RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 KLHDC1Q8N7A1 406 aa19.66■□□□□ 0.74
CPNE1-202ENST00000352393 BLNKQ8WV28 456 aa19.66■□□□□ 0.74
CPNE1-202ENST00000352393 GPR82Q96P67 336 aa19.66■□□□□ 0.74
CPNE1-202ENST00000352393 TXN2Q99757 166 aa19.66■□□□□ 0.74
CPNE1-202ENST00000352393 PGPA6NDG6 321 aa19.66■□□□□ 0.74
CPNE1-202ENST00000352393 TFPI2P48307 235 aa19.66■□□□□ 0.74
CPNE1-202ENST00000352393 HNRNPA3P51991 378 aaKnown RBP19.66■□□□□ 0.74
CPNE1-202ENST00000352393 BSPH1Q075Z2 132 aa19.66■□□□□ 0.74
CPNE1-202ENST00000352393 OR8B3Q8NGG8 313 aa19.66■□□□□ 0.74
CPNE1-202ENST00000352393 OR8B2Q96RD0 313 aa19.66■□□□□ 0.74
CPNE1-202ENST00000352393 C16orf97H3BN30 126 aa19.65■□□□□ 0.74
CPNE1-202ENST00000352393 LINC00614P0C842 121 aa19.65■□□□□ 0.74
CPNE1-202ENST00000352393 GP9P14770 177 aa19.65■□□□□ 0.74
CPNE1-202ENST00000352393 LGALS7P47929 136 aa19.65■□□□□ 0.74
CPNE1-202ENST00000352393 CAMPP49913 170 aa19.65■□□□□ 0.74
CPNE1-202ENST00000352393 TMEM155Q4W5P6 130 aa19.65■□□□□ 0.74
CPNE1-202ENST00000352393 EBLN2Q6P2I7 272 aa19.65■□□□□ 0.74
CPNE1-202ENST00000352393 RPP21Q9H633 154 aaKnown RBP19.65■□□□□ 0.74
CPNE1-202ENST00000352393 M0R2Z0 102 aa19.64■□□□□ 0.74
CPNE1-202ENST00000352393 THBDP07204 575 aa19.64■□□□□ 0.74
CPNE1-202ENST00000352393 ATOH7Q8N100 152 aa19.64■□□□□ 0.74
CPNE1-202ENST00000352393 CCL17Q92583 94 aa19.64■□□□□ 0.74
CPNE1-202ENST00000352393 SGK494Q96LW2 274 aa19.64■□□□□ 0.74
CPNE1-202ENST00000352393 PRSS22Q9GZN4 317 aa19.64■□□□□ 0.74
CPNE1-202ENST00000352393 PLXNB1O43157 2135 aa19.64■□□□□ 0.73
CPNE1-202ENST00000352393 A0A0G2JNJ9 132 aa19.64■□□□□ 0.73
CPNE1-202ENST00000352393 TOMM40O96008 361 aa19.64■□□□□ 0.73
CPNE1-202ENST00000352393 NBEAP1P0C6P0 100 aa19.64■□□□□ 0.73
CPNE1-202ENST00000352393 CT83Q5H943 113 aa19.64■□□□□ 0.73
CPNE1-202ENST00000352393 HCP5Q6MZN7 132 aa19.64■□□□□ 0.73
CPNE1-202ENST00000352393 RNASEKQ6P5S7 137 aaKnown RBP19.64■□□□□ 0.73
CPNE1-202ENST00000352393 C5orf17Q8NAS9 161 aa19.64■□□□□ 0.73
CPNE1-202ENST00000352393 Q9UFV3 132 aa19.64■□□□□ 0.73
CPNE1-202ENST00000352393 BOD1L1Q8NFC6 3051 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 MAJINQ3KP22 176 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 LINC00322Q6ZN03 302 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-202ENST00000352393 TMEM116Q8NCL8 245 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 FMC1Q96HJ9 113 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 ZNF492Q9P255 531 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 ZFP30Q9Y2G7 519 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 LAMTOR2Q9Y2Q5 125 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 LTAP01374 205 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 HBBP68871 147 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 CYB5R2Q6BCY4 276 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 TCF24Q7RTU0 167 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 ASCL5Q7RTU5 278 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 STPG4Q8N801 248 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 TEX45Q8NA69 505 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 C22orf15Q8WYQ4 148 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 URB1-AS1Q96HZ7 61 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 RPH3ALQ9UNE2 315 aa19.63■□□□□ 0.73
CPNE1-202ENST00000352393 C19orf71A6NCJ1 209 aa19.62■□□□□ 0.73
CPNE1-202ENST00000352393 C2orf70A6NJV1 201 aa19.62■□□□□ 0.73
CPNE1-202ENST00000352393 IGHV1-8P0DP01 117 aa19.62■□□□□ 0.73
CPNE1-202ENST00000352393 LHFPL4Q7Z7J7 247 aa19.62■□□□□ 0.73
CPNE1-202ENST00000352393 KAAG1Q9UBP8 84 aa19.62■□□□□ 0.73
CPNE1-202ENST00000352393 BTF3P20290 206 aaKnown RBP19.61■□□□□ 0.73
CPNE1-202ENST00000352393 RPL27AP46776 148 aaKnown RBP19.61■□□□□ 0.73
CPNE1-202ENST00000352393 PAX2Q02962 417 aa19.61■□□□□ 0.73
CPNE1-202ENST00000352393 IGHV3-72A0A0B4J1Y9 119 aa19.61■□□□□ 0.73
CPNE1-202ENST00000352393 CRYGBP07316 175 aa19.61■□□□□ 0.73
CPNE1-202ENST00000352393 PLP1P60201 277 aa19.61■□□□□ 0.73
CPNE1-202ENST00000352393 SOX21Q9Y651 276 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-202ENST00000352393 TRAV9-2A0A087WT02 112 aa19.6■□□□□ 0.73
CPNE1-202ENST00000352393 ENSAO43768 121 aaKnown RBP19.6■□□□□ 0.73
CPNE1-202ENST00000352393 C11orf42Q8N5U0 333 aa19.6■□□□□ 0.73
CPNE1-202ENST00000352393 OR2D3Q8NGH3 330 aa19.6■□□□□ 0.73
CPNE1-202ENST00000352393 GTSF1Q8WW33 167 aa19.6■□□□□ 0.73
CPNE1-202ENST00000352393 RP1L1Q8IWN7 2480 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-202ENST00000352393 A8MWL6 223 aa19.6■□□□□ 0.73
CPNE1-202ENST00000352393 TCRAP04437 139 aa19.6■□□□□ 0.73
CPNE1-202ENST00000352393 TSPOP30536 169 aa19.6■□□□□ 0.73
CPNE1-202ENST00000352393 Q9H3A6 140 aa19.6■□□□□ 0.73
CPNE1-202ENST00000352393 C20orf202A1L168 122 aa19.59■□□□□ 0.73
CPNE1-202ENST00000352393 NDUFB8O95169 186 aa19.59■□□□□ 0.73
CPNE1-202ENST00000352393 FAM87AP0C7U9 286 aa19.59■□□□□ 0.73
CPNE1-202ENST00000352393 Q56UQ5 140 aa19.59■□□□□ 0.73
CPNE1-202ENST00000352393 FAM120AOSQ5T036 256 aa19.59■□□□□ 0.73
CPNE1-202ENST00000352393 SSX8Q7RTT4 187 aa19.59■□□□□ 0.73
CPNE1-202ENST00000352393 TMEM133Q9H2Q1 129 aa19.59■□□□□ 0.73
CPNE1-202ENST00000352393 MRPS16Q9Y3D3 137 aaKnown RBP19.59■□□□□ 0.73
CPNE1-202ENST00000352393 EP300Q09472 2414 aaPredicted RBP19.58■□□□□ 0.73
CPNE1-202ENST00000352393 P01737 135 aa19.58■□□□□ 0.72
CPNE1-202ENST00000352393 CNTFRP26992 372 aa19.58■□□□□ 0.72
CPNE1-202ENST00000352393 KIR3DL3Q8N743 410 aa19.58■□□□□ 0.72
CPNE1-202ENST00000352393 C8orf46Q8TAG6 207 aa19.58■□□□□ 0.72
CPNE1-202ENST00000352393 GFRA4Q9GZZ7 299 aa19.58■□□□□ 0.72
CPNE1-202ENST00000352393 FAM162BQ5T6X4 162 aa19.57■□□□□ 0.72
CPNE1-202ENST00000352393 SPATA12Q7Z6I5 190 aa19.57■□□□□ 0.72
CPNE1-202ENST00000352393 RNASE6Q93091 150 aaKnown RBP19.57■□□□□ 0.72
CPNE1-202ENST00000352393 ZNF318Q5VUA4 2279 aa19.57■□□□□ 0.72
CPNE1-202ENST00000352393 IGHV2-26A0A0B4J1V2 119 aa19.57■□□□□ 0.72
CPNE1-202ENST00000352393 PRR31Q5SQ13 230 aa19.57■□□□□ 0.72
CPNE1-202ENST00000352393 LEMD1Q68G75 181 aa19.57■□□□□ 0.72
CPNE1-202ENST00000352393 RBM14Q96PK6 669 aaKnown RBP19.57■□□□□ 0.72
CPNE1-202ENST00000352393 CNOT1A5YKK6 2376 aaKnown RBP19.56■□□□□ 0.72
CPNE1-202ENST00000352393 IGHV3-21A0A0B4J1V1 117 aa19.56■□□□□ 0.72
CPNE1-202ENST00000352393 H3BTX0 84 aa19.56■□□□□ 0.72
CPNE1-202ENST00000352393 APELAP0DMC3 54 aa19.56■□□□□ 0.72
CPNE1-202ENST00000352393 SIGLEC9Q9Y336 463 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms