RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 MOB4Q9Y3A3 225 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 TMEM78Q5T7P6 136 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 SEM1Q6ZVN7 128 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 BPTFQ12830 3046 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 A0A087WWC5 75 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 C17orf58Q2M2W7 97 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 TMEM95Q3KNT9 176 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 DYNLRB2Q8TF09 96 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 ST6GALNAC6Q969X2 333 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 TRGV3P03979 118 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 OR10J6PQ8NGY7 276 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 TRAV9-1A0A075B6T8 112 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 C7orf71A4D174 169 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 CRXO43186 299 aaPredicted RBP9.94□□□□□ -0.82
SMAD9-201ENST00000350148 TGFAP01135 160 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 LY6EQ16553 131 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 C1orf122Q6ZSJ8 110 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 MRAP2Q96G30 205 aa9.94□□□□□ -0.82
SMAD9-201ENST00000350148 SPINK8P0C7L1 97 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 MFAP2P55001 183 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 NPFFR1Q9GZQ6 430 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 TRBV9A0A0B4J1U6 114 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 TMEM238C9JI98 176 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 DMRTC2Q8IXT2 367 aaPredicted RBP9.93□□□□□ -0.82
SMAD9-201ENST00000350148 SRIP30626 198 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 PLAUP00749 431 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 GPR183P32249 361 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 IBA57Q5T440 356 aaKnown RBP9.93□□□□□ -0.82
SMAD9-201ENST00000350148 C16orf92Q96LL3 132 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 CST9LQ9H4G1 147 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 A0A1W2PRE2 83 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 HIST1H2BKO60814 126 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 HIST1H2BJP06899 126 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 NBEAP1P0C6P0 100 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 PSG1P11464 419 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 HIST1H2BOP23527 126 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 LOXP28300 417 aaPredicted RBP9.93□□□□□ -0.82
SMAD9-201ENST00000350148 HIST1H2BBP33778 126 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 HIST1H2BDP58876 126 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 HIST1H2BCP62807 126 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 HIST2H2BEQ16778 126 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.93□□□□□ -0.82
SMAD9-201ENST00000350148 HIST1H2BHQ93079 126 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 JMJD8Q96S16 334 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 HIST1H2BNQ99877 126 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 HIST1H2BMQ99879 126 aa9.93□□□□□ -0.82
SMAD9-201ENST00000350148 EREGO14944 169 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 NPSP0C0P6 89 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 POU2AF1Q16633 256 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 TRGV9Q99603 122 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 PRSS22Q9GZN4 317 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 PRDM13Q9H4Q3 707 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 KLF2Q9Y5W3 355 aaPredicted RBP9.92□□□□□ -0.82
SMAD9-201ENST00000350148 GAGE12BA1L429 117 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 SH2D7A6NKC9 451 aaPredicted RBP9.92□□□□□ -0.82
SMAD9-201ENST00000350148 UBE2E1P51965 193 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 PRNTQ86SH4 94 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 NPFFO15130 113 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 ZNF137PP52743 207 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 CCL20P78556 96 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 C5orf64Q2M2E5 130 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 C1orf194Q5T5A4 169 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 EBLN2Q6P2I7 272 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 TREML4Q6UXN2 200 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 ZNF502Q8TBZ5 544 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 HIST1H2BLQ99880 126 aa9.92□□□□□ -0.82
SMAD9-201ENST00000350148 OR5AN1Q8NGI8 311 aa9.91□□□□□ -0.82
SMAD9-201ENST00000350148 FGF23Q9GZV9 251 aaPredicted RBP9.91□□□□□ -0.82
SMAD9-201ENST00000350148 SIGLEC9Q9Y336 463 aa9.91□□□□□ -0.82
SMAD9-201ENST00000350148 AMY1AP04745 511 aa9.91□□□□□ -0.82
SMAD9-201ENST00000350148 MST1LQ2TV78 715 aa9.91□□□□□ -0.82
SMAD9-201ENST00000350148 Q8NA96 180 aa9.91□□□□□ -0.82
SMAD9-201ENST00000350148 FMC1Q96HJ9 113 aa9.91□□□□□ -0.82
SMAD9-201ENST00000350148 OTORQ9NRC9 128 aa9.91□□□□□ -0.82
SMAD9-201ENST00000350148 CRYBB3P26998 211 aa9.91□□□□□ -0.82
SMAD9-201ENST00000350148 LINC01356Q8N9X3 169 aa9.91□□□□□ -0.82
SMAD9-201ENST00000350148 TMEM189A5PLL7 270 aa9.9□□□□□ -0.82
SMAD9-201ENST00000350148 SNAI2O43623 268 aa9.9□□□□□ -0.82
SMAD9-201ENST00000350148 DAZAP2Q15038 168 aaPredicted RBP9.9□□□□□ -0.82
SMAD9-201ENST00000350148 HIST3H2BBQ8N257 126 aa9.9□□□□□ -0.82
SMAD9-201ENST00000350148 HOXA4Q00056 320 aaPredicted RBP9.9□□□□□ -0.82
SMAD9-201ENST00000350148 GAGE1Q13065 139 aa9.9□□□□□ -0.82
SMAD9-201ENST00000350148 TTC9CQ8N5M4 171 aa9.9□□□□□ -0.82
SMAD9-201ENST00000350148 ORM1P02763 201 aa9.9□□□□□ -0.82
SMAD9-201ENST00000350148 GGTLC1Q9BX51 225 aa9.9□□□□□ -0.82
SMAD9-201ENST00000350148 TMEM14BQ9NUH8 114 aa9.9□□□□□ -0.82
SMAD9-201ENST00000350148 CD5P06127 495 aa9.9□□□□□ -0.83
SMAD9-201ENST00000350148 CENPVQ7Z7K6 275 aaPredicted RBP9.9□□□□□ -0.83
SMAD9-201ENST00000350148 TRAV8-4A0A0B4J246 113 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 SLC50A1Q9BRV3 221 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 LIME1Q9H400 295 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 PRORYQ9H606 182 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 IGHV2-70DA0A0C4DH43 119 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 J3QLI3 93 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 ICAM4Q14773 271 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 IGHV3OR16-10A0A075B7F0 116 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.89□□□□□ -0.83
SMAD9-201ENST00000350148 LOC389332A0A1B0GUA5 103 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 C15orf62A8K5M9 175 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 TSPOP30536 169 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms