RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 RNASE1P07998 156 aaKnown RBP14.13□□□□□ -0.15
PTP4A1-201ENST00000370651 NUP35Q8NFH5 326 aa14.13□□□□□ -0.15
PTP4A1-201ENST00000370651 IGHV1-18A0A0C4DH31 117 aa14.13□□□□□ -0.15
PTP4A1-201ENST00000370651 TRAV8-2A0A0B4J237 113 aa14.13□□□□□ -0.15
PTP4A1-201ENST00000370651 IGHV2-5P01817 119 aa14.13□□□□□ -0.15
PTP4A1-201ENST00000370651 SPTBN2O15020 2390 aa14.13□□□□□ -0.15
PTP4A1-201ENST00000370651 LINC00473A8K010 186 aa14.13□□□□□ -0.15
PTP4A1-201ENST00000370651 NAA38Q9BRA0 125 aaKnown RBP14.13□□□□□ -0.15
PTP4A1-201ENST00000370651 PTPRDP23468 1912 aa14.13□□□□□ -0.15
PTP4A1-201ENST00000370651 GFRA3O60609 400 aa14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 PPIFP30405 207 aaKnown RBP14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 PRR31Q5SQ13 230 aa14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 POLR3KQ9Y2Y1 108 aaPredicted RBP14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 IGHV3OR16-10A0A075B7F0 116 aa14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 HOXA3O43365 443 aaPredicted RBP14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 Q6P435 159 aa14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 DUX5Q96PT3 197 aa14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 ANAPC10Q9UM13 185 aa14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 FANCMQ8IYD8 2048 aa14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 ZFP36L1Q07352 338 aaKnown RBP14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 EVI2AP22794 236 aa14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 DMRTC2Q8IXT2 367 aaPredicted RBP14.12□□□□□ -0.15
PTP4A1-201ENST00000370651 A0A0G2JLM5 398 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 SELLP14151 372 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 PRB3Q04118 309 aaPredicted RBP14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 C20orf144Q9BQM9 153 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 TCRAP04437 139 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 TMPRSS3P57727 454 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 SPRR3Q9UBC9 169 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 EP300Q09472 2414 aaPredicted RBP14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 GUSBP1Q15486 140 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 ORMDL2Q53FV1 153 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 FOXL2NBQ6ZUU3 175 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 LHFPL4Q7Z7J7 247 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 JMJD8Q96S16 334 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 SLC25A2Q9BXI2 301 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 A0A087X0K7 114 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 PRR19A6NJB7 356 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 C9orf172C9J069 976 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 SYS1-DBNDD2H3BUS1 97 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 RNASE4P34096 147 aaKnown RBP14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 ZCCHC24Q8N2G6 241 aaKnown RBP14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 SMPXQ9UHP9 88 aa14.11□□□□□ -0.15
PTP4A1-201ENST00000370651 IGKV3OR2-268A0A0C4DH90 116 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 PAX1P15863 534 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 OR13C6PQ8NH95 151 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 FAM57AQ8TBR7 257 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 C1orf147Q96MC9 270 aaPredicted RBP14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 PIMREGQ9BSJ6 248 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 F2Z2F3 143 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 SPOCK3Q9BQ16 436 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 SNHG12Q9BXW3 62 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 COLQQ9Y215 455 aaPredicted RBP14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 ABCA1O95477 2261 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 D6R8Y8 96 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 LILRA1O75019 489 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 GAGE13Q4V321 117 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 C20orf204Q6ZNR8 217 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 WNK2Q9Y3S1 2297 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 E9PLN8 166 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 METRNQ9UJH8 293 aa14.1□□□□□ -0.15
PTP4A1-201ENST00000370651 PMS2P5A8MQ11 134 aa14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 NPIPB5A8MRT5 1133 aa14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 EXOC3-AS1Q8N2X6 119 aa14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 CD177Q8N6Q3 437 aa14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 CYSLTR1Q9Y271 337 aa14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 POLEQ07864 2286 aa14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 ZNF815PA8K554 130 aa14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 Q0VG73 95 aa14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 LINC01559Q495D7 138 aa14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 CHTOPQ9Y3Y2 248 aaKnown RBP14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 IGHV1-46P01743 117 aa14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 BCL6BQ8N143 479 aaPredicted RBP14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 TMEM190Q8WZ59 177 aa14.09□□□□□ -0.15
PTP4A1-201ENST00000370651 IL18BPO95998 194 aa14.08□□□□□ -0.15
PTP4A1-201ENST00000370651 PSG1P11464 419 aa14.08□□□□□ -0.15
PTP4A1-201ENST00000370651 SELENOKQ9Y6D0 94 aa14.08□□□□□ -0.15
PTP4A1-201ENST00000370651 H3BRM9 83 aa14.08□□□□□ -0.16
PTP4A1-201ENST00000370651 RPRMLQ8N4K4 120 aa14.08□□□□□ -0.16
PTP4A1-201ENST00000370651 A0A1B0GUS0 222 aa14.08□□□□□ -0.16
PTP4A1-201ENST00000370651 NCR2O95944 276 aa14.08□□□□□ -0.16
PTP4A1-201ENST00000370651 LINC00205P59089 165 aa14.08□□□□□ -0.16
PTP4A1-201ENST00000370651 TEX29Q8N6K0 151 aa14.08□□□□□ -0.16
PTP4A1-201ENST00000370651 SCRT1Q9BWW7 348 aa14.08□□□□□ -0.16
PTP4A1-201ENST00000370651 IGKV1-6A0A0C4DH72 117 aa14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 CD24P25063 80 aa14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 INTS1Q8N201 2190 aaKnown RBP14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 PDLIM4P50479 330 aa14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 NEU4Q8WWR8 484 aaPredicted RBP14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 TMEM262E9PQX1 116 aa14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 PRB4P10163 310 aaPredicted RBP14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 GTSCR1Q86UQ5 136 aa14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 SLC25A39Q9BZJ4 359 aaPredicted RBP14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 MYOD1P15172 320 aa14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 TPTE2P1Q5T6R2 138 aa14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 TNFRSF14Q92956 283 aa14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 TRGV9Q99603 122 aa14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 DOCK11Q5JSL3 2073 aa14.07□□□□□ -0.16
PTP4A1-201ENST00000370651 TRAV21A0A0B4J279 112 aa14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 TMEM167AQ8TBQ9 72 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms