RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 MMDQ15546 238 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 Q8N6K4 173 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 ZNF738Q8NE65 137 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 OR10P1Q8NGE3 313 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 ABHD5Q8WTS1 349 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 ALKBH7Q9BT30 221 aaPredicted RBP9.63□□□□□ -0.87
USF1-203ENST00000368021 C20orf24Q9BUV8 137 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 TPSG1Q9NRR2 321 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 AURKAIP1Q9NWT8 199 aaPredicted RBP9.63□□□□□ -0.87
USF1-203ENST00000368021 C2CD3Q4AC94 2353 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 ACTL6BO94805 426 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 CXCL1P09341 107 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 FAM106CPP0CH98 169 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 MYOD1P15172 320 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 TMEM170AQ8WVE7 144 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 VPS25Q9BRG1 176 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 PYGO2Q9BRQ0 406 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 HINT2Q9BX68 163 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 PARD6GQ9BYG4 376 aaPredicted RBP9.63□□□□□ -0.87
USF1-203ENST00000368021 CDC42EP3Q9UKI2 254 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 TRAV30A0A087WSZ9 112 aa9.62□□□□□ -0.87
USF1-203ENST00000368021 PRH1P02810 166 aa9.62□□□□□ -0.87
USF1-203ENST00000368021 COMPP49747 757 aaPredicted RBP9.62□□□□□ -0.87
USF1-203ENST00000368021 RAB11AP62491 216 aa9.62□□□□□ -0.87
USF1-203ENST00000368021 SLC38A11Q08AI6 406 aa9.62□□□□□ -0.87
USF1-203ENST00000368021 HES1Q14469 280 aa9.62□□□□□ -0.87
USF1-203ENST00000368021 BSXQ3C1V8 233 aa9.62□□□□□ -0.87
USF1-203ENST00000368021 ZNF506Q5JVG8 444 aa9.62□□□□□ -0.87
USF1-203ENST00000368021 IL17RELQ6ZVW7 336 aa9.62□□□□□ -0.87
USF1-203ENST00000368021 OR4B1Q8NGF8 309 aa9.62□□□□□ -0.87
USF1-203ENST00000368021 P2RX4Q99571 388 aa9.62□□□□□ -0.87
USF1-203ENST00000368021 FBXL15Q9H469 300 aa9.62□□□□□ -0.87
USF1-203ENST00000368021 RPH3ALQ9UNE2 315 aa9.62□□□□□ -0.87
USF1-203ENST00000368021 XKRY2A2RUG3 117 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 E7EUB6 86 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 F6UZH7 168 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 IFNA5P01569 189 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 NPY1RP25929 384 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 MEGF9Q9H1U4 602 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 NAV3Q8IVL0 2385 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 CGB1A6NKQ9 187 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 PRSS46E5RG02 174 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 SCGB1D1O95968 90 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 IGHV4-38-2P0DP08 117 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 CD24P25063 80 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 RPL27AP46776 148 aaKnown RBP9.61□□□□□ -0.87
USF1-203ENST00000368021 ERHP84090 104 aaKnown RBP9.61□□□□□ -0.87
USF1-203ENST00000368021 PLGLAQ15195 96 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 C5orf64Q2M2E5 130 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 VWC2Q2TAL6 325 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 C2orf83Q53S99 150 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 PDZD11Q5EBL8 140 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 GFI1BQ5VTD9 330 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 GBGT1Q8N5D6 347 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 RNASE8Q8TDE3 154 aaKnown RBP9.61□□□□□ -0.87
USF1-203ENST00000368021 GNPNAT1Q96EK6 184 aaPredicted RBP9.61□□□□□ -0.87
USF1-203ENST00000368021 SRSF8Q9BRL6 282 aaKnown RBP9.61□□□□□ -0.87
USF1-203ENST00000368021 TMEM147Q9BVK8 224 aa9.61□□□□□ -0.87
USF1-203ENST00000368021 AVPP01185 164 aa9.6□□□□□ -0.87
USF1-203ENST00000368021 SRP19P09132 144 aaKnown RBP9.6□□□□□ -0.87
USF1-203ENST00000368021 TNXAQ16473 311 aa9.6□□□□□ -0.87
USF1-203ENST00000368021 C10orf55Q5SWW7 151 aa9.6□□□□□ -0.87
USF1-203ENST00000368021 RUSC1-AS1Q66K80 236 aa9.6□□□□□ -0.87
USF1-203ENST00000368021 TEX43Q6ZNM6 134 aa9.6□□□□□ -0.87
USF1-203ENST00000368021 KLHDC1Q8N7A1 406 aa9.6□□□□□ -0.87
USF1-203ENST00000368021 OR10W1Q8NGF6 305 aa9.6□□□□□ -0.87
USF1-203ENST00000368021 OR5B12Q96R08 314 aa9.6□□□□□ -0.87
USF1-203ENST00000368021 C1RLQ9NZP8 487 aa9.6□□□□□ -0.87
USF1-203ENST00000368021 TGIF2-C20orf24A0A0A6YYL0 155 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 SOX15O60248 233 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 CA2P00918 260 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 TYMSP04818 313 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 NBEAP1P0C6P0 100 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 OR13C7P0DN81 318 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 RNASE2P10153 161 aaKnown RBP9.59□□□□□ -0.87
USF1-203ENST00000368021 ATP6V0CP27449 155 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 SSBP2P81877 361 aaPredicted RBP9.59□□□□□ -0.87
USF1-203ENST00000368021 WT1-ASQ06250 92 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 PSG3Q16557 428 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 LRRC75BQ2VPJ9 315 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 FBLN7Q53RD9 439 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 KLF17Q5JT82 389 aaPredicted RBP9.59□□□□□ -0.87
USF1-203ENST00000368021 TEX38Q6PEX7 206 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 BRD3OSQ6XYD6 125 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 TCF24Q7RTU0 167 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 OR4X1Q8NH49 305 aa9.59□□□□□ -0.87
USF1-203ENST00000368021 IGHV3OR16-10A0A075B7F0 116 aa9.59□□□□□ -0.88
USF1-203ENST00000368021 IGLC7A0M8Q6 106 aa9.59□□□□□ -0.88
USF1-203ENST00000368021 FNDC10F2Z333 226 aa9.59□□□□□ -0.88
USF1-203ENST00000368021 FCN1O00602 326 aa9.59□□□□□ -0.88
USF1-203ENST00000368021 FAM120AOSQ5T036 256 aa9.59□□□□□ -0.88
USF1-203ENST00000368021 ZNF114Q8NC26 417 aa9.59□□□□□ -0.88
USF1-203ENST00000368021 OR4C5Q8NGB2 326 aa9.59□□□□□ -0.88
USF1-203ENST00000368021 SCGB1C1Q8TD33 95 aa9.59□□□□□ -0.88
USF1-203ENST00000368021 SRSF12Q8WXF0 261 aaKnown RBP9.59□□□□□ -0.88
USF1-203ENST00000368021 WDR61Q9GZS3 305 aaKnown RBP9.59□□□□□ -0.88
USF1-203ENST00000368021 TRAV1-1A0A0B4J248 108 aa9.58□□□□□ -0.88
USF1-203ENST00000368021 A0A0U1RQK1 487 aa9.58□□□□□ -0.88
USF1-203ENST00000368021 NCBP2LA6PVI3 153 aaKnown RBP9.58□□□□□ -0.88
USF1-203ENST00000368021 MDKP21741 143 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms