RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 UNQ5815/PRO19632Q6UWF5 114 aa11.13□□□□□ -0.63
CSNK1E-201ENST00000359867 NPVFQ9HCQ7 196 aa11.13□□□□□ -0.63
CSNK1E-201ENST00000359867 TET2Q6N021 2002 aaPredicted RBP11.13□□□□□ -0.63
CSNK1E-201ENST00000359867 RPL8P62917 257 aaKnown RBP11.13□□□□□ -0.63
CSNK1E-201ENST00000359867 WFDC12Q8WWY7 111 aa11.13□□□□□ -0.63
CSNK1E-201ENST00000359867 Q96MF0 132 aa11.13□□□□□ -0.63
CSNK1E-201ENST00000359867 AKAP9Q99996 3911 aa11.13□□□□□ -0.63
CSNK1E-201ENST00000359867 CREBBPQ92793 2442 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 RNF223E7ERA6 249 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 BUB1B-PAK6H3BSN5 160 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 CA2P00918 260 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 ACOT6Q3I5F7 207 aaPredicted RBP11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 VMA21Q3ZAQ7 101 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 TREML4Q6UXN2 200 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 WFDC11Q8NEX6 87 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 OR1L8Q8NGR8 309 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 ANAPC16Q96DE5 110 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 HINT2Q9BX68 163 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 COMMD5Q9GZQ3 224 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 IGLV2-23P01705 113 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 MYOD1P15172 320 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 CNN1P51911 297 aaKnown RBP11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 C2orf83Q53S99 150 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 LDLRAD2Q5SZI1 272 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 TPTE2P1Q5T6R2 138 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 LINC01551Q86U37 167 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 Q8N7P7 452 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 NDUFA4L2Q9NRX3 87 aa11.12□□□□□ -0.63
CSNK1E-201ENST00000359867 A0A096LNT2 108 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 M0R1W7 72 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 SLC25A16P16260 332 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 OPRK1P41145 380 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 KCNIP4Q6PIL6 250 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 TEX43Q6ZNM6 134 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 OR4C5Q8NGB2 326 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 KCNIP2Q9NS61 270 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 ONECUT1Q9UBC0 465 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 TRAPPC1Q9Y5R8 145 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 MYO9AB2RTY4 2548 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 GRIFINA4D1Z8 144 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 TOMM40O96008 361 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 ERASQ7Z444 233 aa11.11□□□□□ -0.63
CSNK1E-201ENST00000359867 ARF6P62330 175 aa11.1□□□□□ -0.63
CSNK1E-201ENST00000359867 RPL19P84098 196 aaKnown RBP11.1□□□□□ -0.63
CSNK1E-201ENST00000359867 Q6ZWC4 215 aa11.1□□□□□ -0.63
CSNK1E-201ENST00000359867 TEX45Q8NA69 505 aa11.1□□□□□ -0.63
CSNK1E-201ENST00000359867 LSM4Q9Y4Z0 139 aaKnown RBP11.1□□□□□ -0.63
CSNK1E-201ENST00000359867 INSIG2Q9Y5U4 225 aa11.1□□□□□ -0.63
CSNK1E-201ENST00000359867 SRP14P37108 136 aaKnown RBP11.1□□□□□ -0.63
CSNK1E-201ENST00000359867 ERHP84090 104 aaKnown RBP11.1□□□□□ -0.63
CSNK1E-201ENST00000359867 OR4P4Q8NGL7 312 aa11.1□□□□□ -0.63
CSNK1E-201ENST00000359867 VN1R17PQ8TDU5 208 aa11.1□□□□□ -0.63
CSNK1E-201ENST00000359867 FLNAP21333 2647 aaKnown RBP11.1□□□□□ -0.63
CSNK1E-201ENST00000359867 CR1P17927 2039 aa11.1□□□□□ -0.63
CSNK1E-201ENST00000359867 IGHV1-3A0A0C4DH29 117 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 A0A1W2PPV4 95 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 LY6LH3BQJ8 138 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 FBLN7Q53RD9 439 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 C1orf122Q6ZSJ8 110 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 OR11H6Q8NGC7 330 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 IMMP2LQ96T52 175 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 VAMP8Q9BV40 100 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 TRBV20OR9-2A0A075B6H5 130 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 F6UZH7 168 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 BMI1P35226 326 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 RPL15P61313 204 aaKnown RBP11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 RAB31Q13636 194 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 TEPPQ6URK8 271 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 SGMS2Q8NHU3 365 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 MGST2Q99735 147 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 RNF5Q99942 180 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 COX11Q9Y6N1 276 aa11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 SETXQ7Z333 2677 aaKnown RBP11.09□□□□□ -0.63
CSNK1E-201ENST00000359867 IGHV2-70DA0A0C4DH43 119 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 ENSAO43768 121 aaKnown RBP11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 VENTXO95231 258 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 ARL14EPLP0DKL9 152 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 RNASE2P10153 161 aaKnown RBP11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 COX7A1P24310 79 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 ADMP35318 185 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 PAX2Q02962 417 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 TMEM183BQ1AE95 376 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 TMEM249Q2WGJ8 235 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 OCIAD2Q56VL3 154 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 MIC13Q5XKP0 118 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 PNKDQ8N490 385 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 KIR3DL3Q8N743 410 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 RPEQ96AT9 228 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 GGTLC1Q9BX51 225 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.08□□□□□ -0.645e-7■■□□□ 14.3
CSNK1E-201ENST00000359867 SCO2A0A1W2PP80 73 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 FOXH1O75593 365 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 TYMSP04818 313 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 PRSS57Q6UWY2 283 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 SSMEM1Q8WWF3 244 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 CST9LQ9H4G1 147 aa11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 ZNF430Q9H8G1 570 aaPredicted RBP11.08□□□□□ -0.64
CSNK1E-201ENST00000359867 TRAV34A0A0B4J273 112 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 PRTN3P24158 256 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 RIPPLY3P57055 190 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms