RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 GAGE12GP0CL81 117 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 GAGE12IP0CL82 117 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 ZNF703Q9H7S9 590 aaPredicted RBP12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 EXPH5Q8NEV8 1989 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 CD55P08174 381 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 SRFP11831 508 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 CACNG8Q8WXS5 425 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 MALRD1Q5VYJ5 2156 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 ZIC1Q15915 447 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 CLEC19AQ6UXS0 136 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 DSCR8Q96T75 97 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 SNHG12Q9BXW3 62 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 CNOT1A5YKK6 2376 aaKnown RBP12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 IGHV3-73A0A0B4J1V6 119 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 CDKN1AP38936 164 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 C1QTNF4Q9BXJ3 329 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 RPRMLQ8N4K4 120 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 IGHV1OR21-1A0A087WYE8 117 aa12.85□□□□□ -0.35
GTF3C4-201ENST00000372146 RAMP3O60896 148 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 IGKV1D-16P01601 117 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 AMELYQ99218 206 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 CHCHD5Q9BSY4 110 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 ADAMTSL1Q8N6G6 1762 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 RHOGP84095 191 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 LCTP09848 1927 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 DTX4Q9Y2E6 619 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 HAPLN4Q86UW8 402 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 TMEM167AQ8TBQ9 72 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 FBXL7Q9UJT9 491 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 LOC101059948A0A1B0GTJ6 334 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 OR9G1Q8NH87 305 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 TIMM21Q9BVV7 248 aa12.84□□□□□ -0.35
GTF3C4-201ENST00000372146 TMEM171Q8WVE6 324 aa12.83□□□□□ -0.35
GTF3C4-201ENST00000372146 TRGV4A0A0C4DH28 118 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 PRB2P02812 416 aaPredicted RBP12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 SLC50A1Q9BRV3 221 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 TRBV5-3A0A0A0MS03 114 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 HAMPP81172 84 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 MESP2Q0VG99 397 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 ZP4Q12836 540 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 ZNF525Q8N782 197 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 ARPC1AQ92747 370 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 WBP1LQ9NX94 342 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 SMAD7O15105 426 aaKnown RBP12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 TMEM196Q5HYL7 178 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 STHQ8IWL8 128 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 YBX2Q9Y2T7 364 aaKnown RBP12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 IGKV1D-33P01593 117 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 IGKV1-33P01594 117 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 IGFBP6P24592 240 aaPredicted RBP12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 MORN5Q5VZ52 161 aa12.83□□□□□ -0.36
GTF3C4-201ENST00000372146 IGHG3P01860 377 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 C3orf79P0CE67 100 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 PYYP10082 97 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 GZMMP51124 257 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 ZNF721Q8TF20 911 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 BRK1Q8WUW1 75 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 C18orf12Q96KH6 178 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 PRSS57Q6UWY2 283 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 SLC25A48Q6ZT89 311 aaKnown RBP12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 MCRIP2Q9BUT9 160 aaKnown RBP12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 RNF126Q9BV68 326 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 C21orf62Q9NYP8 219 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 CREBBPQ92793 2442 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 ZNF474Q6S9Z5 364 aaPredicted RBP12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 DTX2Q86UW9 622 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 TTTY12Q9BZ98 90 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 IGHV3OR16-10A0A075B7F0 116 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 GREM1O60565 184 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 ANKRD29Q8N6D5 301 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 GPBAR1Q8TDU6 330 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 SSC4DQ8WTU2 575 aa12.82□□□□□ -0.36
GTF3C4-201ENST00000372146 LRP5O75197 1615 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 C17orf98A8MV24 154 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 C1QCP02747 245 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 NUP35Q8NFH5 326 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 TRBV24-1A0A075B6N3 115 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 ZNRF1Q8ND25 227 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 A0A1W2PPI3 338 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 KCNK17Q96T54 332 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 WFDC6Q9BQY6 131 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 SPXQ9BT56 116 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 J3KT08 172 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 IGHG4P01861 327 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 COX5BP10606 129 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 BAALCQ8WXS3 180 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 EFNB3Q15768 340 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 KLF14Q8TD94 323 aaPredicted RBP12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 CCL21O00585 134 aa12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 POLR3KQ9Y2Y1 108 aaPredicted RBP12.81□□□□□ -0.36
GTF3C4-201ENST00000372146 ERCC8Q13216 396 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 STPG4Q8N801 248 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 SLC25A28Q96A46 364 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 ZNF319Q9P2F9 582 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 K7EP34 96 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 PHF7Q9BWX1 381 aaPredicted RBP12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 F8VVB4 439 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 F8VWA3 439 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 NDUFA2O43678 99 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 LINC01549A6NIU2 74 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms