RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 DSCAMO60469 2012 aa7.66□□□□□ -1.18
SMG6-202ENST00000354901 PLXNB1O43157 2135 aa7.66□□□□□ -1.18
SMG6-202ENST00000354901 IGHV1-18A0A0C4DH31 117 aa7.66□□□□□ -1.18
SMG6-202ENST00000354901 GAGE12HA6NDE8 117 aa7.66□□□□□ -1.18
SMG6-202ENST00000354901 KLK10O43240 276 aa7.66□□□□□ -1.18
SMG6-202ENST00000354901 CXorf1O96002 111 aa7.66□□□□□ -1.18
SMG6-202ENST00000354901 P0C879 139 aa7.66□□□□□ -1.18
SMG6-202ENST00000354901 ADAMTSL5Q6ZMM2 481 aa7.66□□□□□ -1.18
SMG6-202ENST00000354901 SH2D6Q7Z4S9 175 aa7.66□□□□□ -1.18
SMG6-202ENST00000354901 OR52E5Q8NH55 327 aa7.66□□□□□ -1.18
SMG6-202ENST00000354901 IGKV1D-17A0A075B6S4 117 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 J3KRW8 73 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 FABP2P12104 132 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 NMUP48645 174 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 ZNF134P52741 427 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 DUX4L9Q6RFH8 374 aaPredicted RBP7.65□□□□□ -1.18
SMG6-202ENST00000354901 OR8A1Q8NGG7 326 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 SMG1Q96Q15 3661 aaKnown RBP7.65□□□□□ -1.18
SMG6-202ENST00000354901 ADGRG4Q8IZF6 3080 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 A6NDN8 102 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 PF4V1P10720 104 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 GCSHP23434 173 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 GATA3P23771 443 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 DUTP33316 252 aaKnown RBP7.65□□□□□ -1.18
SMG6-202ENST00000354901 TCF15Q12870 199 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 EIF4EBP1Q13541 118 aaPredicted RBP7.65□□□□□ -1.18
SMG6-202ENST00000354901 CCDC144NLQ6NUI1 221 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 RPRMLQ8N4K4 120 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 Q8TCH9 128 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 NEU4Q8WWR8 484 aaPredicted RBP7.65□□□□□ -1.18
SMG6-202ENST00000354901 ZNF479Q96JC4 524 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 OR2V2Q96R30 315 aa7.65□□□□□ -1.18
SMG6-202ENST00000354901 HSD17B10Q99714 261 aaKnown RBP7.65□□□□□ -1.18
SMG6-202ENST00000354901 K7ERJ3 54 aa7.65□□□□□ -1.19
SMG6-202ENST00000354901 FXYD7P58549 80 aa7.65□□□□□ -1.19
SMG6-202ENST00000354901 ERVK-16P61578 105 aa7.65□□□□□ -1.19
SMG6-202ENST00000354901 TBR1Q16650 682 aa7.65□□□□□ -1.19
SMG6-202ENST00000354901 A0A1W2PRE2 83 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 C9orf118A6NHY6 69 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 C15orf65H3BRN8 121 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 PSG3Q16557 428 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 ETDBQ3ZM63 59 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 TCF24Q7RTU0 167 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 CACNG8Q8WXS5 425 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 MAP1LC3CQ9BXW4 147 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 MS4A5Q9H3V2 200 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 PROCRQ9UNN8 238 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 SAA2-SAA4A0A096LPE2 208 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 ANXA2RQ3ZCQ2 193 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 MIR17HGQ75NE6 70 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 GCSAMQ8N6F7 178 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 PRSS33Q8NF86 280 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 S1PR3Q99500 378 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 ZNRD1Q9P1U0 126 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 B5MCH6 92 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 PPIFP30405 207 aaKnown RBP7.64□□□□□ -1.19
SMG6-202ENST00000354901 RTL8BQ17RB0 113 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 GDF5OSQ5U4N7 250 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 C1orf229Q6ZS94 237 aaPredicted RBP7.64□□□□□ -1.19
SMG6-202ENST00000354901 ITLN1Q8WWA0 313 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 TMEM140Q9NV12 185 aa7.64□□□□□ -1.19
SMG6-202ENST00000354901 APC2O95996 2303 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 F2RL2O00254 374 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 HLA-DRB1P01911 266 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 TREML4Q6UXN2 200 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 WFDC3Q8IUB2 231 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 VSTM2AQ8TAG5 236 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 ARPC1AQ92747 370 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 RABAC1Q9UI14 185 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 WDR83OSQ9Y284 106 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 TRAV17A0A0B4J275 112 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 IGHV1-24A0A0C4DH33 117 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 GUSBP1Q15486 140 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 SNRNP40Q96DI7 357 aaKnown RBP7.63□□□□□ -1.19
SMG6-202ENST00000354901 SCRT2Q9NQ03 307 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 HSPB8Q9UJY1 196 aa7.63□□□□□ -1.19
SMG6-202ENST00000354901 IGHG3P01860 377 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 OR5AL1P0C617 328 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 FCGR2BP31994 310 aaPredicted RBP7.62□□□□□ -1.19
SMG6-202ENST00000354901 WFDC2Q14508 124 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 UFSP1Q6NVU6 142 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 PRR7Q8TB68 274 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 TPPP3Q9BW30 176 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 TCF19Q9Y242 345 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 TRAV9-1A0A075B6T8 112 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 HIGD1CA8MV81 97 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 AMTNQ6UX39 209 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 MGST2Q99735 147 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 ZNF71Q9NQZ8 489 aaPredicted RBP7.62□□□□□ -1.19
SMG6-202ENST00000354901 CALYQ9NYX4 217 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 ANKRD11Q6UB99 2663 aaPredicted RBP7.62□□□□□ -1.19
SMG6-202ENST00000354901 SRRM5B3KS81 715 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 LCNL1Q6ZST4 164 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 NEGR1Q7Z3B1 354 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 MOB3BQ86TA1 216 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 Q8N7P7 452 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 NAV3Q8IVL0 2385 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 ABCA4P78363 2273 aa7.62□□□□□ -1.19
SMG6-202ENST00000354901 KBTBD11-OT1A0A1B0GTJ5 212 aa7.61□□□□□ -1.19
SMG6-202ENST00000354901 IZUMO1RA6ND01 250 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms