RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 ZNF491Q8N8L2 437 aa19.24■□□□□ 0.67
SHARPIN-201ENST00000359551 RCC1LQ96I51 464 aaKnown RBP19.24■□□□□ 0.67
SHARPIN-201ENST00000359551 TGOLN2O43493 480 aa19.24■□□□□ 0.67
SHARPIN-201ENST00000359551 FAM209BQ5JX69 171 aa19.24■□□□□ 0.67
SHARPIN-201ENST00000359551 PXDC1Q5TGL8 231 aa19.24■□□□□ 0.67
SHARPIN-201ENST00000359551 LYPD6BQ8NI32 183 aa19.24■□□□□ 0.67
SHARPIN-201ENST00000359551 ZNF414Q96IQ9 312 aa19.24■□□□□ 0.67
SHARPIN-201ENST00000359551 C19orf24Q9BVV8 132 aa19.24■□□□□ 0.67
SHARPIN-201ENST00000359551 OR2C1O95371 312 aa19.22■□□□□ 0.67
SHARPIN-201ENST00000359551 OR5AU1Q8NGC0 362 aa19.22■□□□□ 0.67
SHARPIN-201ENST00000359551 OR4X2Q8NGF9 303 aa19.22■□□□□ 0.67
SHARPIN-201ENST00000359551 OR51G1Q8NGK1 321 aa19.22■□□□□ 0.67
SHARPIN-201ENST00000359551 GATAD1Q8WUU5 269 aa19.22■□□□□ 0.67
SHARPIN-201ENST00000359551 MBD3L1Q8WWY6 194 aa19.22■□□□□ 0.67
SHARPIN-201ENST00000359551 TMEM37Q8WXS4 190 aa19.22■□□□□ 0.67
SHARPIN-201ENST00000359551 UBE2E2Q96LR5 201 aa19.22■□□□□ 0.67
SHARPIN-201ENST00000359551 ACTR3CQ9C0K3 210 aaPredicted RBP19.22■□□□□ 0.67
SHARPIN-201ENST00000359551 IGHV3-11P01762 117 aa19.21■□□□□ 0.67
SHARPIN-201ENST00000359551 FAM122CQ6P4D5 195 aa19.21■□□□□ 0.67
SHARPIN-201ENST00000359551 SSX7Q7RTT5 188 aa19.21■□□□□ 0.67
SHARPIN-201ENST00000359551 OR1L4Q8NGR5 311 aa19.21■□□□□ 0.67
SHARPIN-201ENST00000359551 OR4F5Q8NH21 305 aa19.21■□□□□ 0.67
SHARPIN-201ENST00000359551 CTXND1A0A1B0GTU2 59 aa19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 WI2-2373I1.2A0A1W2PRP0 233 aa19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 H2AFB1P0C5Y9 115 aa19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 OR5G3P0C626 314 aa19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 PATE2Q6UY27 113 aa19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 ZNF600Q6ZNG1 722 aa19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 Q8WTZ3 238 aa19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 PFDN5Q99471 154 aa19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 DNAJC4Q9NNZ3 241 aa19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 ELOA3CA0A087WX78 387 aaPredicted RBP19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 CDC34P49427 236 aaPredicted RBP19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 TCTEX1D4Q5JR98 221 aa19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 SLC25A22Q9H936 323 aa19.2■□□□□ 0.66
SHARPIN-201ENST00000359551 TRAV1-1A0A0B4J248 108 aa19.19■□□□□ 0.66
SHARPIN-201ENST00000359551 TRBV12-3P01733 135 aa19.19■□□□□ 0.66
SHARPIN-201ENST00000359551 ARL3P36405 182 aa19.19■□□□□ 0.66
SHARPIN-201ENST00000359551 RHOBP62745 196 aa19.19■□□□□ 0.66
SHARPIN-201ENST00000359551 RAB24Q969Q5 203 aa19.19■□□□□ 0.66
SHARPIN-201ENST00000359551 RNF2Q99496 336 aa19.19■□□□□ 0.66
SHARPIN-201ENST00000359551 SEPSECSQ9HD40 501 aaKnown RBP19.19■□□□□ 0.66
SHARPIN-201ENST00000359551 LINC00862A6NCI5 91 aa19.18■□□□□ 0.66
SHARPIN-201ENST00000359551 PPP5D1E7EU14 171 aa19.18■□□□□ 0.66
SHARPIN-201ENST00000359551 COX7A2P2O60397 106 aa19.18■□□□□ 0.66
SHARPIN-201ENST00000359551 SRSF2Q01130 221 aaKnown RBP19.18■□□□□ 0.66
SHARPIN-201ENST00000359551 RNF125Q96EQ8 232 aa19.18■□□□□ 0.66
SHARPIN-201ENST00000359551 DOK5Q9P104 306 aa19.18■□□□□ 0.66
SHARPIN-201ENST00000359551 A0A1W2PPV4 95 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 CLPSL1A2RUU4 121 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 HYPMO75409 117 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 RELQ04864 619 aaPredicted RBP19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 FAM78BQ5VT40 261 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 C10orf113Q5VZT2 155 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 OR1B1Q8NGR6 318 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 MRPL32Q9BYC8 188 aaKnown RBP19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 GNB4Q9HAV0 340 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 MED9Q9NWA0 146 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 MRPL27Q9P0M9 148 aaKnown RBP19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 PEF1Q9UBV8 284 aaKnown RBP19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 FUT9Q9Y231 359 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 PUS1Q9Y606 427 aaKnown RBP eCLIP19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 TEP1Q99973 2627 aaKnown RBP19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 IL4P05112 153 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 LGALS1P09382 135 aaKnown RBP19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 ORM2P19652 201 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 PROK1P58294 105 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 LYZP61626 148 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 SFT2D1Q8WV19 159 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 HRH4Q9H3N8 390 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 C2CD3Q4AC94 2353 aa19.17■□□□□ 0.66
SHARPIN-201ENST00000359551 MAP1LC3B2A6NCE7 125 aa19.16■□□□□ 0.66
SHARPIN-201ENST00000359551 CDX1P47902 265 aaPredicted RBP19.16■□□□□ 0.66
SHARPIN-201ENST00000359551 WFDC12Q8WWY7 111 aa19.16■□□□□ 0.66
SHARPIN-201ENST00000359551 MAP1LC3BQ9GZQ8 125 aa19.16■□□□□ 0.66
SHARPIN-201ENST00000359551 ZFAND3Q9H8U3 227 aa19.16■□□□□ 0.66
SHARPIN-201ENST00000359551 RNF114Q9Y508 228 aa19.16■□□□□ 0.66
SHARPIN-201ENST00000359551 ANKRD34BA5PLL1 514 aa19.15■□□□□ 0.66
SHARPIN-201ENST00000359551 BMPR1BO00238 502 aa19.15■□□□□ 0.66
SHARPIN-201ENST00000359551 HBE1P02100 147 aa19.15■□□□□ 0.66
SHARPIN-201ENST00000359551 SPATA31B1PQ5VZV4 182 aa19.15■□□□□ 0.66
SHARPIN-201ENST00000359551 LCN15Q6UWW0 184 aa19.15■□□□□ 0.66
SHARPIN-201ENST00000359551 TOMM20LQ6UXN7 152 aa19.15■□□□□ 0.66
SHARPIN-201ENST00000359551 STAG3L2P0CL84 134 aa19.14■□□□□ 0.66
SHARPIN-201ENST00000359551 STAG3L3P0CL85 134 aa19.14■□□□□ 0.66
SHARPIN-201ENST00000359551 USF2Q15853 346 aaPredicted RBP19.14■□□□□ 0.66
SHARPIN-201ENST00000359551 NDUFA5Q16718 116 aa19.14■□□□□ 0.66
SHARPIN-201ENST00000359551 MIR17HGQ75NE6 70 aa19.14■□□□□ 0.66
SHARPIN-201ENST00000359551 HIGD1AQ9Y241 93 aa19.14■□□□□ 0.66
SHARPIN-201ENST00000359551 GGCTO75223 188 aaKnown RBP19.14■□□□□ 0.65
SHARPIN-201ENST00000359551 EIF3GO75821 320 aaKnown RBP eCLIP19.14■□□□□ 0.65
SHARPIN-201ENST00000359551 UHRF2Q96PU4 802 aa19.14■□□□□ 0.65
SHARPIN-201ENST00000359551 OR5B12Q96R08 314 aa19.14■□□□□ 0.65
SHARPIN-201ENST00000359551 PBDC1Q9BVG4 233 aa19.14■□□□□ 0.65
SHARPIN-201ENST00000359551 IGHV3-35A0A0C4DH35 117 aa19.13■□□□□ 0.65
SHARPIN-201ENST00000359551 TEX46H3BTG2 121 aa19.13■□□□□ 0.65
SHARPIN-201ENST00000359551 I3L521 148 aa19.13■□□□□ 0.65
SHARPIN-201ENST00000359551 LINC00305Q7Z4B0 112 aa19.13■□□□□ 0.65
SHARPIN-201ENST00000359551 NDUFA4O00483 81 aa19.12■□□□□ 0.65
SHARPIN-201ENST00000359551 HMGB3O15347 200 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms