RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ABHD17AQ96GS6 310 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 IGHV1-18A0A0C4DH31 117 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 M0R1W7 72 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 LEPP41159 167 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 SPRR3Q9UBC9 169 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 TRAV21A0A0B4J279 112 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 UQCRFS1P47985 274 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 FOXA3P55318 350 aaPredicted RBP9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 LINC01551Q86U37 167 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 IGKV1D-8A0A087WSZ0 117 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 DSCAMO60469 2012 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 HIST3H2BBQ8N257 126 aa9.96□□□□□ -0.81
CDC42BPA-203ENST00000366766 AKIRIN1Q9H9L7 192 aaPredicted RBP9.96□□□□□ -0.81
CDC42BPA-203ENST00000366766 OVOL1O14753 267 aa9.96□□□□□ -0.81
CDC42BPA-203ENST00000366766 LINC00614P0C842 121 aa9.96□□□□□ -0.81
CDC42BPA-203ENST00000366766 TANC2Q9HCD6 1990 aa9.96□□□□□ -0.81
CDC42BPA-203ENST00000366766 EFNA2O43921 213 aa9.96□□□□□ -0.81
CDC42BPA-203ENST00000366766 GFRA3O60609 400 aa9.96□□□□□ -0.81
CDC42BPA-203ENST00000366766 CMC4P56277 68 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPA-203ENST00000366766 ACTL10Q5JWF8 245 aa9.96□□□□□ -0.82
CDC42BPA-203ENST00000366766 GFRA4Q9GZZ7 299 aa9.96□□□□□ -0.82
CDC42BPA-203ENST00000366766 TTC32Q5I0X7 151 aa9.96□□□□□ -0.82
CDC42BPA-203ENST00000366766 MDS2Q8NDY4 140 aa9.96□□□□□ -0.82
CDC42BPA-203ENST00000366766 TMEM160Q9NX00 188 aa9.96□□□□□ -0.82
CDC42BPA-203ENST00000366766 CYSLTR1Q9Y271 337 aa9.96□□□□□ -0.82
CDC42BPA-203ENST00000366766 CGB1A6NKQ9 187 aa9.96□□□□□ -0.82
CDC42BPA-203ENST00000366766 WFDC1Q9HC57 220 aa9.96□□□□□ -0.82
CDC42BPA-203ENST00000366766 DPM2O94777 84 aa9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 TLN1Q9Y490 2541 aaKnown RBP9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 MBD3L4A6NDZ8 208 aaPredicted RBP9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 MBD3L3A6NE82 208 aaPredicted RBP9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 MBD3L5A6NJ08 208 aaPredicted RBP9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 CT83Q5H943 113 aa9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 RPP25LQ8N5L8 163 aaKnown RBP9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 MBD3L2Q8NHZ7 208 aaPredicted RBP9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 TMEM167AQ8TBQ9 72 aa9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 FAM231BA6NCW3 169 aa9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 FAM74A4Q5TZK3 123 aa9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 SLC25A39Q9BZJ4 359 aaPredicted RBP9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 RNASE7Q9H1E1 156 aaKnown RBP9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 IGKV3-15P01624 115 aa9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 OR9G9P0C7N8 305 aa9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 C20orf204Q6ZNR8 217 aa9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 OCC1Q8TAD7 63 aa9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 CRXO43186 299 aaPredicted RBP9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 GATA4P43694 442 aa9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 MBNL3Q9NUK0 354 aaKnown RBP9.95□□□□□ -0.82
CDC42BPA-203ENST00000366766 OTOGLQ3ZCN5 2332 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 DTX1Q86Y01 620 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 A0A087WV48 116 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 EGR1P18146 543 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 CENPVQ7Z7K6 275 aaPredicted RBP9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 TNFSF13O75888 250 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 IGHV1-46P01743 117 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 SUMO2P61956 95 aaKnown RBP9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 TMEM170BQ5T4T1 132 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 M0R381 172 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 IGHG3P01860 377 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 SNRPCP09234 159 aaKnown RBP9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 YAE1D1Q9NRH1 226 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 FOXF2Q12947 444 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 Q6P435 159 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 TMEM50AO95807 157 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 IFI27P40305 119 aaPredicted RBP9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 FHL1Q13642 323 aa9.94□□□□□ -0.82
CDC42BPA-203ENST00000366766 TRBV7-1A0A0A6YYK4 115 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 SCGB1A1P11684 91 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 PLNP26678 52 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 TRGV11A0A075B6L2 103 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 IGKV1-5P01602 117 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 THBDP07204 575 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 ARTNQ5T4W7 220 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 COLCA1Q6ZS62 124 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 ATOH7Q8N100 152 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 JMJD8Q96S16 334 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 MGST2Q99735 147 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 SLC25A15Q9Y619 301 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 A0A1B0GWJ7 208 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 PGPEP1LA6NFU8 196 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 NUP210LQ5VU65 1888 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 TMEM262E9PQX1 116 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 ADMP35318 185 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 BMPERQ8N8U9 685 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 IGHV3-48P01763 117 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 SRSF3P84103 164 aaKnown RBP9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 F11RQ9Y624 299 aaKnown RBP9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 B3GALT5-AS1P59052 145 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 LINC01560Q8TB33 94 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 PSG8Q9UQ74 426 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 HSD52Q0P140 79 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 FOXC2Q99958 501 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 CD55P08174 381 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 C1QTNF9P0C862 333 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 IGHV1-8P0DP01 117 aa9.93□□□□□ -0.82
CDC42BPA-203ENST00000366766 TRAV8-6A0A0B4J262 113 aa9.92□□□□□ -0.82
CDC42BPA-203ENST00000366766 LMO1P25800 156 aa9.92□□□□□ -0.82
CDC42BPA-203ENST00000366766 MEIG1Q5JSS6 88 aa9.92□□□□□ -0.82
CDC42BPA-203ENST00000366766 TMEM178BH3BS89 294 aa9.92□□□□□ -0.82
CDC42BPA-203ENST00000366766 ERVK11-1P61568 191 aa9.92□□□□□ -0.82
CDC42BPA-203ENST00000366766 IGHV2-26A0A0B4J1V2 119 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms