RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PRB1P04280 392 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 ZPLD1Q8TCW7 415 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF355PQ9NSJ1 428 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 DLL3Q9NYJ7 618 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 MRPS18BQ9Y676 258 aaKnown RBP3.11□□□□□ -1.91
SYNE1-207ENST00000367255 MALP21145 153 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 UCN2Q96RP3 112 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF142P52746 1687 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-207ENST00000367255 H0YJW9 148 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 CD69Q07108 199 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 P0DMU3 169 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 FAM231AP0DMU4 169 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 FAM231CP0DMU5 169 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 IGFBP2P18065 325 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 CRIPAKQ8N1N5 446 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 TMEM89A2RUT3 159 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 TFF1P04155 84 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 MFAP4P55083 255 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 DSCR9P59020 149 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 ZNRF2Q8NHG8 242 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 SMAD7O15105 426 aaKnown RBP3.11□□□□□ -1.91
SYNE1-207ENST00000367255 FOXG1P55316 489 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-207ENST00000367255 Q6ZSR6 202 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 DDB2Q92466 427 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 PHLDA3Q9Y5J5 127 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 LTAP01374 205 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 C8orf86Q6ZUL3 223 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 SMIM2Q9BVW6 85 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 FAM90A27PA6NNH2 459 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 CNTFRP26992 372 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 TCF19Q9Y242 345 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 ABCA4P78363 2273 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 AHDC1Q5TGY3 1603 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-207ENST00000367255 K7EM74 188 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 UBE2L6O14933 153 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 SCN2AQ99250 2005 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 A0A0B4J2C4 111 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF137PP52743 207 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 CSRP2Q16527 193 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 Q6ZT83 130 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 LINC00311Q8N616 119 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 C9orf139Q6ZV77 190 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 KIAA1217Q5T5P2 1943 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF826PQ6ZT77 177 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF664Q8N3J9 261 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 PFN1P07737 140 aaKnown RBP3.1□□□□□ -1.91
SYNE1-207ENST00000367255 ZFP2Q6ZN57 461 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 POLR2AP24928 1970 aaKnown RBP3.1□□□□□ -1.91
SYNE1-207ENST00000367255 KIAA0100Q14667 2235 aaKnown RBP3.1□□□□□ -1.91
SYNE1-207ENST00000367255 CACNA1IQ9P0X4 2223 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 DYNLT3P51808 116 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 LTN1O94822 1766 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 TNXAQ16473 311 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 DEFB133Q30KQ1 61 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 PRNTQ86SH4 94 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 CALYQ9NYX4 217 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 CCL26Q9Y258 94 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 TDGF1P13385 188 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 TMEM14BQ9NUH8 114 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.1□□□□□ -1.91
SYNE1-207ENST00000367255 M0R1W7 72 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 CNFNQ9BYD5 112 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 VN1R4Q7Z5H5 301 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 MOSP00540 346 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 QRFPP83859 136 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 ZCCHC24Q8N2G6 241 aaKnown RBP3.1□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF688P0C7X2 276 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 FXYD5Q96DB9 178 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 ABCA3Q99758 1704 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 FABP5P3A8MUU1 101 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 LMO1P25800 156 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 FAM53AQ6NSI3 398 aaPredicted RBP3.1□□□□□ -1.91
SYNE1-207ENST00000367255 C12orf49Q9H741 205 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 SUPT4H1P63272 117 aaKnown RBP3.1□□□□□ -1.91
SYNE1-207ENST00000367255 FAM60AQ9NP50 221 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF580Q9UK33 172 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 COL10A1Q03692 680 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 KIAA2026Q5HYC2 2103 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 ZFP36L2P47974 494 aaKnown RBP3.1□□□□□ -1.91
SYNE1-207ENST00000367255 CD164L2Q6UWJ8 174 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 RPL11P62913 178 aaKnown RBP3.1□□□□□ -1.91
SYNE1-207ENST00000367255 CACNA1GO43497 2377 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 EVPLQ92817 2033 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 LYPD3O95274 346 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 CXorf66Q5JRM2 361 aaPredicted RBP3.1□□□□□ -1.91
SYNE1-207ENST00000367255 FAM74A4Q5TZK3 123 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 TMEM54Q969K7 222 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 GNG7O60262 68 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 SERF1AO75920 110 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 LYZL2Q7Z4W2 148 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 CCL8P80075 99 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 LINC00173Q6ZV60 143 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 CNIH1O95406 144 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 HERVK_113P63121 156 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 CENPWQ5EE01 88 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 FAM110AQ9BQ89 295 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 COX8CQ7Z4L0 72 aa3.1□□□□□ -1.91
SYNE1-207ENST00000367255 CD24P25063 80 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 ADIPOQQ15848 244 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 MRPL55Q7Z7F7 128 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms