RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 RNF224P0DH78 156 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 KIAA1644Q3SXP7 199 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 ATG101Q9BSB4 218 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 PRR14LQ5THK1 2151 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 M0R381 172 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 CIARTQ8N365 385 aaPredicted RBP11.25□□□□□ -0.61
CTR9-201ENST00000361367 NAV2Q8IVL1 2488 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 TRAV5A0A0B4J249 113 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 FAM181BA6NEQ2 426 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 C15orf62A8K5M9 175 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 SLC17A3O00476 420 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 BTF3P20290 206 aaKnown RBP11.25□□□□□ -0.61
CTR9-201ENST00000361367 ZNF56Q15929 161 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 C11orf53Q8IXP5 236 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 GSX1Q9H4S2 264 aaPredicted RBP11.25□□□□□ -0.61
CTR9-201ENST00000361367 C15orf65H3BRN8 121 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 ASIPP42127 132 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 TCF24Q7RTU0 167 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 GLMPQ8WWB7 406 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 CDC42EP3Q9UKI2 254 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 KIAA1549LQ6ZVL6 1849 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 FBLL1A6NHQ2 334 aaKnown RBP11.24□□□□□ -0.61
CTR9-201ENST00000361367 RNASE2P10153 161 aaKnown RBP11.24□□□□□ -0.61
CTR9-201ENST00000361367 TRGV9Q99603 122 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 LIME1Q9H400 295 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 BEX4Q9NWD9 120 aaPredicted RBP11.24□□□□□ -0.61
CTR9-201ENST00000361367 EPDR1Q9UM22 224 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 A0A1W2PPI3 338 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.24□□□□□ -0.61
CTR9-201ENST00000361367 SMAGPQ0VAQ4 97 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 DUX3Q96PT4 197 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 ALPK3Q96L96 1907 aa11.24□□□□□ -0.61
CTR9-201ENST00000361367 TMEM131Q92545 1883 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 LINC00311Q8N616 119 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 OR5AN1Q8NGI8 311 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 MBD3L1Q8WWY6 194 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 USMG5Q96IX5 58 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 MGST2Q99735 147 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 HERVK_113P61574 105 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 Q8NFD4 153 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 MAP1LC3AQ9H492 121 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 TRBV7-1A0A0A6YYK4 115 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 SRIP30626 198 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 RPL15P61313 204 aaKnown RBP11.23□□□□□ -0.61
CTR9-201ENST00000361367 HBBP68871 147 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 CCL20P78556 96 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 ZNF833PQ6ZTB9 187 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 PIP4P2Q8N4L2 257 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 REG4Q9BYZ8 158 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 CYTL1Q9NRR1 136 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 DENND4AQ7Z401 1863 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 OR4C46A6NHA9 309 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 PMS2P5A8MQ11 134 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 C22orf46C9J442 243 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 STAG3L2P0CL84 134 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 STAG3L3P0CL85 134 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 TMEM97Q5BJF2 176 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 AMMECR1LQ6DCA0 310 aa11.23□□□□□ -0.61
CTR9-201ENST00000361367 CARHSP1Q9Y2V2 147 aaKnown RBP11.23□□□□□ -0.61
CTR9-201ENST00000361367 DOCK11Q5JSL3 2073 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 A8MXK9 166 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 FGF16O43320 207 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 RPP25LQ8N5L8 163 aaKnown RBP11.22□□□□□ -0.61
CTR9-201ENST00000361367 SCRT1Q9BWW7 348 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 CTSZQ9UBR2 303 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 HIVEP2P31629 2446 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 NCOA6Q14686 2063 aaPredicted RBP11.22□□□□□ -0.61
CTR9-201ENST00000361367 GRIFINA4D1Z8 144 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 RNASE4P34096 147 aaKnown RBP11.22□□□□□ -0.61
CTR9-201ENST00000361367 SIGLEC15Q6ZMC9 328 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 LINC01587Q99440 93 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 MUC21A0A0G2JKD1 596 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 MUC21A0A140T8X8 626 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 CNTFRP26992 372 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 MLANAQ16655 118 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 MUC21Q5SSG8 566 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 STHQ8IWL8 128 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 SRSF8Q9BRL6 282 aaKnown RBP11.22□□□□□ -0.61
CTR9-201ENST00000361367 SLC25A39Q9BZJ4 359 aaPredicted RBP11.22□□□□□ -0.61
CTR9-201ENST00000361367 SDF2L1Q9HCN8 221 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 SEPSECSQ9HD40 501 aaKnown RBP11.22□□□□□ -0.61
CTR9-201ENST00000361367 KLF2Q9Y5W3 355 aaPredicted RBP11.22□□□□□ -0.61
CTR9-201ENST00000361367 SELENOKQ9Y6D0 94 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 ARFGEF3Q5TH69 2177 aa11.22□□□□□ -0.61
CTR9-201ENST00000361367 CBY3A6NI87 242 aa11.21□□□□□ -0.61
CTR9-201ENST00000361367 IGHV2-70P01814 119 aa11.21□□□□□ -0.61
CTR9-201ENST00000361367 ZNF134P52741 427 aa11.21□□□□□ -0.61
CTR9-201ENST00000361367 Q1RN00 199 aa11.21□□□□□ -0.61
CTR9-201ENST00000361367 FGF23Q9GZV9 251 aaPredicted RBP11.21□□□□□ -0.61
CTR9-201ENST00000361367 FABP5P3A8MUU1 101 aa11.21□□□□□ -0.61
CTR9-201ENST00000361367 KRTAP27-1Q3LI81 207 aa11.21□□□□□ -0.61
CTR9-201ENST00000361367 SPATA31B1PQ5VZV4 182 aa11.21□□□□□ -0.61
CTR9-201ENST00000361367 RPP21Q9H633 154 aaKnown RBP11.21□□□□□ -0.61
CTR9-201ENST00000361367 A0A1B0GUT8 65 aa11.21□□□□□ -0.62
CTR9-201ENST00000361367 DUSP14O95147 198 aaKnown RBP11.21□□□□□ -0.62
CTR9-201ENST00000361367 CBLN1P23435 193 aa11.21□□□□□ -0.62
CTR9-201ENST00000361367 RNF166Q96A37 237 aaPredicted RBP11.21□□□□□ -0.62
CTR9-201ENST00000361367 MUC22E2RYF6 1773 aaPredicted RBP11.21□□□□□ -0.62
CTR9-201ENST00000361367 TRBV20OR9-2A0A075B6H5 130 aa11.21□□□□□ -0.62
CTR9-201ENST00000361367 J3QLI3 93 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms