RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TCF24Q7RTU0 167 aa14.51□□□□□ -0.09
PTP4A3-202ENST00000349124 PDPNQ86YL7 162 aa14.51□□□□□ -0.09
PTP4A3-202ENST00000349124 RNF2Q99496 336 aa14.51□□□□□ -0.09
PTP4A3-202ENST00000349124 CUL9Q8IWT3 2517 aa14.51□□□□□ -0.09
PTP4A3-202ENST00000349124 SLC25A5P05141 298 aaKnown RBP14.51□□□□□ -0.09
PTP4A3-202ENST00000349124 RPL19P84098 196 aaKnown RBP14.51□□□□□ -0.09
PTP4A3-202ENST00000349124 SPATA45Q537H7 98 aa14.51□□□□□ -0.09
PTP4A3-202ENST00000349124 C11orf42Q8N5U0 333 aa14.51□□□□□ -0.09
PTP4A3-202ENST00000349124 PRSS33Q8NF86 280 aa14.51□□□□□ -0.09
PTP4A3-202ENST00000349124 ABCA4P78363 2273 aa14.51□□□□□ -0.09
PTP4A3-202ENST00000349124 LYNX1G3V0Z9 82 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 TNFRSF13BO14836 293 aaPredicted RBP14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 CRYABP02511 175 aaKnown RBP14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 LYNX1P0DP58 116 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 MMDQ15546 238 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 OR1L4Q8NGR5 311 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 TMEM186Q96B77 213 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 SSUH2Q9Y2M2 353 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 IGLC7A0M8Q6 106 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 CTRLP40313 264 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 LRRC10Q5BKY1 277 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 VSTM2AQ8TAG5 236 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 TMEM208Q9BTX3 173 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 CLEC7AQ9BXN2 247 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 EPDR1Q9UM22 224 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 ZNF318Q5VUA4 2279 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 MYCNOSP40205 109 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 SUB1P53999 127 aaKnown RBP eCLIP14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 DLX6P56179 175 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 THAP8Q8NA92 274 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 C7orf69Q9H7B7 122 aa14.5□□□□□ -0.09
PTP4A3-202ENST00000349124 NBASA2RRP1 2371 aa14.49□□□□□ -0.09
PTP4A3-202ENST00000349124 INS-IGF2F8WCM5 200 aa14.49□□□□□ -0.09
PTP4A3-202ENST00000349124 M0QZ24 198 aa14.49□□□□□ -0.09
PTP4A3-202ENST00000349124 TOX4O94842 621 aa14.49□□□□□ -0.09
PTP4A3-202ENST00000349124 RPLP1P05386 114 aaKnown RBP14.49□□□□□ -0.09
PTP4A3-202ENST00000349124 PRRX1P54821 245 aa14.49□□□□□ -0.09
PTP4A3-202ENST00000349124 IGFBPL1Q8WX77 278 aa14.49□□□□□ -0.09
PTP4A3-202ENST00000349124 GRAMD2BQ96HH9 432 aa14.49□□□□□ -0.09
PTP4A3-202ENST00000349124 CEP295Q9C0D2 2601 aa14.49□□□□□ -0.09
PTP4A3-202ENST00000349124 NPSP0C0P6 89 aa14.49□□□□□ -0.09
PTP4A3-202ENST00000349124 BPIFB3P59826 476 aa14.49□□□□□ -0.09
PTP4A3-202ENST00000349124 KIR3DL3Q8N743 410 aa14.49□□□□□ -0.09
PTP4A3-202ENST00000349124 IGHV1-8P0DP01 117 aa14.48□□□□□ -0.09
PTP4A3-202ENST00000349124 OR2D3Q8NGH3 330 aa14.48□□□□□ -0.09
PTP4A3-202ENST00000349124 RNASE6Q93091 150 aaKnown RBP14.48□□□□□ -0.09
PTP4A3-202ENST00000349124 SH2D7A6NKC9 451 aaPredicted RBP14.48□□□□□ -0.09
PTP4A3-202ENST00000349124 NBEAP1P0C6P0 100 aa14.48□□□□□ -0.09
PTP4A3-202ENST00000349124 UBE2G1P62253 170 aa14.48□□□□□ -0.09
PTP4A3-202ENST00000349124 VMA21Q3ZAQ7 101 aa14.48□□□□□ -0.09
PTP4A3-202ENST00000349124 ASCL2Q99929 193 aa14.48□□□□□ -0.09
PTP4A3-202ENST00000349124 TLN1Q9Y490 2541 aaKnown RBP14.47□□□□□ -0.09
PTP4A3-202ENST00000349124 PMCHL1Q16048 86 aa14.47□□□□□ -0.09
PTP4A3-202ENST00000349124 OR4A5Q8NH83 315 aa14.47□□□□□ -0.09
PTP4A3-202ENST00000349124 ABHD17AQ96GS6 310 aa14.47□□□□□ -0.09
PTP4A3-202ENST00000349124 LPAR2Q9HBW0 351 aa14.47□□□□□ -0.09
PTP4A3-202ENST00000349124 TRAV8-1A0A0A6YYK1 113 aa14.47□□□□□ -0.09
PTP4A3-202ENST00000349124 FOXA3P55318 350 aaPredicted RBP14.47□□□□□ -0.09
PTP4A3-202ENST00000349124 COX19Q49B96 90 aa14.47□□□□□ -0.09
PTP4A3-202ENST00000349124 EBLN2Q6P2I7 272 aa14.47□□□□□ -0.09
PTP4A3-202ENST00000349124 FAM231DQ6ZW35 169 aa14.47□□□□□ -0.09
PTP4A3-202ENST00000349124 OR4B1Q8NGF8 309 aa14.47□□□□□ -0.09
PTP4A3-202ENST00000349124 ASH1LQ9NR48 2969 aaKnown RBP14.46□□□□□ -0.09
PTP4A3-202ENST00000349124 PRRG2O14669 202 aa14.46□□□□□ -0.09
PTP4A3-202ENST00000349124 HYPMO75409 117 aa14.46□□□□□ -0.09
PTP4A3-202ENST00000349124 TMEM155Q4W5P6 130 aa14.46□□□□□ -0.09
PTP4A3-202ENST00000349124 RNASEKQ6P5S7 137 aaKnown RBP14.46□□□□□ -0.09
PTP4A3-202ENST00000349124 ALKBH7Q9BT30 221 aaPredicted RBP14.46□□□□□ -0.09
PTP4A3-202ENST00000349124 SPTA1P02549 2419 aa14.46□□□□□ -0.09
PTP4A3-202ENST00000349124 E7EQL1 145 aa14.46□□□□□ -0.09
PTP4A3-202ENST00000349124 M0QZK8 103 aa14.46□□□□□ -0.09
PTP4A3-202ENST00000349124 IGF2-ASQ6U949 168 aa14.46□□□□□ -0.09
PTP4A3-202ENST00000349124 LINC00311Q8N616 119 aa14.46□□□□□ -0.09
PTP4A3-202ENST00000349124 PRR30Q53SZ7 412 aaPredicted RBP14.45□□□□□ -0.1
PTP4A3-202ENST00000349124 GTSF1Q8WW33 167 aa14.45□□□□□ -0.1
PTP4A3-202ENST00000349124 BORCS7Q96B45 105 aa14.45□□□□□ -0.1
PTP4A3-202ENST00000349124 DYNLRB1Q9NP97 96 aa14.45□□□□□ -0.1
PTP4A3-202ENST00000349124 HSBP1O75506 76 aa14.45□□□□□ -0.1
PTP4A3-202ENST00000349124 CRYGCP07315 174 aa14.45□□□□□ -0.1
PTP4A3-202ENST00000349124 IGLC2P0DOY2 106 aa14.45□□□□□ -0.1
PTP4A3-202ENST00000349124 IGLC3P0DOY3 106 aa14.45□□□□□ -0.1
PTP4A3-202ENST00000349124 SPATA12Q7Z6I5 190 aa14.45□□□□□ -0.1
PTP4A3-202ENST00000349124 ZNF596Q8TC21 504 aa14.45□□□□□ -0.1
PTP4A3-202ENST00000349124 PERPQ96FX8 193 aa14.45□□□□□ -0.1
PTP4A3-202ENST00000349124 ZNF835Q9Y2P0 537 aa14.45□□□□□ -0.1
PTP4A3-202ENST00000349124 RPL27AP46776 148 aaKnown RBP14.44□□□□□ -0.1
PTP4A3-202ENST00000349124 Q56UQ5 140 aa14.44□□□□□ -0.1
PTP4A3-202ENST00000349124 WIPF2Q8TF74 440 aaPredicted RBP14.44□□□□□ -0.1
PTP4A3-202ENST00000349124 URB1-AS1Q96HZ7 61 aa14.44□□□□□ -0.1
PTP4A3-202ENST00000349124 PGLYRP4Q96LB8 373 aa14.44□□□□□ -0.1
PTP4A3-202ENST00000349124 ZNF137PP52743 207 aa14.44□□□□□ -0.1
PTP4A3-202ENST00000349124 Q6ZN92 141 aa14.44□□□□□ -0.1
PTP4A3-202ENST00000349124 GPR82Q96P67 336 aa14.44□□□□□ -0.1
PTP4A3-202ENST00000349124 TMEM133Q9H2Q1 129 aa14.44□□□□□ -0.1
PTP4A3-202ENST00000349124 CLEC5AQ9NY25 188 aa14.44□□□□□ -0.1
PTP4A3-202ENST00000349124 DLEU1O43261 78 aa14.43□□□□□ -0.1
PTP4A3-202ENST00000349124 HIST1H1EP10412 219 aaKnown RBP14.43□□□□□ -0.1
PTP4A3-202ENST00000349124 STPG4Q8N801 248 aa14.43□□□□□ -0.1
PTP4A3-202ENST00000349124 TXN2Q99757 166 aa14.43□□□□□ -0.1
PTP4A3-202ENST00000349124 MLST8Q9BVC4 326 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms