RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SLAQ13239 276 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 FAM162BQ5T6X4 162 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 C18orf32Q8TCD1 76 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 FAM103A1Q9BTL3 118 aaKnown RBP11.44□□□□□ -0.58
CD48-201ENST00000368045 INSIG2Q9Y5U4 225 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 ZNF318Q5VUA4 2279 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 IGHV3-72A0A0B4J1Y9 119 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 IGHV1-3A0A0C4DH29 117 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 A0A1B0GXF2 115 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 BUB1B-PAK6H3BSN5 160 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 CD3EP07766 207 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 PMCHP20382 165 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 GNG5P63218 68 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 TDRG1Q3Y452 100 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 SPACA3Q8IXA5 215 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 TMEM14CQ9P0S9 112 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 SH3BGRL2Q9UJC5 107 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 PAM16Q9Y3D7 125 aa11.43□□□□□ -0.58
CD48-201ENST00000368045 DSPP15924 2871 aaKnown RBP11.42□□□□□ -0.58
CD48-201ENST00000368045 TEX22C9J3V5 150 aa11.42□□□□□ -0.58
CD48-201ENST00000368045 PLAUP00749 431 aa11.42□□□□□ -0.58
CD48-201ENST00000368045 LTAP01374 205 aa11.42□□□□□ -0.58
CD48-201ENST00000368045 PPP1R27Q86WC6 154 aa11.42□□□□□ -0.58
CD48-201ENST00000368045 NIT1Q86X76 327 aa11.42□□□□□ -0.58
CD48-201ENST00000368045 BLNKQ8WV28 456 aa11.42□□□□□ -0.58
CD48-201ENST00000368045 RPP21Q9H633 154 aaKnown RBP11.42□□□□□ -0.58
CD48-201ENST00000368045 HIGD1AQ9Y241 93 aa11.42□□□□□ -0.58
CD48-201ENST00000368045 ICE1Q9Y2F5 2266 aa11.42□□□□□ -0.58
CD48-201ENST00000368045 HIGD1CA8MV81 97 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 A8MWL6 223 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 PRR27Q6MZM9 219 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 PRSS33Q8NF86 280 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 BORCS7Q96B45 105 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 VKORC1Q9BQB6 163 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 PRSS22Q9GZN4 317 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 GFRA4Q9GZZ7 299 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 OTORQ9NRC9 128 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 RNF114Q9Y508 228 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 CNOT1A5YKK6 2376 aaKnown RBP11.41□□□□□ -0.58
CD48-201ENST00000368045 TTC28Q96AY4 2481 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 FAM231BA6NCW3 169 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 TCRAP04437 139 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 CTRLP40313 264 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 MMDQ15546 238 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 GDF5OSQ5U4N7 250 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 ZNF841Q6ZN19 808 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 ALKBH7Q9BT30 221 aaPredicted RBP11.41□□□□□ -0.58
CD48-201ENST00000368045 Q9H3A6 140 aa11.41□□□□□ -0.58
CD48-201ENST00000368045 TRBV6-1A0A0K0K1D8 114 aa11.4□□□□□ -0.58
CD48-201ENST00000368045 C19orf71A6NCJ1 209 aa11.4□□□□□ -0.58
CD48-201ENST00000368045 RPLP1P05386 114 aaKnown RBP11.4□□□□□ -0.58
CD48-201ENST00000368045 C3orf79P0CE67 100 aa11.4□□□□□ -0.58
CD48-201ENST00000368045 HBBP68871 147 aa11.4□□□□□ -0.58
CD48-201ENST00000368045 RUSC1-AS1Q66K80 236 aa11.4□□□□□ -0.58
CD48-201ENST00000368045 RNF24Q9Y225 148 aa11.4□□□□□ -0.58
CD48-201ENST00000368045 CUL9Q8IWT3 2517 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 P01737 135 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 IGLC1P0CG04 106 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 CNTFRP26992 372 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 NBL1P41271 181 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 PMCHL1Q16048 86 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 RPEQ96AT9 228 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 LOC400499M0QZD8 3231 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 PPIAL4CA0A0B4J2A2 164 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.39□□□□□ -0.59
CD48-201ENST00000368045 LY6LH3BQJ8 138 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 I3L2K1 104 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 HSBP1O75506 76 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 FAM87AP0C7U9 286 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 PPIAL4GP0DN37 164 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 SPATA45Q537H7 98 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 KLHDC1Q8N7A1 406 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 SRSF12Q8WXF0 261 aaKnown RBP11.39□□□□□ -0.59
CD48-201ENST00000368045 DAZAP1Q96EP5 407 aaKnown RBP11.39□□□□□ -0.59
CD48-201ENST00000368045 UQCR10Q9UDW1 63 aa11.39□□□□□ -0.59
CD48-201ENST00000368045 C20orf202A1L168 122 aa11.38□□□□□ -0.59
CD48-201ENST00000368045 NPIPB6E9PJ23 425 aa11.38□□□□□ -0.59
CD48-201ENST00000368045 CYB5R2Q6BCY4 276 aa11.38□□□□□ -0.59
CD48-201ENST00000368045 NBEAQ8NFP9 2946 aa11.38□□□□□ -0.59
CD48-201ENST00000368045 PSG1P11464 419 aa11.37□□□□□ -0.59
CD48-201ENST00000368045 HOXB4P17483 251 aaPredicted RBP11.37□□□□□ -0.59
CD48-201ENST00000368045 NTF3P20783 257 aa11.37□□□□□ -0.59
CD48-201ENST00000368045 RBPMS2Q6ZRY4 209 aaKnown RBP11.37□□□□□ -0.59
CD48-201ENST00000368045 Q86TA4 180 aa11.37□□□□□ -0.59
CD48-201ENST00000368045 RASL11BQ9BPW5 248 aa11.37□□□□□ -0.59
CD48-201ENST00000368045 SLC25A39Q9BZJ4 359 aaPredicted RBP11.37□□□□□ -0.59
CD48-201ENST00000368045 FBXL15Q9H469 300 aa11.37□□□□□ -0.59
CD48-201ENST00000368045 RPH3ALQ9UNE2 315 aa11.37□□□□□ -0.59
CD48-201ENST00000368045 CAMPP49913 170 aa11.36□□□□□ -0.59
CD48-201ENST00000368045 LYZP61626 148 aa11.36□□□□□ -0.59
CD48-201ENST00000368045 FBXL19-AS1Q494R0 122 aa11.36□□□□□ -0.59
CD48-201ENST00000368045 DMRTA1Q5VZB9 504 aa11.36□□□□□ -0.59
CD48-201ENST00000368045 FAM19A2Q8N3H0 131 aa11.36□□□□□ -0.59
CD48-201ENST00000368045 LY6G5BQ8NDX9 201 aa11.36□□□□□ -0.59
CD48-201ENST00000368045 OR8B3Q8NGG8 313 aa11.36□□□□□ -0.59
CD48-201ENST00000368045 OR8B2Q96RD0 313 aa11.36□□□□□ -0.59
CD48-201ENST00000368045 SPENQ96T58 3664 aaKnown RBP11.36□□□□□ -0.59
CD48-201ENST00000368045 IGHV3-21A0A0B4J1V1 117 aa11.36□□□□□ -0.59
CD48-201ENST00000368045 FAM181BA6NEQ2 426 aa11.36□□□□□ -0.59
CD48-201ENST00000368045 VWC2LB2RUY7 222 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms