RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 TOMM40O96008 361 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 IL4P05112 153 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 PSG1P11464 419 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 TFPI2P48307 235 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 DEFA1P59665 94 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 DEFA3P59666 94 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 RPP30P78346 268 aaKnown RBP11.28□□□□□ -0.6
SS18L1-202ENST00000370848 FAM90A2PQ658T7 463 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 LAMTOR1Q6IAA8 161 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 ACOT7LQ6ZUV0 252 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 TCF24Q7RTU0 167 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 GBGT1Q8N5D6 347 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 IL17DQ8TAD2 202 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 Q8WTZ3 238 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 SMIM8Q96KF7 97 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 SPAG8Q99932 426 aaPredicted RBP11.28□□□□□ -0.6
SS18L1-202ENST00000370848 TUBA4BQ9H853 241 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 SRD5A3Q9H8P0 318 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 LSM5Q9Y4Y9 91 aaKnown RBP11.28□□□□□ -0.6
SS18L1-202ENST00000370848 ZFP92A6NM28 416 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 K7EPK0 472 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 DFFBO76075 338 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 SIX6O95475 246 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 METTL15P1P0C7V9 234 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 RD3LP0DJH9 198 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 NPPCP23582 126 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 CRYBB3P26998 211 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 OR2F1Q13607 317 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 ODF3L2Q3SX64 289 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 OR8G2PQ6IF36 304 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 TMEM14EPQ6UXP3 125 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 OR51G1Q8NGK1 321 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 C2orf50Q96LR7 162 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 METTL26Q96S19 204 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 MARVELD1Q9BSK0 173 aa11.27□□□□□ -0.61
SS18L1-202ENST00000370848 C7orf66A4D0T2 115 aa11.26□□□□□ -0.61
SS18L1-202ENST00000370848 RBMY1BA6NDE4 496 aaKnown RBP11.26□□□□□ -0.61
SS18L1-202ENST00000370848 RBMY1EA6NEQ0 496 aaKnown RBP11.26□□□□□ -0.61
SS18L1-202ENST00000370848 RBMY1DP0C7P1 496 aaKnown RBP11.26□□□□□ -0.61
SS18L1-202ENST00000370848 ARL16Q0P5N6 197 aa11.26□□□□□ -0.61
SS18L1-202ENST00000370848 GSG1LQ6UXU4 331 aa11.26□□□□□ -0.61
SS18L1-202ENST00000370848 THAP8Q8NA92 274 aa11.26□□□□□ -0.61
SS18L1-202ENST00000370848 RAB40CQ96S21 281 aa11.26□□□□□ -0.61
SS18L1-202ENST00000370848 C11orf1Q9H5F2 150 aa11.26□□□□□ -0.61
SS18L1-202ENST00000370848 GOSR2O14653 212 aa11.25□□□□□ -0.61
SS18L1-202ENST00000370848 HNRNPCP07910 306 aaKnown RBP eCLIP11.25□□□□□ -0.619e-10■□□□□ 10.2
SS18L1-202ENST00000370848 P2RY1P47900 373 aa11.25□□□□□ -0.61
SS18L1-202ENST00000370848 S100A10P60903 97 aa11.25□□□□□ -0.61
SS18L1-202ENST00000370848 RRAS2P62070 204 aaPredicted RBP11.25□□□□□ -0.61
SS18L1-202ENST00000370848 IL15RAQ13261 267 aa11.25□□□□□ -0.61
SS18L1-202ENST00000370848 TMEM182Q6ZP80 229 aaPredicted RBP11.25□□□□□ -0.61
SS18L1-202ENST00000370848 WFDC3Q8IUB2 231 aa11.25□□□□□ -0.61
SS18L1-202ENST00000370848 PBDC1Q9BVG4 233 aa11.25□□□□□ -0.61
SS18L1-202ENST00000370848 GPN1Q9HCN4 374 aaPredicted RBP11.25□□□□□ -0.61
SS18L1-202ENST00000370848 U3KQE9 123 aa11.25□□□□□ -0.61
SS18L1-202ENST00000370848 SMCO3A2RU48 225 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 OR4C46A6NHA9 309 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 SNRPGP15A8MWD9 76 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 PRAF2O60831 178 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 TSC22D2O75157 780 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 GATA2P23769 480 aaPredicted RBP11.24□□□□□ -0.61
SS18L1-202ENST00000370848 LYZP61626 148 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 AKR1C1Q04828 323 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 RAB32Q13637 225 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 ZNF124Q15973 351 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 FAM24BQ8N5W8 94 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 STPG3Q8N7X2 389 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 RNF125Q96EQ8 232 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 TRGV9Q99603 122 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 MS4A6AQ9H2W1 248 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 RETNQ9HD89 108 aa11.24□□□□□ -0.61
SS18L1-202ENST00000370848 FAM24AA6NFZ4 105 aa11.23□□□□□ -0.61
SS18L1-202ENST00000370848 L7N2F9 121 aa11.23□□□□□ -0.61
SS18L1-202ENST00000370848 BMI1P35226 326 aa11.23□□□□□ -0.61
SS18L1-202ENST00000370848 TAS2R30P59541 319 aa11.23□□□□□ -0.61
SS18L1-202ENST00000370848 RPL11P62913 178 aaKnown RBP11.23□□□□□ -0.61
SS18L1-202ENST00000370848 VAMP2P63027 116 aa11.23□□□□□ -0.61
SS18L1-202ENST00000370848 GLMPQ8WWB7 406 aa11.23□□□□□ -0.61
SS18L1-202ENST00000370848 A0A1W2PS18 150 aa11.22□□□□□ -0.61
SS18L1-202ENST00000370848 BCAP31P51572 246 aa11.22□□□□□ -0.61
SS18L1-202ENST00000370848 DLK1P80370 383 aa11.22□□□□□ -0.61
SS18L1-202ENST00000370848 C16orf54Q6UWD8 224 aa11.22□□□□□ -0.61
SS18L1-202ENST00000370848 APRG1Q8IVJ8 170 aa11.22□□□□□ -0.61
SS18L1-202ENST00000370848 TMEM231Q9H6L2 316 aa11.22□□□□□ -0.61
SS18L1-202ENST00000370848 RABAC1Q9UI14 185 aa11.22□□□□□ -0.61
SS18L1-202ENST00000370848 JTBO76095 146 aa11.21□□□□□ -0.61
SS18L1-202ENST00000370848 EIF2B2P49770 351 aaKnown RBP11.21□□□□□ -0.61
SS18L1-202ENST00000370848 CAV2P51636 162 aa11.21□□□□□ -0.61
SS18L1-202ENST00000370848 TMEM144Q7Z5S9 345 aa11.21□□□□□ -0.61
SS18L1-202ENST00000370848 STXBP6Q8NFX7 210 aa11.21□□□□□ -0.61
SS18L1-202ENST00000370848 OR10P1Q8NGE3 313 aa11.21□□□□□ -0.61
SS18L1-202ENST00000370848 NARS2Q96I59 477 aaKnown RBP11.21□□□□□ -0.61
SS18L1-202ENST00000370848 MAP6D1Q9H9H5 199 aa11.21□□□□□ -0.61
SS18L1-202ENST00000370848 IGSF23A1L1A6 192 aa11.2□□□□□ -0.62
SS18L1-202ENST00000370848 DNASE2O00115 360 aaPredicted RBP11.2□□□□□ -0.62
SS18L1-202ENST00000370848 BUB3O43684 328 aa11.2□□□□□ -0.62
SS18L1-202ENST00000370848 CST7O76096 145 aa11.2□□□□□ -0.62
SS18L1-202ENST00000370848 H2BFSP57053 126 aa11.2□□□□□ -0.62
SS18L1-202ENST00000370848 GRAMD2BQ96HH9 432 aa11.2□□□□□ -0.62
SS18L1-202ENST00000370848 FAM110AQ9BQ89 295 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms