RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 TRGV4A0A0C4DH28 118 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 HIST1H2BKO60814 126 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 HIST1H2BJP06899 126 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 HIST1H2BOP23527 126 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 HIST1H2BBP33778 126 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 HIST1H2BDP58876 126 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 HIST1H2BCP62807 126 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 HIST2H2BEQ16778 126 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.43□□□□□ -0.74
HCFC1-202ENST00000369984 HIST1H2BHQ93079 126 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 HIST1H2BNQ99877 126 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 HIST1H2BMQ99879 126 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 OBSL1O75147 1896 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 TMEM238C9JI98 176 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 UMODP07911 640 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 MESP2Q0VG99 397 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 CECR9P0C854 216 aa10.42□□□□□ -0.74
HCFC1-202ENST00000369984 VDAC2P45880 294 aaPredicted RBP10.42□□□□□ -0.74
HCFC1-202ENST00000369984 SRSF3P84103 164 aaKnown RBP10.42□□□□□ -0.74
HCFC1-202ENST00000369984 TRAV14DV4A0A0A6YYC5 116 aa10.42□□□□□ -0.74
HCFC1-202ENST00000369984 C15orf61A6NNL5 157 aa10.42□□□□□ -0.74
HCFC1-202ENST00000369984 ZNF525Q8N782 197 aa10.42□□□□□ -0.74
HCFC1-202ENST00000369984 UBE2CO00762 179 aa10.42□□□□□ -0.74
HCFC1-202ENST00000369984 FAM201AQ5SY85 155 aa10.42□□□□□ -0.74
HCFC1-202ENST00000369984 ZNF362Q5T0B9 420 aaPredicted RBP10.42□□□□□ -0.74
HCFC1-202ENST00000369984 GTF3AQ92664 365 aaKnown RBP10.42□□□□□ -0.74
HCFC1-202ENST00000369984 EIF4EBP2Q13542 120 aaPredicted RBP10.42□□□□□ -0.74
HCFC1-202ENST00000369984 LINC00312Q9Y6C7 94 aa10.42□□□□□ -0.74
HCFC1-202ENST00000369984 PLXNB3Q9ULL4 1909 aa10.42□□□□□ -0.74
HCFC1-202ENST00000369984 C1QTNF9P0C862 333 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 DLX4Q92988 240 aaPredicted RBP10.41□□□□□ -0.74
HCFC1-202ENST00000369984 ROS1P08922 2347 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 F2Z2F3 143 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 TRACP01848 142 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 NEU4Q8WWR8 484 aaPredicted RBP10.41□□□□□ -0.74
HCFC1-202ENST00000369984 IGHV3-11P01762 117 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 COLCA1Q6ZS62 124 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 C1QTNF5Q9BXJ0 243 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 PLXNA2O75051 1894 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 TRAV41A0A0B4J266 112 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 GAGE12BA1L429 117 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 PSG1P11464 419 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 MED13Q9UHV7 2174 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 TCRBV4S1A1TA0A5B7 111 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 NBR2O15453 112 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 KIF26AQ9ULI4 1882 aaPredicted RBP10.41□□□□□ -0.74
HCFC1-202ENST00000369984 LINC01549A6NIU2 74 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 RFPL3SP0C7P2 107 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 CLPSL1A2RUU4 121 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 H3BMM0 161 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 EREGO14944 169 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 TIAF1O95411 115 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 PRB4P10163 310 aaPredicted RBP10.41□□□□□ -0.74
HCFC1-202ENST00000369984 UBE2WQ96B02 151 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 PRADC1Q9BSG0 188 aa10.41□□□□□ -0.74
HCFC1-202ENST00000369984 IGHV2OR16-5A0A0B4J2B6 119 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 PPBPP02775 128 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 SVIPQ8NHG7 77 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 FOXD3Q9UJU5 478 aaPredicted RBP10.4□□□□□ -0.74
HCFC1-202ENST00000369984 LOC102723996A0A087X1L8 192 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 FOXL1Q12952 345 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 CT83Q5H943 113 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 DEPPQ9NTK1 212 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 CHCHD2Q9Y6H1 151 aaPredicted RBP10.4□□□□□ -0.74
HCFC1-202ENST00000369984 PAX4O43316 350 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 CELA3BP08861 270 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 SRD5A1P18405 259 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 HSD52Q0P140 79 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 TMEM144Q7Z5S9 345 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 FAM216BQ8N7L0 139 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 RNF125Q96EQ8 232 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 SIGLEC12Q96PQ1 595 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 SLC50A1Q9BRV3 221 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 PPIFP30405 207 aaKnown RBP10.4□□□□□ -0.74
HCFC1-202ENST00000369984 RNF126Q9BV68 326 aa10.4□□□□□ -0.74
HCFC1-202ENST00000369984 TRAV8-3A0A0A6YYJ7 113 aa10.4□□□□□ -0.75
HCFC1-202ENST00000369984 RNF222A6NCQ9 220 aa10.4□□□□□ -0.75
HCFC1-202ENST00000369984 LEPROTO15243 131 aa10.4□□□□□ -0.75
HCFC1-202ENST00000369984 ZNF497Q6ZNH5 498 aa10.4□□□□□ -0.75
HCFC1-202ENST00000369984 FAM90A1Q86YD7 464 aa10.4□□□□□ -0.75
HCFC1-202ENST00000369984 FAM27E3Q08E93 113 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 C1QL4Q86Z23 238 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 INAFM2P0DMQ5 153 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 TMEM258P61165 79 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 C7orf69Q9H7B7 122 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 OSTCQ9NRP0 149 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 A0A087WX48 190 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 SIGLEC15Q6ZMC9 328 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 IFI27L1Q96BM0 104 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.39□□□□□ -0.75
HCFC1-202ENST00000369984 PVRIGQ6DKI7 326 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 C19orf48Q6RUI8 117 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 LSM4Q9Y4Z0 139 aaKnown RBP10.39□□□□□ -0.75
HCFC1-202ENST00000369984 PYYP10082 97 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 EFNB3Q15768 340 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 HEPN1Q6WQI6 88 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 ABHD17AQ96GS6 310 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 SPSB2Q99619 263 aa10.39□□□□□ -0.75
HCFC1-202ENST00000369984 ADAMTS7Q9UKP4 1686 aa10.38□□□□□ -0.75
HCFC1-202ENST00000369984 A0A087X0K7 114 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms