RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 CEACAM1P13688 526 aa13.29□□□□□ -0.28
RXRA-201ENST00000356384 SEC11AP67812 179 aa13.29□□□□□ -0.28
RXRA-201ENST00000356384 FXYD7P58549 80 aa13.29□□□□□ -0.28
RXRA-201ENST00000356384 LY6G6FQ5SQ64 297 aa13.29□□□□□ -0.28
RXRA-201ENST00000356384 TRAV41A0A0B4J266 112 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 LGALS1P09382 135 aaKnown RBP13.28□□□□□ -0.28
RXRA-201ENST00000356384 CITED2Q99967 270 aaPredicted RBP13.28□□□□□ -0.28
RXRA-201ENST00000356384 PMS2P5A8MQ11 134 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 D6R8Y8 96 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 TIMP3P35625 211 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 TMEM105Q8N8V8 129 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 ESPL1Q14674 2120 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 TDRD15B5MCY1 1934 aaKnown RBP13.28□□□□□ -0.28
RXRA-201ENST00000356384 IGHV3-53P01767 116 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 BTCP35070 178 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 NR2C2APQ86WQ0 139 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 HIST1H2BLQ99880 126 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 OCIAD2Q56VL3 154 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 C10orf55Q5SWW7 151 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 EXOC3-AS1Q8N2X6 119 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 WDR83OSQ9Y284 106 aa13.28□□□□□ -0.28
RXRA-201ENST00000356384 IGHV1-18A0A0C4DH31 117 aa13.27□□□□□ -0.28
RXRA-201ENST00000356384 ZNF474Q6S9Z5 364 aaPredicted RBP13.27□□□□□ -0.28
RXRA-201ENST00000356384 ASCL4Q6XD76 172 aa13.27□□□□□ -0.28
RXRA-201ENST00000356384 MRPS18CQ9Y3D5 142 aaKnown RBP13.27□□□□□ -0.28
RXRA-201ENST00000356384 ID3Q02535 119 aa13.27□□□□□ -0.28
RXRA-201ENST00000356384 ZFAND6Q6FIF0 208 aa13.27□□□□□ -0.28
RXRA-201ENST00000356384 SMPXQ9UHP9 88 aa13.27□□□□□ -0.28
RXRA-201ENST00000356384 OTOFQ9HC10 1997 aa13.27□□□□□ -0.29
RXRA-201ENST00000356384 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.27□□□□□ -0.29
RXRA-201ENST00000356384 MLNRO43193 412 aa13.27□□□□□ -0.29
RXRA-201ENST00000356384 ZNF883P0CG24 379 aa13.27□□□□□ -0.29
RXRA-201ENST00000356384 SPATA31B1PQ5VZV4 182 aa13.27□□□□□ -0.29
RXRA-201ENST00000356384 INS-IGF2F8WCM5 200 aa13.27□□□□□ -0.29
RXRA-201ENST00000356384 INSP01308 110 aa13.27□□□□□ -0.29
RXRA-201ENST00000356384 TMEM219Q86XT9 240 aa13.27□□□□□ -0.29
RXRA-201ENST00000356384 SLC25A28Q96A46 364 aa13.27□□□□□ -0.29
RXRA-201ENST00000356384 PIKFYVEQ9Y2I7 2098 aa13.27□□□□□ -0.29
RXRA-201ENST00000356384 TRGV1A0A0A0MS02 117 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 TRAV8-1A0A0A6YYK1 113 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 ZNF625Q96I27 306 aaPredicted RBP13.26□□□□□ -0.29
RXRA-201ENST00000356384 DICER1Q9UPY3 1922 aaKnown RBP13.26□□□□□ -0.29
RXRA-201ENST00000356384 NDUFS8O00217 210 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 TCRAP04437 139 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 TREML4Q6UXN2 200 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 C1orf122Q6ZSJ8 110 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 BCL6BQ8N143 479 aaPredicted RBP13.26□□□□□ -0.29
RXRA-201ENST00000356384 F8VVB4 439 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 F8VWA3 439 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 C15orf32Q32M92 178 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 LSM4Q9Y4Z0 139 aaKnown RBP13.26□□□□□ -0.29
RXRA-201ENST00000356384 BRCA1P38398 1863 aaKnown RBP13.26□□□□□ -0.29
RXRA-201ENST00000356384 IGKV1D-8A0A087WSZ0 117 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 MRPL14Q6P1L8 145 aaKnown RBP13.26□□□□□ -0.29
RXRA-201ENST00000356384 HEPN1Q6WQI6 88 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 SCRT1Q9BWW7 348 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 SCN8AQ9UQD0 1980 aa13.26□□□□□ -0.29
RXRA-201ENST00000356384 MBNL3Q9NUK0 354 aaKnown RBP13.25□□□□□ -0.29
RXRA-201ENST00000356384 F8WEM9 126 aa13.25□□□□□ -0.29
RXRA-201ENST00000356384 IGHV1-46P01743 117 aa13.25□□□□□ -0.29
RXRA-201ENST00000356384 LYZL1Q6UWQ5 148 aa13.25□□□□□ -0.29
RXRA-201ENST00000356384 TEX43Q6ZNM6 134 aa13.25□□□□□ -0.29
RXRA-201ENST00000356384 A0A0A6YYD4 124 aa13.25□□□□□ -0.29
RXRA-201ENST00000356384 CSRP3P50461 194 aa13.25□□□□□ -0.29
RXRA-201ENST00000356384 EP300Q09472 2414 aaPredicted RBP13.25□□□□□ -0.29
RXRA-201ENST00000356384 RPL36AP83881 106 aaKnown RBP13.25□□□□□ -0.29
RXRA-201ENST00000356384 RPL36ALQ969Q0 106 aaKnown RBP13.25□□□□□ -0.29
RXRA-201ENST00000356384 AKAP6Q13023 2319 aa13.25□□□□□ -0.29
RXRA-201ENST00000356384 UBE2CO00762 179 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 CXCL1P09341 107 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 RPL35AP18077 110 aaKnown RBP13.24□□□□□ -0.29
RXRA-201ENST00000356384 PLEKHB2Q96CS7 222 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 MYO16Q9Y6X6 1858 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 FAM90A9PA6NNJ1 464 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 TNFRSF6BO95407 300 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 SLC25A48Q6ZT89 311 aaKnown RBP13.24□□□□□ -0.29
RXRA-201ENST00000356384 SCN2AQ99250 2005 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 PSG1P11464 419 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 C2orf82Q6UX34 121 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 ZNF319Q9P2F9 582 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 SRRM4A7MD48 611 aaKnown RBP13.24□□□□□ -0.29
RXRA-201ENST00000356384 PSCAO43653 123 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 GUSBP1Q15486 140 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 RASL10AQ92737 203 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 CACNA1IQ9P0X4 2223 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 LINC01549A6NIU2 74 aa13.24□□□□□ -0.29
RXRA-201ENST00000356384 SLC25A39Q9BZJ4 359 aaPredicted RBP13.24□□□□□ -0.29
RXRA-201ENST00000356384 IGHV2-26A0A0B4J1V2 119 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 VWC2LB2RUY7 222 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 TNFSF13O75888 250 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 GGTLC1Q9BX51 225 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 SPRR3Q9UBC9 169 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 ITGB1BP1O14713 200 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 NDPQ00604 133 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 FGFBP3Q8TAT2 258 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 AMBPP02760 352 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 VMO1Q7Z5L0 202 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 HIST3H2BBQ8N257 126 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 FGF16O43320 207 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 KLRD1Q13241 179 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms