RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ZNF876PQ49A33 203 aa14.97□□□□□ -0.01
SNX27-202ENST00000368841 TIMP3P35625 211 aa14.97□□□□□ -0.01
SNX27-202ENST00000368841 ZNRD1Q9P1U0 126 aa14.97□□□□□ -0.01
SNX27-202ENST00000368841 LAMTOR3Q9UHA4 124 aa14.97□□□□□ -0.01
SNX27-202ENST00000368841 J3QW42 95 aa14.97□□□□□ -0.01
SNX27-202ENST00000368841 DUTP33316 252 aaKnown RBP14.97□□□□□ -0.01
SNX27-202ENST00000368841 JPT2Q9H910 190 aa14.97□□□□□ -0.01
SNX27-202ENST00000368841 FAM90A1Q86YD7 464 aa14.97□□□□□ -0.01
SNX27-202ENST00000368841 GREB1Q4ZG55 1949 aa14.97□□□□□ -0.01
SNX27-202ENST00000368841 A0A0G2JNJ9 132 aa14.96□□□□□ -0.01
SNX27-202ENST00000368841 DEFB130BP0DP73 79 aa14.96□□□□□ -0.01
SNX27-202ENST00000368841 DEFB130AP0DP74 79 aa14.96□□□□□ -0.01
SNX27-202ENST00000368841 BMPERQ8N8U9 685 aa14.96□□□□□ -0.01
SNX27-202ENST00000368841 Q9UFV3 132 aa14.96□□□□□ -0.01
SNX27-202ENST00000368841 SRRM4A7MD48 611 aaKnown RBP14.96□□□□□ -0.01
SNX27-202ENST00000368841 LINC00114Q6XXX2 140 aa14.96□□□□□ -0.01
SNX27-202ENST00000368841 ZNF581Q9P0T4 197 aa14.96□□□□□ -0.01
SNX27-202ENST00000368841 GGTLC3B5MD39 225 aa14.96□□□□□ -0.02
SNX27-202ENST00000368841 DOCK4Q8N1I0 1966 aa14.95□□□□□ -0.02
SNX27-202ENST00000368841 IGHV1-3A0A0C4DH29 117 aa14.95□□□□□ -0.02
SNX27-202ENST00000368841 C5orf63A6NC05 138 aa14.95□□□□□ -0.02
SNX27-202ENST00000368841 CD177Q8N6Q3 437 aa14.95□□□□□ -0.02
SNX27-202ENST00000368841 LAGE3Q14657 143 aa14.95□□□□□ -0.02
SNX27-202ENST00000368841 RP1P56715 2156 aa14.95□□□□□ -0.02
SNX27-202ENST00000368841 PSG1P11464 419 aa14.95□□□□□ -0.02
SNX27-202ENST00000368841 STAG3L3P0CL85 134 aa14.95□□□□□ -0.02
SNX27-202ENST00000368841 PRCDQ00LT1 54 aa14.95□□□□□ -0.02
SNX27-202ENST00000368841 DTX2Q86UW9 622 aa14.95□□□□□ -0.02
SNX27-202ENST00000368841 WNK3Q9BYP7 1800 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 IGHV3-16A0A0C4DH30 117 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 BTCP35070 178 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 LYZL1Q6UWQ5 148 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 LYPD2Q6UXB3 125 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 TRAV13-1A0A0B4J241 112 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 ATP5IP56385 69 aaPredicted RBP14.94□□□□□ -0.02
SNX27-202ENST00000368841 ATP5L2Q7Z4Y8 100 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 LAMTOR2Q9Y2Q5 125 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 CD59P13987 128 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 ANAPC13Q9BS18 74 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 hDV102S1A0JD36 115 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 Q6AWC8 147 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 IGKV1-12A0A0C4DH73 117 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 TOMM40O96008 361 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 IGKV1D-12P01611 117 aa14.94□□□□□ -0.02
SNX27-202ENST00000368841 IGKV1-27A0A075B6S5 117 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 F8VVB4 439 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 F8VWA3 439 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 SH2D1AO60880 128 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 COL8A2P25067 703 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 CARHSP1Q9Y2V2 147 aaKnown RBP14.93□□□□□ -0.02
SNX27-202ENST00000368841 SCN5AQ14524 2016 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 Q0VFX4 171 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 MGST2Q99735 147 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 ZNF883P0CG24 379 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 RNF144BQ7Z419 303 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 IGHV1-8P0DP01 117 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 ZNF138P52744 262 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 TPTE2P1Q5T6R2 138 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 PIP4P2Q8N4L2 257 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 CFHR1Q03591 330 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 C1orf159Q96HA4 380 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 PRDM13Q9H4Q3 707 aa14.93□□□□□ -0.02
SNX27-202ENST00000368841 THADAQ6YHU6 1953 aa14.92□□□□□ -0.02
SNX27-202ENST00000368841 A8MXK9 166 aa14.92□□□□□ -0.02
SNX27-202ENST00000368841 FAM166AQ6J272 317 aa14.92□□□□□ -0.02
SNX27-202ENST00000368841 TMEM170AQ8WVE7 144 aa14.92□□□□□ -0.02
SNX27-202ENST00000368841 GFI1Q99684 422 aa14.92□□□□□ -0.02
SNX27-202ENST00000368841 ABCA7Q8IZY2 2146 aa14.92□□□□□ -0.02
SNX27-202ENST00000368841 C5orf30Q96GV9 206 aa14.92□□□□□ -0.02
SNX27-202ENST00000368841 A0A1B0GW15 77 aa14.92□□□□□ -0.02
SNX27-202ENST00000368841 TMEM86BQ8N661 226 aa14.92□□□□□ -0.02
SNX27-202ENST00000368841 KLHDC3Q9BQ90 382 aa14.92□□□□□ -0.02
SNX27-202ENST00000368841 C14orf178Q8N769 122 aaPredicted RBP14.92□□□□□ -0.02
SNX27-202ENST00000368841 TP53BP1Q12888 1972 aaPredicted RBP14.92□□□□□ -0.02
SNX27-202ENST00000368841 H0YIZ8 118 aa14.91□□□□□ -0.02
SNX27-202ENST00000368841 SSC4DQ8WTU2 575 aa14.91□□□□□ -0.02
SNX27-202ENST00000368841 KNCNA6PVL3 124 aa14.91□□□□□ -0.02
SNX27-202ENST00000368841 E9PLN8 166 aa14.91□□□□□ -0.02
SNX27-202ENST00000368841 PRR30Q53SZ7 412 aaPredicted RBP14.91□□□□□ -0.02
SNX27-202ENST00000368841 RNF223E7ERA6 249 aa14.91□□□□□ -0.02
SNX27-202ENST00000368841 IL17RELQ6ZVW7 336 aa14.91□□□□□ -0.02
SNX27-202ENST00000368841 CXCL1P09341 107 aa14.91□□□□□ -0.02
SNX27-202ENST00000368841 LINC00587B1AMM8 73 aa14.91□□□□□ -0.02
SNX27-202ENST00000368841 IFI6P09912 130 aa14.91□□□□□ -0.02
SNX27-202ENST00000368841 PLNP26678 52 aa14.91□□□□□ -0.02
SNX27-202ENST00000368841 MSRB2Q9Y3D2 182 aa14.91□□□□□ -0.02
SNX27-202ENST00000368841 FLVCR1-AS1Q8TAF5 88 aa14.9□□□□□ -0.02
SNX27-202ENST00000368841 IFI27L1Q96BM0 104 aa14.9□□□□□ -0.02
SNX27-202ENST00000368841 TRAV8-1A0A0A6YYK1 113 aa14.9□□□□□ -0.02
SNX27-202ENST00000368841 MLANAQ16655 118 aa14.9□□□□□ -0.02
SNX27-202ENST00000368841 GGNQ86UU5 652 aa14.9□□□□□ -0.02
SNX27-202ENST00000368841 CSTL1Q9H114 145 aa14.9□□□□□ -0.02
SNX27-202ENST00000368841 OVOL1O14753 267 aa14.9□□□□□ -0.02
SNX27-202ENST00000368841 SAMD5Q5TGI4 173 aa14.9□□□□□ -0.02
SNX27-202ENST00000368841 TREML4Q6UXN2 200 aa14.9□□□□□ -0.02
SNX27-202ENST00000368841 TMEM178BH3BS89 294 aa14.9□□□□□ -0.02
SNX27-202ENST00000368841 PSPNO60542 156 aa14.89□□□□□ -0.03
SNX27-202ENST00000368841 ORMDL2Q53FV1 153 aa14.89□□□□□ -0.03
SNX27-202ENST00000368841 LY6G6FQ5SQ64 297 aa14.89□□□□□ -0.03
SNX27-202ENST00000368841 EFNA2O43921 213 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms