RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 C11orf1Q9H5F2 150 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 IGHV3-66A0A0C4DH42 116 aa11.18□□□□□ -0.62
COL9A1-204ENST00000370496 FAM24AA6NFZ4 105 aa11.18□□□□□ -0.62
COL9A1-204ENST00000370496 CHEK1O14757 476 aa11.18□□□□□ -0.62
COL9A1-204ENST00000370496 CST7O76096 145 aa11.18□□□□□ -0.62
COL9A1-204ENST00000370496 SLC38A11Q08AI6 406 aa11.18□□□□□ -0.62
COL9A1-204ENST00000370496 OR2F1Q13607 317 aa11.18□□□□□ -0.62
COL9A1-204ENST00000370496 LILRB2Q8N423 598 aa11.18□□□□□ -0.62
COL9A1-204ENST00000370496 TMEM217Q8N7C4 229 aa11.18□□□□□ -0.62
COL9A1-204ENST00000370496 ST8SIA2Q92186 375 aa11.18□□□□□ -0.62
COL9A1-204ENST00000370496 RNF125Q96EQ8 232 aa11.18□□□□□ -0.62
COL9A1-204ENST00000370496 PBDC1Q9BVG4 233 aa11.18□□□□□ -0.62
COL9A1-204ENST00000370496 IGKV1OR2-108A0A075B7D4 117 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 TRAV25A0A0B4J276 109 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 A0A1W2PS18 150 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 IGSF23A1L1A6 192 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 E5RGE8 158 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 FNDC10F2Z333 226 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 SULT1A1P50225 295 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 CD81P60033 236 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 LYZP61626 148 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 HBG1P69891 147 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 HBG2P69892 147 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 USF2Q15853 346 aaPredicted RBP11.17□□□□□ -0.62
COL9A1-204ENST00000370496 TMEM144Q7Z5S9 345 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 GRAMD2BQ96HH9 432 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 RNF2Q99496 336 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 GGACTQ9BVM4 153 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 OR5AC2Q9NZP5 309 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 RABAC1Q9UI14 185 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 BOLA1Q9Y3E2 137 aa11.17□□□□□ -0.62
COL9A1-204ENST00000370496 HNRNPCP07910 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
COL9A1-204ENST00000370496 CXCL3P19876 107 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 CRYBB3P26998 211 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 ARL16Q0P5N6 197 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 FCN2Q15485 313 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 TMEM252Q8N6L7 170 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 SPAG8Q99932 426 aaPredicted RBP11.16□□□□□ -0.62
COL9A1-204ENST00000370496 SMAD5-AS1Q9Y6J3 95 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 IGKV3-7A0A075B6H7 116 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 TSPAN4O14817 238 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 APOHP02749 345 aaPredicted RBP11.16□□□□□ -0.62
COL9A1-204ENST00000370496 NUP62P37198 522 aaPredicted RBP11.16□□□□□ -0.62
COL9A1-204ENST00000370496 P2RY1P47900 373 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 TEPPQ6URK8 271 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 TCF24Q7RTU0 167 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 BPIFCQ8NFQ6 507 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 OR11H7Q8NGC8 314 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 SLC25A31Q9H0C2 315 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 VSIRQ9H7M9 311 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 NPVFQ9HCQ7 196 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 PFDN2Q9UHV9 154 aa11.16□□□□□ -0.62
COL9A1-204ENST00000370496 UBE2L5PA0A1B0GUS4 154 aa11.15□□□□□ -0.63
COL9A1-204ENST00000370496 OR4C46A6NHA9 309 aa11.15□□□□□ -0.63
COL9A1-204ENST00000370496 ZNF785A8K8V0 405 aa11.15□□□□□ -0.63
COL9A1-204ENST00000370496 H0YIZ8 118 aa11.15□□□□□ -0.63
COL9A1-204ENST00000370496 MPC2O95563 127 aa11.15□□□□□ -0.63
COL9A1-204ENST00000370496 CFDP00746 253 aaPredicted RBP11.15□□□□□ -0.63
COL9A1-204ENST00000370496 CD5P06127 495 aa11.15□□□□□ -0.63
COL9A1-204ENST00000370496 EIF2B2P49770 351 aaKnown RBP11.15□□□□□ -0.63
COL9A1-204ENST00000370496 RPL11P62913 178 aaKnown RBP11.15□□□□□ -0.63
COL9A1-204ENST00000370496 EWSR1Q01844 656 aaKnown RBP eCLIP11.15□□□□□ -0.63
COL9A1-204ENST00000370496 CYP2G1PQ6ZSU1 146 aa11.15□□□□□ -0.63
COL9A1-204ENST00000370496 PPP1R14BQ96C90 147 aa11.15□□□□□ -0.63
COL9A1-204ENST00000370496 NEURL2Q9BR09 285 aa11.15□□□□□ -0.63
COL9A1-204ENST00000370496 TMEM147Q9BVK8 224 aa11.15□□□□□ -0.63
COL9A1-204ENST00000370496 UQCC1Q9NVA1 299 aa11.15□□□□□ -0.63
COL9A1-204ENST00000370496 MBD2Q9UBB5 411 aa11.15□□□□□ -0.63
COL9A1-204ENST00000370496 LSM4Q9Y4Z0 139 aaKnown RBP11.15□□□□□ -0.63
COL9A1-204ENST00000370496 PRKDCP78527 4128 aaKnown RBP11.14□□□□□ -0.63
COL9A1-204ENST00000370496 S100A11P31949 105 aa11.14□□□□□ -0.63
COL9A1-204ENST00000370496 ZNF546Q86UE3 836 aa11.14□□□□□ -0.63
COL9A1-204ENST00000370496 DFFBO76075 338 aa11.13□□□□□ -0.63
COL9A1-204ENST00000370496 CD7P09564 240 aa11.13□□□□□ -0.63
COL9A1-204ENST00000370496 LINC00869P0C866 280 aa11.13□□□□□ -0.63
COL9A1-204ENST00000370496 GATA2P23769 480 aaPredicted RBP11.13□□□□□ -0.63
COL9A1-204ENST00000370496 TFPI2P48307 235 aa11.13□□□□□ -0.63
COL9A1-204ENST00000370496 SELENOTP62341 195 aa11.13□□□□□ -0.63
COL9A1-204ENST00000370496 PAFAH1B2P68402 229 aa11.13□□□□□ -0.63
COL9A1-204ENST00000370496 BAXQ07812 192 aa11.13□□□□□ -0.63
COL9A1-204ENST00000370496 THAP6Q8TBB0 222 aa11.13□□□□□ -0.63
COL9A1-204ENST00000370496 DOK5Q9P104 306 aa11.13□□□□□ -0.63
COL9A1-204ENST00000370496 HELTA6NFD8 242 aa11.12□□□□□ -0.63
COL9A1-204ENST00000370496 DNASE2O00115 360 aaPredicted RBP11.12□□□□□ -0.63
COL9A1-204ENST00000370496 GIPP09681 153 aaPredicted RBP11.12□□□□□ -0.63
COL9A1-204ENST00000370496 IGHV4-30-4P0DP06 118 aa11.12□□□□□ -0.63
COL9A1-204ENST00000370496 ORM2P19652 201 aa11.12□□□□□ -0.63
COL9A1-204ENST00000370496 RAB31Q13636 194 aa11.12□□□□□ -0.63
COL9A1-204ENST00000370496 Q8N1Y9 231 aa11.12□□□□□ -0.63
COL9A1-204ENST00000370496 GBGT1Q8N5D6 347 aa11.12□□□□□ -0.63
COL9A1-204ENST00000370496 STXBP6Q8NFX7 210 aa11.12□□□□□ -0.63
COL9A1-204ENST00000370496 OR5C1Q8NGR4 320 aa11.12□□□□□ -0.63
COL9A1-204ENST00000370496 OR1B1Q8NGR6 318 aa11.12□□□□□ -0.63
COL9A1-204ENST00000370496 ASB13Q8WXK3 278 aa11.12□□□□□ -0.63
COL9A1-204ENST00000370496 WFDC10AQ9H1F0 79 aa11.12□□□□□ -0.63
COL9A1-204ENST00000370496 TUBA4BQ9H853 241 aa11.12□□□□□ -0.63
COL9A1-204ENST00000370496 AGPAT2O15120 278 aa11.11□□□□□ -0.63
COL9A1-204ENST00000370496 S100A7P31151 101 aa11.11□□□□□ -0.63
COL9A1-204ENST00000370496 NHLH2Q02577 135 aa11.11□□□□□ -0.63
COL9A1-204ENST00000370496 CLINT1Q14677 625 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms