RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 OR4X2Q8NGF9 303 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 ZNRF4Q8WWF5 429 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 ZNF331Q9NQX6 463 aaPredicted RBP4.1□□□□□ -1.75
UBE3D-202ENST00000369746 TAAR3PQ9P1P4 343 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 MDFICQ9P1T7 246 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 LY96Q9Y6Y9 160 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 TRIOO75962 3097 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 PCNX1Q96RV3 2341 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 IGLV3-12A0A075B6K2 115 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 A0A1W2PS18 150 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 C15orf61A6NNL5 157 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 TMEM178BH3BS89 294 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 PRYO14603 147 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 PRRG2O14669 202 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 TTRP02766 147 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 PGFP49763 221 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 UBE2G1P62253 170 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 TNFAIP6P98066 277 aaPredicted RBP4.1□□□□□ -1.75
UBE3D-202ENST00000369746 C1orf100Q5SVJ3 147 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 Q6AWC8 147 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 OR8B12Q8NGG6 310 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 ARPC1AQ92747 370 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 OR4C12Q96R67 309 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 TMEM59Q9BXS4 323 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 HCFC1P51610 2035 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 NCKAP5O14513 1909 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 NBEAQ8NFP9 2946 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 A0A0U1RQV1 116 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 H3BMG7 143 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 ISLRO14498 428 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 SOCS1O15524 211 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 ZNF737O75373 536 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 FAM106CPP0CH98 169 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 COX8AP10176 69 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 G6PCP35575 357 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 EMDP50402 254 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 FOXF2Q12947 444 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 FAM106AQ4KMX7 169 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 GOLT1AQ6ZVE7 132 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 HSD11B1LQ7Z5J1 315 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 DEFB106AQ8N104 65 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 TSACCQ96A04 125 aaPredicted RBP4.09□□□□□ -1.75
UBE3D-202ENST00000369746 PDCD1LG2Q9BQ51 273 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 TMEM191AQ9H0A3 160 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 MRPL18Q9H0U6 180 aaKnown RBP4.09□□□□□ -1.75
UBE3D-202ENST00000369746 SH3BGRL3Q9H299 93 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 ZNF442Q9H7R0 627 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 PRTFDC1Q9NRG1 225 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 DEPPQ9NTK1 212 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 SOX21Q9Y651 276 aaPredicted RBP4.09□□□□□ -1.75
UBE3D-202ENST00000369746 SCN2AQ99250 2005 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 PRRC2AP48634 2157 aaKnown RBP4.09□□□□□ -1.75
UBE3D-202ENST00000369746 FNDC10F2Z333 226 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 SYS1-DBNDD2H3BUS1 97 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 RFPL3SP0C7P2 107 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 ACVRL1P37023 503 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 NDUFV3P56181 108 aaKnown RBP4.09□□□□□ -1.75
UBE3D-202ENST00000369746 CX3CL1P78423 397 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 IHHQ14623 411 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 MEIG1Q5JSS6 88 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 ANKRD37Q7Z713 158 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 RFLNBQ8N5W9 214 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 OR2A5Q96R48 311 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 PRADC1Q9BSG0 188 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 CLEC7AQ9BXN2 247 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 FGF22Q9HCT0 170 aa4.09□□□□□ -1.75
UBE3D-202ENST00000369746 DSPP15924 2871 aaKnown RBP4.09□□□□□ -1.76
UBE3D-202ENST00000369746 DOCK4Q8N1I0 1966 aa4.09□□□□□ -1.76
UBE3D-202ENST00000369746 FAM240AA0A1B0GVK7 77 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 WISP2O76076 250 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 CXorf1O96002 111 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 OR5AL1P0C617 328 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 FGF6P10767 208 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 ASIPP42127 132 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 APOC4P55056 127 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 SPATA12Q7Z6I5 190 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 OR9G1Q8NH87 305 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF721Q8TF20 911 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 RNASE6Q93091 150 aaKnown RBP4.08□□□□□ -1.76
UBE3D-202ENST00000369746 SPACA5Q96QH8 159 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 TMEM204Q9BSN7 226 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 TIMM9Q9Y5J7 89 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 MYO15AQ9UKN7 3530 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 TRGV10A0A0A0MS01 117 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 ZC3H12DA2A288 527 aaKnown RBP4.08□□□□□ -1.76
UBE3D-202ENST00000369746 KLF7O75840 302 aaPredicted RBP4.08□□□□□ -1.76
UBE3D-202ENST00000369746 HLA-DQA1P01909 254 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 IGLC6P0CF74 106 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 PEBP1P30086 187 aaKnown RBP4.08□□□□□ -1.76
UBE3D-202ENST00000369746 PSMB3P49720 205 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 RPS24P62847 133 aaKnown RBP4.08□□□□□ -1.76
UBE3D-202ENST00000369746 ARTNQ5T4W7 220 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 TRAPPC6BQ86SZ2 158 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 TMEM219Q86XT9 240 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 BPIFA4PQ86YQ2 179 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 GAPTQ8N292 157 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 OR5D14Q8NGL3 314 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 RTN4IP1Q8WWV3 396 aaPredicted RBP4.08□□□□□ -1.76
UBE3D-202ENST00000369746 TMEM70Q9BUB7 260 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms