RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 TRAV3A0A0B4J244 114 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 HIST1H2BKO60814 126 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 HIST1H2BJP06899 126 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 PSG1P11464 419 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 HIST1H2BOP23527 126 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 HIST1H2BBP33778 126 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 HIST1H2BDP58876 126 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 HIST1H2BCP62807 126 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 LAGE3Q14657 143 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 HIST2H2BEQ16778 126 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.24□□□□□ -0.45
COL11A2-202ENST00000361917 TPTE2P1Q5T6R2 138 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 HIST1H2BHQ93079 126 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 NABP1Q96AH0 204 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 CHCHD1Q96BP2 118 aaKnown RBP12.24□□□□□ -0.45
COL11A2-202ENST00000361917 HIST1H2BNQ99877 126 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 HIST1H2BMQ99879 126 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 SLC25A39Q9BZJ4 359 aaPredicted RBP12.24□□□□□ -0.45
COL11A2-202ENST00000361917 PPBPP02775 128 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 GLRX5Q86SX6 157 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 DMRTC2Q8IXT2 367 aaPredicted RBP12.24□□□□□ -0.45
COL11A2-202ENST00000361917 TNFRSF14Q92956 283 aa12.24□□□□□ -0.45
COL11A2-202ENST00000361917 C5orf24Q7Z6I8 188 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 IFI27L1Q96BM0 104 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 TPRP12270 2363 aaKnown RBP12.23□□□□□ -0.45
COL11A2-202ENST00000361917 PLNP26678 52 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 MBD3L1Q8WWY6 194 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 GGTLC1Q9BX51 225 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 GNLYP22749 145 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 ZNF474Q6S9Z5 364 aaPredicted RBP12.23□□□□□ -0.45
COL11A2-202ENST00000361917 ATP5L2Q7Z4Y8 100 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 PRADC1Q9BSG0 188 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 RPUSD1Q9UJJ7 312 aaKnown RBP12.23□□□□□ -0.45
COL11A2-202ENST00000361917 CKS1BP61024 79 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 ORAOV1Q8WV07 137 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 MGST2Q99735 147 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 SLC25A2Q9BXI2 301 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 PLSCR4Q9NRQ2 329 aa12.23□□□□□ -0.45
COL11A2-202ENST00000361917 D6R8Y8 96 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 TMEM178BH3BS89 294 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 MST1P26927 711 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 HEATR5BQ9P2D3 2071 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 HGFACQ04756 655 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 TAF1LQ8IZX4 1826 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 PSPNO60542 156 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 KLF17Q5JT82 389 aaPredicted RBP12.22□□□□□ -0.45
COL11A2-202ENST00000361917 IGFL4Q6B9Z1 124 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 EFNA4P52798 201 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 SPOCK3Q9BQ16 436 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 CRIM1Q9NZV1 1036 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 M0R2P5 195 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 TCRAP04437 139 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 ACTL10Q5JWF8 245 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 CST9LQ9H4G1 147 aa12.22□□□□□ -0.45
COL11A2-202ENST00000361917 SRRM5B3KS81 715 aa12.21□□□□□ -0.45
COL11A2-202ENST00000361917 GHRHP01286 108 aa12.21□□□□□ -0.45
COL11A2-202ENST00000361917 MPZP25189 248 aa12.21□□□□□ -0.45
COL11A2-202ENST00000361917 Q0VFX4 171 aa12.21□□□□□ -0.45
COL11A2-202ENST00000361917 SRSF7Q16629 238 aaKnown RBP eCLIP12.21□□□□□ -0.45
COL11A2-202ENST00000361917 TMEM86BQ8N661 226 aa12.21□□□□□ -0.45
COL11A2-202ENST00000361917 RP1P56715 2156 aa12.21□□□□□ -0.45
COL11A2-202ENST00000361917 TRGV1A0A0A0MS02 117 aa12.21□□□□□ -0.45
COL11A2-202ENST00000361917 CXCL1P09341 107 aa12.21□□□□□ -0.45
COL11A2-202ENST00000361917 ASCL4Q6XD76 172 aa12.21□□□□□ -0.45
COL11A2-202ENST00000361917 NYNRINQ9P2P1 1898 aaKnown RBP12.21□□□□□ -0.45
COL11A2-202ENST00000361917 LYZL1Q6UWQ5 148 aa12.21□□□□□ -0.46
COL11A2-202ENST00000361917 FGF16O43320 207 aa12.21□□□□□ -0.46
COL11A2-202ENST00000361917 GATD1Q8NB37 220 aa12.21□□□□□ -0.46
COL11A2-202ENST00000361917 DOCK4Q8N1I0 1966 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 GGTLC3B5MD39 225 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 RFNGQ9Y644 331 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 RALGAPA2Q2PPJ7 1873 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 SVILO95425 2214 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 WDR90Q96KV7 1748 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 H3BUX3 64 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 DSCR9P59020 149 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 ZNF876PQ49A33 203 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 DEFB121Q5J5C9 76 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 UBE2CO00762 179 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 SRSF6Q13247 344 aaKnown RBP12.2□□□□□ -0.46
COL11A2-202ENST00000361917 LILRA1O75019 489 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 Q8TAT8 98 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 A0A0G2JNJ9 132 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 C5orf63A6NC05 138 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 FCN3O75636 299 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 TMEM249Q2WGJ8 235 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 HEPN1Q6WQI6 88 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 Q9UFV3 132 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 ASXL3Q9C0F0 2248 aa12.2□□□□□ -0.46
COL11A2-202ENST00000361917 A0A087WX48 190 aa12.19□□□□□ -0.46
COL11A2-202ENST00000361917 SRRM4A7MD48 611 aaKnown RBP12.19□□□□□ -0.46
COL11A2-202ENST00000361917 SH2D1AO60880 128 aa12.19□□□□□ -0.46
COL11A2-202ENST00000361917 NDUFAF3Q9BU61 184 aa12.19□□□□□ -0.46
COL11A2-202ENST00000361917 A0A1B0GWJ7 208 aa12.19□□□□□ -0.46
COL11A2-202ENST00000361917 IL18BPO95998 194 aa12.19□□□□□ -0.46
COL11A2-202ENST00000361917 SLC25A48Q6ZT89 311 aaKnown RBP12.19□□□□□ -0.46
COL11A2-202ENST00000361917 H0YJW9 148 aa12.18□□□□□ -0.46
COL11A2-202ENST00000361917 ZNF479Q96JC4 524 aa12.18□□□□□ -0.46
COL11A2-202ENST00000361917 GAFA1Q96PS6 74 aa12.18□□□□□ -0.46
COL11A2-202ENST00000361917 LSM4Q9Y4Z0 139 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms