RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 GPX1P07203 203 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 HSD52Q0P140 79 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 GCSAMLQ5JQS6 135 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 LYPD1Q8N2G4 141 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 H7C1H1 209 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 WNT2P09544 360 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 ARPC1AQ92747 370 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 FOXC1Q12948 553 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 MUC15Q8N387 334 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 SRSF8Q9BRL6 282 aaKnown RBP9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 PSPNO60542 156 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 CIRBPQ14011 172 aaKnown RBP9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 AMMECR1LQ6DCA0 310 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 FAM57AQ8TBR7 257 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 NBR2O15453 112 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 BSPH1Q075Z2 132 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 FAM106AQ4KMX7 169 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 DSCAMO60469 2012 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 PAX1P15863 534 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 FOXI3A8MTJ6 420 aaPredicted RBP9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 IL18BPO95998 194 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 LOXL3P58215 753 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 TEX29Q8N6K0 151 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 C9orf106Q8NAJ2 232 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 JKAMPQ9P055 326 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 SETD2Q9BYW2 2564 aaPredicted RBP9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 C7orf71A4D174 169 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 C5orf63A6NC05 138 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 PGPEP1LA6NFU8 196 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 LGALS3P17931 250 aaKnown RBP9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 MRPL16Q9NX20 251 aaKnown RBP9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 CACNG7P62955 275 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 SNRPCP09234 159 aaKnown RBP9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 PLSCR4Q9NRQ2 329 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 ZNF664Q8N3J9 261 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 F11RQ9Y624 299 aaKnown RBP9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 SPCS1Q9Y6A9 102 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 TMEM14BQ9NUH8 114 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 CCDC168Q8NDH2 2452 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 H3BVH4 76 aa9.74□□□□□ -0.85
CDC42BPA-202ENST00000366764 ZNHIT1O43257 154 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 Q6ZRM9 215 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 RNF144BQ7Z419 303 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 BMPERQ8N8U9 685 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 COA6Q5JTJ3 125 aaKnown RBP9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 SEPSECSQ9HD40 501 aaKnown RBP9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 PEAR1Q5VY43 1037 aaPredicted RBP9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 DERL1Q9BUN8 251 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 SLC25A2Q9BXI2 301 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 IGKV1-6A0A0C4DH72 117 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 SPOCK3Q9BQ16 436 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 SNRPD3P62318 126 aaKnown RBP9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 FABP5P3A8MUU1 101 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 PDE6HQ13956 83 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 NEU4Q8WWR8 484 aaPredicted RBP9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 DPF1Q92782 380 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 IGHV3-48P01763 117 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 ORMDL2Q53FV1 153 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 GAGE1Q13065 139 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 C3orf36Q3SXR2 165 aa9.73□□□□□ -0.85
CDC42BPA-202ENST00000366764 CEP295Q9C0D2 2601 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 A0A0G2JLM5 398 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 C9orf172C9J069 976 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 FOXH1O75593 365 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 TMEM256Q8N2U0 113 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 NUDT10Q8NFP7 164 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 NUDT11Q96G61 164 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 SPRR3Q9UBC9 169 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 TMEM167AQ8TBQ9 72 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 RAXQ9Y2V3 346 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 DPM2O94777 84 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 IGKV3-15P01624 115 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 SSBP4Q9BWG4 385 aaPredicted RBP9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 NCOR2Q9Y618 2525 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 LINC00473A8K010 186 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 ZNF585BQ52M93 769 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 MDS2Q8NDY4 140 aa9.72□□□□□ -0.85
CDC42BPA-202ENST00000366764 GATA2P23769 480 aaPredicted RBP9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 TMPRSS3P57727 454 aa9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 SLC25A39Q9BZJ4 359 aaPredicted RBP9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 H3BTX0 84 aa9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 ASIPP42127 132 aa9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 GATA4P43694 442 aa9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 ARHGAP32A7KAX9 2087 aa9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 ERVK11-1P61568 191 aa9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 C20orf204Q6ZNR8 217 aa9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 PINLYPA6NC86 204 aa9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 RPRMLQ8N4K4 120 aa9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 RNF166Q96A37 237 aaPredicted RBP9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 UBTD1Q9HAC8 227 aa9.71□□□□□ -0.85
CDC42BPA-202ENST00000366764 COL4A3Q01955 1670 aa9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 IGHV1-18A0A0C4DH31 117 aa9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 YPEL3P61236 119 aaPredicted RBP9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 FBXL15Q9H469 300 aa9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 LOC102724200A0A096LPH7 203 aaPredicted RBP9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 A0A1W2PRD5 423 aa9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 A0A1W2PRF3 423 aa9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 A0A1W2PRM7 423 aa9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 OOSP1A8MZH6 123 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms