RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 HSPB7Q9UBY9 170 aa11.53□□□□□ -0.56
CKS1B-202ENST00000368436 RABL2BQ9UNT1 228 aa11.53□□□□□ -0.56
CKS1B-202ENST00000368436 ANKRD20A5PA0PJZ0 165 aa11.52□□□□□ -0.57
CKS1B-202ENST00000368436 ALDH3B2P48448 385 aa11.52□□□□□ -0.57
CKS1B-202ENST00000368436 CLVS1Q8IUQ0 354 aaPredicted RBP11.52□□□□□ -0.57
CKS1B-202ENST00000368436 OR51G1Q8NGK1 321 aa11.52□□□□□ -0.57
CKS1B-202ENST00000368436 PRR13Q9NZ81 148 aa11.52□□□□□ -0.57
CKS1B-202ENST00000368436 XCL2Q9UBD3 114 aa11.52□□□□□ -0.57
CKS1B-202ENST00000368436 KCNIP3Q9Y2W7 256 aa11.52□□□□□ -0.57
CKS1B-202ENST00000368436 U3KQ87 197 aa11.52□□□□□ -0.57
CKS1B-202ENST00000368436 DEFB131BA0A096LNP1 70 aa11.51□□□□□ -0.57
CKS1B-202ENST00000368436 IFNA10P01566 189 aa11.51□□□□□ -0.57
CKS1B-202ENST00000368436 AMBPP02760 352 aa11.51□□□□□ -0.57
CKS1B-202ENST00000368436 HLA-DRB4P13762 266 aa11.51□□□□□ -0.57
CKS1B-202ENST00000368436 NKX2-1P43699 371 aaPredicted RBP11.51□□□□□ -0.57
CKS1B-202ENST00000368436 CCR6P51684 374 aa11.51□□□□□ -0.57
CKS1B-202ENST00000368436 DIRAS2Q96HU8 199 aa11.51□□□□□ -0.57
CKS1B-202ENST00000368436 HLA-DRB4X5D2U9 266 aa11.51□□□□□ -0.57
CKS1B-202ENST00000368436 A0A0B4J2A0 478 aa11.5□□□□□ -0.57
CKS1B-202ENST00000368436 ATP5IP56385 69 aaPredicted RBP11.5□□□□□ -0.57
CKS1B-202ENST00000368436 SUPT4H1P63272 117 aaKnown RBP11.5□□□□□ -0.57
CKS1B-202ENST00000368436 KLF9Q13886 244 aaPredicted RBP11.5□□□□□ -0.57
CKS1B-202ENST00000368436 IL18Q14116 193 aa11.5□□□□□ -0.57
CKS1B-202ENST00000368436 SMCO1Q147U7 214 aa11.5□□□□□ -0.57
CKS1B-202ENST00000368436 ZNF705AQ6ZN79 300 aaPredicted RBP11.5□□□□□ -0.57
CKS1B-202ENST00000368436 ZNF767PQ75MW2 155 aa11.5□□□□□ -0.57
CKS1B-202ENST00000368436 GPR141Q7Z602 305 aa11.5□□□□□ -0.57
CKS1B-202ENST00000368436 LGI3Q8N145 548 aa11.5□□□□□ -0.57
CKS1B-202ENST00000368436 DTD1Q8TEA8 209 aa11.5□□□□□ -0.57
CKS1B-202ENST00000368436 RNF125Q96EQ8 232 aa11.5□□□□□ -0.57
CKS1B-202ENST00000368436 SCGB3A2Q96PL1 93 aa11.5□□□□□ -0.57
CKS1B-202ENST00000368436 NEU1Q99519 415 aa11.5□□□□□ -0.57
CKS1B-202ENST00000368436 MRPS26Q9BYN8 205 aaKnown RBP11.5□□□□□ -0.57
CKS1B-202ENST00000368436 RBKSQ9H477 322 aa11.5□□□□□ -0.57
CKS1B-202ENST00000368436 SHPKQ9UHJ6 478 aa11.5□□□□□ -0.57
CKS1B-202ENST00000368436 IGKV1D-37A0A075B6S9 117 aa11.49□□□□□ -0.57
CKS1B-202ENST00000368436 GPX4P36969 197 aaPredicted RBP11.49□□□□□ -0.57
CKS1B-202ENST00000368436 NUP62P37198 522 aaPredicted RBP11.49□□□□□ -0.57
CKS1B-202ENST00000368436 OR8G2PQ6IF36 304 aa11.49□□□□□ -0.57
CKS1B-202ENST00000368436 LYZL2Q7Z4W2 148 aa11.49□□□□□ -0.57
CKS1B-202ENST00000368436 DYNC2LI1Q8TCX1 351 aa11.49□□□□□ -0.57
CKS1B-202ENST00000368436 CLUHP3Q96NS8 147 aa11.49□□□□□ -0.57
CKS1B-202ENST00000368436 SCP2D1Q9UJQ7 156 aa11.49□□□□□ -0.57
CKS1B-202ENST00000368436 ZNF705FA8MVS1 300 aaPredicted RBP11.48□□□□□ -0.57
CKS1B-202ENST00000368436 ZNF705DP0CH99 300 aaPredicted RBP11.48□□□□□ -0.57
CKS1B-202ENST00000368436 ZNF705BP0CI00 300 aaPredicted RBP11.48□□□□□ -0.57
CKS1B-202ENST00000368436 GAMTQ14353 236 aa11.48□□□□□ -0.57
CKS1B-202ENST00000368436 GDF5OSQ5U4N7 250 aa11.48□□□□□ -0.57
CKS1B-202ENST00000368436 LINC00336Q6ZUF6 198 aa11.48□□□□□ -0.57
CKS1B-202ENST00000368436 WDR12Q9GZL7 423 aaKnown RBP11.48□□□□□ -0.57
CKS1B-202ENST00000368436 SAV1Q9H4B6 383 aaPredicted RBP11.48□□□□□ -0.57
CKS1B-202ENST00000368436 CCDC59Q9P031 241 aaKnown RBP11.48□□□□□ -0.57
CKS1B-202ENST00000368436 PFDN2Q9UHV9 154 aa11.48□□□□□ -0.57
CKS1B-202ENST00000368436 DNAH17Q9UFH2 4485 aa11.48□□□□□ -0.57
CKS1B-202ENST00000368436 FAT2Q9NYQ8 4349 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 SMIM9A6NGZ8 99 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 P0DMU3 169 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 FAM231AP0DMU4 169 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 FAM231CP0DMU5 169 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 AKR1C4P17516 323 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 ZNF90Q03938 601 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 C1orf194Q5T5A4 169 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 POM121L12Q8N7R1 296 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 SOSTQ9BQB4 213 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 PBDC1Q9BVG4 233 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 SCRT1Q9BWW7 348 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 RSL24D1Q9UHA3 163 aaKnown RBP11.47□□□□□ -0.57
CKS1B-202ENST00000368436 DNAH2Q9P225 4427 aa11.47□□□□□ -0.57
CKS1B-202ENST00000368436 ZFP92A6NM28 416 aa11.46□□□□□ -0.57
CKS1B-202ENST00000368436 SOCS3O14543 225 aa11.46□□□□□ -0.57
CKS1B-202ENST00000368436 PITX3O75364 302 aa11.46□□□□□ -0.57
CKS1B-202ENST00000368436 SPART-AS1P0CW21 52 aa11.46□□□□□ -0.57
CKS1B-202ENST00000368436 PSMB3P49720 205 aa11.46□□□□□ -0.57
CKS1B-202ENST00000368436 DEFB1P60022 68 aa11.46□□□□□ -0.57
CKS1B-202ENST00000368436 SRPXP78539 464 aa11.46□□□□□ -0.57
CKS1B-202ENST00000368436 FOXI2Q6ZQN5 318 aa11.46□□□□□ -0.57
CKS1B-202ENST00000368436 SLC35E1Q96K37 410 aa11.46□□□□□ -0.57
CKS1B-202ENST00000368436 NDUFAF3Q9BU61 184 aa11.46□□□□□ -0.57
CKS1B-202ENST00000368436 KIAA1109Q2LD37 5005 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 TMEM189A5PLL7 270 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 IGKV3-20P01619 116 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 ANXA3P12429 323 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 ID1P41134 155 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 ZNF709Q8N972 641 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 OR1S1Q8NH92 325 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 RAB2BQ8WUD1 216 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 LINC00052Q96N35 136 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 BCL7BQ9BQE9 202 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 KRTAP3-3Q9BYR6 98 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 KRTAP3-2Q9BYR7 98 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 MCUBQ9NWR8 336 aa11.45□□□□□ -0.58
CKS1B-202ENST00000368436 PIGBOS1A0A0B4J2F0 54 aa11.44□□□□□ -0.58
CKS1B-202ENST00000368436 A0A1B0GVY2 172 aa11.44□□□□□ -0.58
CKS1B-202ENST00000368436 DUXBA0A1W2PPF3 345 aa11.44□□□□□ -0.58
CKS1B-202ENST00000368436 SNRPGP15A8MWD9 76 aa11.44□□□□□ -0.58
CKS1B-202ENST00000368436 FABP1P07148 127 aa11.44□□□□□ -0.58
CKS1B-202ENST00000368436 TMBIM6P55061 237 aa11.44□□□□□ -0.58
CKS1B-202ENST00000368436 FXYD7P58549 80 aa11.44□□□□□ -0.58
CKS1B-202ENST00000368436 LYZP61626 148 aa11.44□□□□□ -0.58
CKS1B-202ENST00000368436 ZNF79Q15937 498 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms