RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 SLC35E1Q96K37 410 aa10.53□□□□□ -0.72
SQSTM1-201ENST00000360718 TIMM23O14925 209 aa10.52□□□□□ -0.73
SQSTM1-201ENST00000360718 ITPR3Q14573 2671 aa10.52□□□□□ -0.73
SQSTM1-201ENST00000360718 GATA3P23771 443 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 PRCDQ00LT1 54 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 RNF5Q99942 180 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 TECRQ9NZ01 308 aaKnown RBP10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 SCGB1D1O95968 90 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 HNF1AP20823 631 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 TAS2R45P59539 299 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 SELENOTP62341 195 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 PAFAH1B2P68402 229 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 LOXL1Q08397 574 aaPredicted RBP10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 SPATA31B1PQ5VZV4 182 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 LINC01356Q8N9X3 169 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 MISP3Q96FF7 219 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 EAF1Q96JC9 268 aaPredicted RBP10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 RITA1Q96K30 269 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 COMMD5Q9GZQ3 224 aa10.51□□□□□ -0.73
SQSTM1-201ENST00000360718 PLXNB1O43157 2135 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 TRBV9A0A0B4J1U6 114 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 HELTA6NFD8 242 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 RNF223E7ERA6 249 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 SLC25A17O43808 307 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 LINC00869P0C866 280 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 ADMP35318 185 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 RPL8P62917 257 aaKnown RBP10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 PSG5Q15238 335 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 PRSS8Q16651 343 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 RPEL1Q2QD12 228 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 PQLC2Q6ZP29 291 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 DYNAPQ8N1N2 210 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 TMEM167AQ8TBQ9 72 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 MS4A10Q96PG2 267 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 C7orf69Q9H7B7 122 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 HIF1ANQ9NWT6 349 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 ZFHX3Q15911 3703 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 CREBBPQ92793 2442 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 NPFFO15130 113 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 IGLV2-23P01705 113 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 OR10J1P30954 320 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 SAA4P35542 130 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 GNG4P50150 75 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 C2orf83Q53S99 150 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 TEX45Q8NA69 505 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 OR5B3Q8NH48 314 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 CMTM2Q8TAZ6 248 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 RBM14Q96PK6 669 aaKnown RBP10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 NEU1Q99519 415 aa10.5□□□□□ -0.73
SQSTM1-201ENST00000360718 CENPVL3A0A0U1RRI6 287 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 TPPP2P59282 170 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 ERVFC1-1P60608 527 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 USF2Q15853 346 aaPredicted RBP10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 COX19Q49B96 90 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 FBLN7Q53RD9 439 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 MIR17HGQ75NE6 70 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 TMEM256Q8N2U0 113 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 AJUBAQ96IF1 538 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 Q96MF0 132 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 TEX50A0A1B0GTY4 177 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 K7EN84 100 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 ACTL6BO94805 426 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 MOSP00540 346 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 CRISP2P16562 243 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 RANP62826 216 aaKnown RBP10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 HES1Q14469 280 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 OR1L8Q8NGR8 309 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 CFHR4Q92496 578 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 RNF2Q99496 336 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 MRPL18Q9H0U6 180 aaKnown RBP10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 NAGKQ9UJ70 344 aa10.49□□□□□ -0.73
SQSTM1-201ENST00000360718 IGHV1-69DA0A0B4J2H0 117 aa10.48□□□□□ -0.73
SQSTM1-201ENST00000360718 IGHV1-69P01742 117 aa10.48□□□□□ -0.73
SQSTM1-201ENST00000360718 OR10J4P0C629 311 aa10.48□□□□□ -0.73
SQSTM1-201ENST00000360718 BRS3P32247 399 aa10.48□□□□□ -0.73
SQSTM1-201ENST00000360718 NUTF2P61970 127 aaKnown RBP10.48□□□□□ -0.73
SQSTM1-201ENST00000360718 TIGITQ495A1 244 aa10.48□□□□□ -0.73
SQSTM1-201ENST00000360718 MMD2Q8IY49 270 aa10.48□□□□□ -0.73
SQSTM1-201ENST00000360718 OR1L6Q8NGR2 347 aa10.48□□□□□ -0.73
SQSTM1-201ENST00000360718 TEX15Q9BXT5 2789 aa10.48□□□□□ -0.73
SQSTM1-201ENST00000360718 IGHV3OR16-10A0A075B7F0 116 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 TRAV40A0A0B4J280 105 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 SLC17A3O00476 420 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 MYOD1P15172 320 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 PLGLAQ15195 96 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 PIP4P2Q8N4L2 257 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 CACNG8Q8WXS5 425 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 ZNF430Q9H8G1 570 aaPredicted RBP10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 CSPG4Q6UVK1 2322 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 ABCA1O95477 2261 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 FCN1O00602 326 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 TCAPO15273 167 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 OR7C2O60412 319 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 AVPP01185 164 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 MT-ND6P03923 174 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 ESDP10768 282 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 ERHP84090 104 aaKnown RBP10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 MMDQ15546 238 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 C1orf194Q5T5A4 169 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms