaKnown RBP eCLIP16.69■□□□□ 0.26
COL9A2-201ENST00000372736 LEMD1Q68G75 181 aa16.69■□□□□ 0.26
COL9A2-201ENST00000372736 MITD1Q8WV92 249 aa16.69■□□□□ 0.26
COL9A2-201ENST00000372736 BUB3O43684 328 aa16.68■□□□□ 0.26
COL9A2-201ENST00000372736 TCRBP04435 133 aa16.68■□□□□ 0.26
COL9A2-201ENST00000372736 NKX2-1P43699 371 aaPredicted RBP16.68■□□□□ 0.26
COL9A2-201ENST00000372736 SPANXN5Q5MJ07 72 aa16.68■□□□□ 0.26
COL9A2-201ENST00000372736 THAP8Q8NA92 274 aa16.68■□□□□ 0.26
COL9A2-201ENST00000372736 RNF183Q96D59 192 aa16.68■□□□□ 0.26
COL9A2-201ENST00000372736 TRGV9Q99603 122 aa16.68■□□□□ 0.26
COL9A2-201ENST00000372736 DYNC2H1Q8NCM8 4307 aaKnown RBP16.68■□□□□ 0.26
COL9A2-201ENST00000372736 A6NHS1 94 aa16.67■□□□□ 0.26
COL9A2-201ENST00000372736 EIF2B2P49770 351 aaKnown RBP16.67■□□□□ 0.26
COL9A2-201ENST00000372736 PBDC1Q9BVG4 233 aa16.67■□□□□ 0.26
COL9A2-201ENST00000372736 STRAPQ9Y3F4 350 aaKnown RBP16.67■□□□□ 0.26
COL9A2-201ENST00000372736 TRAV6A0A075B6T7 132 aa16.66■□□□□ 0.26
COL9A2-201ENST00000372736 SSSCA1O60232 199 aa16.66■□□□□ 0.26
COL9A2-201ENST00000372736 FABP1P07148 127 aa16.66■□□□□ 0.26
COL9A2-201ENST00000372736 OR8G2PQ6IF36 304 aa16.66■□□□□ 0.26
COL9A2-201ENST00000372736 CSTL1Q9H114 145 aa16.66■□□□□ 0.26
COL9A2-201ENST00000372736 NUDT15Q9NV35 164 aa16.66■□□□□ 0.26
COL9A2-201ENST00000372736 AGRNO00468 2067 aa16.65■□□□□ 0.26
COL9A2-201ENST00000372736 ZNF688P0C7X2 276 aa16.65■□□□□ 0.26
COL9A2-201ENST00000372736 LYZP61626 148 aa16.65■□□□□ 0.26
COL9A2-201ENST00000372736 OR2F1Q13607 317 aa16.65■□□□□ 0.26
COL9A2-201ENST00000372736 IAH1Q2TAA2 248 aaPredicted RBP16.65■□□□□ 0.26
COL9A2-201ENST00000372736 ACOT7LQ6ZUV0 252 aa16.65■□□□□ 0.26
COL9A2-201ENST00000372736 S100ZQ8WXG8 99 aa16.65■□□□□ 0.26
COL9A2-201ENST00000372736 TBC1D24Q9ULP9 559 aa16.65■□□□□ 0.26
COL9A2-201ENST00000372736 NUP62P37198 522 aaPredicted RBP16.64■□□□□ 0.25
COL9A2-201ENST00000372736 AP2S1P53680 142 aaPredicted RBP16.64■□□□□ 0.25
COL9A2-201ENST00000372736 SIGLEC15Q6ZMC9 328 aa16.64■□□□□ 0.25
COL9A2-201ENST00000372736 ZBTB8BQ8NAP8 495 aaPredicted RBP16.64■□□□□ 0.25
COL9A2-201ENST00000372736 IL17DQ8TAD2 202 aa16.64■□□□□ 0.25
COL9A2-201ENST00000372736 PSENENQ9NZ42 101 aa16.64■□□□□ 0.25
COL9A2-201ENST00000372736 A0A0J9YWU9 116 aa16.63■□□□□ 0.25
COL9A2-201ENST00000372736 PAX9P55771 341 aa16.63■□□□□ 0.25
COL9A2-201ENST00000372736 SMIM8Q96KF7 97 aa16.63■□□□□ 0.25
COL9A2-201ENST00000372736 SEC22CQ9BRL7 303 aa16.63■□□□□ 0.25
COL9A2-201ENST00000372736 NRN1Q9NPD7 142 aa16.63■□□□□ 0.25
COL9A2-201ENST00000372736 RCL1Q9Y2P8 373 aaKnown RBP16.63■□□□□ 0.25
COL9A2-201ENST00000372736 PMS2P5A8MQ11 134 aa16.62■□□□□ 0.25
COL9A2-201ENST00000372736 SNRPGP15A8MWD9 76 aa16.62■□□□□ 0.25
COL9A2-201ENST00000372736 CCSO14618 274 aa16.62■□□□□ 0.25
COL9A2-201ENST00000372736 SCGB1D2O95969 90 aa16.62■□□□□ 0.25
COL9A2-201ENST00000372736 TRPT1Q86TN4 253 aaKnown RBP16.62■□□□□ 0.25
COL9A2-201ENST00000372736 KNCNA6PVL3 124 aa16.61■□□□□ 0.25
COL9A2-201ENST00000372736 CCNKO75909 580 aa16.61■□□□□ 0.25
COL9A2-201ENST00000372736 CA1P00915 261 aaPredicted RBP16.61■□□□□ 0.25
COL9A2-201ENST00000372736 EWSR1Q01844 656 aaKnown RBP eCLIP16.61■□□□□ 0.25
COL9A2-201ENST00000372736 AKR1C1Q04828 323 aa16.61■□□□□ 0.25
COL9A2-201ENST00000372736 ASAH1Q13510 395 aa16.61■□□□□ 0.25
COL9A2-201ENST00000372736 STHQ8IWL8 128 aa16.61■□□□□ 0.25
COL9A2-201ENST00000372736 ZNF431Q8TF32 576 aaPredicted RBP16.61■□□□□ 0.25
COL9A2-201ENST00000372736 GATAD1Q8WUU5 269 aa16.61■□□□□ 0.25
COL9A2-201ENST00000372736 PTTG2Q9NZH5 202 aa16.61■□□□□ 0.25
COL9A2-201ENST00000372736 GSKIPQ9P0R6 139 aa16.61■□□□□ 0.25
COL9A2-201ENST00000372736 PSMG4Q5JS54 123 aa16.6■□□□□ 0.25
COL9A2-201ENST00000372736 TMEM14EPQ6UXP3 125 aa16.6■□□□□ 0.25
COL9A2-201ENST00000372736 RAB40CQ96S21 281 aa16.6■□□□□ 0.25
COL9A2-201ENST00000372736 PFDN2Q9UHV9 154 aa16.6■□□□□ 0.25
COL9A2-201ENST00000372736 FAM240BA0A1B0GVZ2 78 aa16.59■□□□□ 0.25
COL9A2-201ENST00000372736 MBPP02686 304 aaPredicted RBP16.59■□□□□ 0.25
COL9A2-201ENST00000372736 H2AFB2P0C5Z0 115 aa16.59■□□□□ 0.25
COL9A2-201ENST00000372736 C1orf194Q5T5A4 169 aa16.59■□□□□ 0.25
COL9A2-201ENST00000372736 TMEM182Q6ZP80 229 aaPredicted RBP16.59■□□□□ 0.25
COL9A2-201ENST00000372736 TMEM144Q7Z5S9 345 aa16.59■□□□□ 0.25
COL9A2-201ENST00000372736 SEPSECSQ9HD40 501 aaKnown RBP16.59■□□□□ 0.25
COL9A2-201ENST00000372736 LYSTQ99698 3801 aa16.59■□□□□ 0.25
COL9A2-201ENST00000372736 TSC22D2O75157 780 aa16.58■□□□□ 0.24
COL9A2-201ENST00000372736 CFDP00746 253 aaPredicted RBP16.58■□□□□ 0.24
COL9A2-201ENST00000372736 GIG44P09565 113 aaPredicted RBP16.58■□□□□ 0.24
COL9A2-201ENST00000372736 METTL15P1P0C7V9 234 aa16.58■□□□□ 0.24
COL9A2-201ENST00000372736 GATA2P23769 480 aaPredicted RBP16.58■□□□□ 0.24
COL9A2-201ENST00000372736 TAS2R30P59541 319 aa16.58■□□□□ 0.24
COL9A2-201ENST00000372736 ACTL10Q5JWF8 245 aa16.58■□□□□ 0.24
COL9A2-201ENST00000372736 MZT2BQ6NZ67 158 aa16.58■□□□□ 0.24
COL9A2-201ENST00000372736 WDR12Q9GZL7 423 aaKnown RBP16.58■□□□□ 0.24
COL9A2-201ENST00000372736 SACSQ9NZJ4 4579 aa16.57■□□□□ 0.24
COL9A2-201ENST00000372736 LCE6AA0A183 80 aa16.57■□□□□ 0.24
COL9A2-201ENST00000372736 SMCO3A2RU48 225 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms