RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 DEFB125Q8N687 156 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 GRAMD2BQ96HH9 432 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 TSSC4Q9Y5U2 329 aaPredicted RBP8.19□□□□□ -1.1
RNF40-202ENST00000357890 PCNX2A6NKB5 2137 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 DYSFO75923 2080 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 C9JCJ5 164 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 NKX2-8O15522 239 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 SMIM13P0DJ93 91 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 CT45A10P0DMU9 189 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 TEX45Q8NA69 505 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 OR9G1Q8NH87 305 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 TMUB1Q9BVT8 246 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 CACNA1BQ00975 2339 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 MMP23AO75900 390 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 OR2J3O76001 311 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 CT45A6P0DMU7 189 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 CT45A5P0DMU8 189 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 CT45A7P0DMV0 189 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 HSPE1P61604 102 aaKnown RBP8.19□□□□□ -1.1
RNF40-202ENST00000357890 CT45A1Q5HYN5 189 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 OR4A5Q8NH83 315 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 CT45A3Q8NHU0 189 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 CALYQ9NYX4 217 aa8.19□□□□□ -1.1
RNF40-202ENST00000357890 MLANAQ16655 118 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 MRPL27Q9P0M9 148 aaKnown RBP8.18□□□□□ -1.1
RNF40-202ENST00000357890 PEX7O00628 323 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 SLC25A17O43808 307 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 REG1BP48304 166 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 CACNG7P62955 275 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 MORN2Q502X0 79 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 SRSF12Q8WXF0 261 aaKnown RBP8.18□□□□□ -1.1
RNF40-202ENST00000357890 NEUROG1Q92886 237 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 C5orf30Q96GV9 206 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 COL25A1Q9BXS0 654 aaPredicted RBP8.18□□□□□ -1.1
RNF40-202ENST00000357890 A0A1B0GWB2 263 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 H3BVH4 76 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 SEC11AP67812 179 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 DEFB109BQ30KR1 87 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 SAMD5Q5TGI4 173 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 JPT1Q9UK76 154 aa8.18□□□□□ -1.1
RNF40-202ENST00000357890 PLA2G2CQ5R387 149 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 ZADH2Q8N4Q0 377 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 VSTM2AQ8TAG5 236 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 ITLN1Q8WWA0 313 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 RAB1CQ92928 201 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 COL6A6A6NMZ7 2263 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 LOC400499M0QZD8 3231 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 DCHS1Q96JQ0 3298 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 KIR2DS2P43631 304 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 RAB9AP51151 201 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 PLGLAQ15195 96 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 FDCSPQ8NFU4 85 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 OR10X1Q8NGY0 326 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 LOC107984156A0A0G2JMH3 177 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 PSG3Q16557 428 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 ARL17AQ8IVW1 177 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 CD177Q8N6Q3 437 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 FAM169BQ8N8A8 192 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 C1orf162Q8NEQ5 155 aaPredicted RBP8.17□□□□□ -1.1
RNF40-202ENST00000357890 CCL13Q99616 98 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 ASCL2Q99929 193 aa8.17□□□□□ -1.1
RNF40-202ENST00000357890 A0A1W2PNU3 283 aaPredicted RBP8.16□□□□□ -1.1
RNF40-202ENST00000357890 TNFAIP6P98066 277 aaPredicted RBP8.16□□□□□ -1.1
RNF40-202ENST00000357890 IGHV1-24A0A0C4DH33 117 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 SCGB2A1O75556 95 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 MOSP00540 346 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 REG1AP05451 166 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 LYZP61626 148 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 HSD52Q0P140 79 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 ADAMTSL5Q6ZMM2 481 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 Q6ZR03 302 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 WDR31Q8NA23 367 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 PRR7Q8TB68 274 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 NPIPB3Q92617 1050 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 PRNDQ9UKY0 176 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 YLPM1P49750 1951 aaKnown RBP8.16□□□□□ -1.1
RNF40-202ENST00000357890 TEX48A0A1B0GUV7 120 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 GGTLC3B5MD39 225 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 CDX4O14627 284 aaPredicted RBP8.16□□□□□ -1.1
RNF40-202ENST00000357890 GFRA3O60609 400 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 TGFAP01135 160 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 AREGP15514 252 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 TIMM23BQ5SRD1 257 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 C9orf106Q8NAJ2 232 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 ZNF414Q96IQ9 312 aa8.16□□□□□ -1.1
RNF40-202ENST00000357890 RIGQ13278 110 aa8.15□□□□□ -1.1
RNF40-202ENST00000357890 ETDBQ3ZM63 59 aa8.15□□□□□ -1.1
RNF40-202ENST00000357890 LCNL1Q6ZST4 164 aa8.15□□□□□ -1.1
RNF40-202ENST00000357890 HARBI1Q96MB7 349 aa8.15□□□□□ -1.1
RNF40-202ENST00000357890 PLXNB1O43157 2135 aa8.15□□□□□ -1.1
RNF40-202ENST00000357890 ZGRF1Q86YA3 2104 aa8.15□□□□□ -1.1
RNF40-202ENST00000357890 ABCA4P78363 2273 aa8.15□□□□□ -1.1
RNF40-202ENST00000357890 AHRRA9YTQ3 701 aa8.15□□□□□ -1.1
RNF40-202ENST00000357890 CCL8P80075 99 aa8.15□□□□□ -1.1
RNF40-202ENST00000357890 RBPJQ06330 500 aa8.15□□□□□ -1.1
RNF40-202ENST00000357890 DEFB124Q8NES8 71 aa8.15□□□□□ -1.1
RNF40-202ENST00000357890 RPP21Q9H633 154 aaKnown RBP8.15□□□□□ -1.1
RNF40-202ENST00000357890 RABAC1Q9UI14 185 aa8.15□□□□□ -1.1
RNF40-202ENST00000357890 CHTOPQ9Y3Y2 248 aaKnown RBP8.15□□□□□ -1.1
RNF40-202ENST00000357890 IGLC1P0CG04 106 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms