RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 OR1L6Q8NGR2 347 aa11.18□□□□□ -0.62
TRIM4-201ENST00000349062 OR5B3Q8NH48 314 aa11.18□□□□□ -0.62
TRIM4-201ENST00000349062 NAT8BQ9UHF3 227 aa11.18□□□□□ -0.62
TRIM4-201ENST00000349062 PRSS46E5RG02 174 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 FXYD3Q14802 87 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 RNF151Q2KHN1 245 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 HLA-DRB5Q30154 266 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 DNAJC4Q9NNZ3 241 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 BET1LQ9NYM9 111 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 PAX1P15863 534 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 RANP62826 216 aaKnown RBP11.17□□□□□ -0.62
TRIM4-201ENST00000349062 UBE2L3P68036 154 aaKnown RBP11.17□□□□□ -0.62
TRIM4-201ENST00000349062 VWC2Q2TAL6 325 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 OR8I2Q8N0Y5 310 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 FAM19A2Q8N3H0 131 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 MPDU1O75352 247 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 MT-CO2P00403 227 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 GPR6P46095 362 aaPredicted RBP11.17□□□□□ -0.62
TRIM4-201ENST00000349062 CD69Q07108 199 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 LDLRAD2Q5SZI1 272 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 NDUFA4L2Q9NRX3 87 aa11.17□□□□□ -0.62
TRIM4-201ENST00000349062 TIMM8BQ9Y5J9 83 aaPredicted RBP11.17□□□□□ -0.62
TRIM4-201ENST00000349062 LOC105371242A0A075B767 164 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 BUB1B-PAK6H3BSN5 160 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 MRPL54Q6P161 138 aaKnown RBP11.16□□□□□ -0.62
TRIM4-201ENST00000349062 Q6ZN92 141 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 PDPNQ86YL7 162 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 VSTM2AQ8TAG5 236 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 ASCL2Q99929 193 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 MIEN1Q9BRT3 115 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 DIRC3C9JPN6 131 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 ITGB1BP1O14713 200 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 LIPFP07098 398 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 STAG3L2P0CL84 134 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 STAG3L3P0CL85 134 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 PDLIM4P50479 330 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 TRBV20OR9-2A0A075B6H5 130 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 FAM90A9PA6NNJ1 464 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 BRS3P32247 399 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 ZNF841Q6ZN19 808 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 TMEM144Q7Z5S9 345 aa11.16□□□□□ -0.62
TRIM4-201ENST00000349062 CENPVQ7Z7K6 275 aaPredicted RBP11.16□□□□□ -0.62
TRIM4-201ENST00000349062 SSBP3Q9BWW4 388 aaPredicted RBP11.16□□□□□ -0.62
TRIM4-201ENST00000349062 LSM4Q9Y4Z0 139 aaKnown RBP11.16□□□□□ -0.62
TRIM4-201ENST00000349062 CGB1A6NKQ9 187 aa11.15□□□□□ -0.62
TRIM4-201ENST00000349062 PRB1P04280 392 aa11.15□□□□□ -0.62
TRIM4-201ENST00000349062 HINT1P49773 126 aaPredicted RBP11.15□□□□□ -0.62
TRIM4-201ENST00000349062 DLX6P56179 175 aa11.15□□□□□ -0.62
TRIM4-201ENST00000349062 RPL15P61313 204 aaKnown RBP11.15□□□□□ -0.62
TRIM4-201ENST00000349062 LYZP61626 148 aa11.15□□□□□ -0.62
TRIM4-201ENST00000349062 TMEM177Q53S58 311 aa11.15□□□□□ -0.62
TRIM4-201ENST00000349062 NAV2Q8IVL1 2488 aa11.15□□□□□ -0.62
TRIM4-201ENST00000349062 PTTG1IPP53801 180 aa11.15□□□□□ -0.62
TRIM4-201ENST00000349062 SUB1P53999 127 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRIM4-201ENST00000349062 ST6GALNAC6Q969X2 333 aa11.15□□□□□ -0.62
TRIM4-201ENST00000349062 ZNF355PQ9NSJ1 428 aa11.15□□□□□ -0.62
TRIM4-201ENST00000349062 SLC45A2Q9UMX9 530 aa11.15□□□□□ -0.62
TRIM4-201ENST00000349062 NOTCH2Q04721 2471 aa11.15□□□□□ -0.62
TRIM4-201ENST00000349062 ZANQ9Y493 2812 aa11.15□□□□□ -0.63
TRIM4-201ENST00000349062 M0QZK8 103 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 IGLV2-23P01705 113 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 HTR1DP28221 377 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 FBLN7Q53RD9 439 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 PQLC2Q6ZP29 291 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 PARD6GQ9BYG4 376 aaPredicted RBP11.14□□□□□ -0.63
TRIM4-201ENST00000349062 TNFRSF19Q9NS68 423 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 ZNF253O75346 499 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 VENTXO95231 258 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 MC5RP33032 325 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 GNG5P63218 68 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 SPATA45Q537H7 98 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 PPP1R27Q86WC6 154 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 NCOR1P1Q9H4R4 102 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 ZNF257Q9Y2Q1 563 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 PDE6DO43924 150 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 TMEM167AQ8TBQ9 72 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 ZNF586Q9NXT0 402 aa11.14□□□□□ -0.63
TRIM4-201ENST00000349062 A0A1W2PN81 502 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 TNFRSF13BO14836 293 aaPredicted RBP11.13□□□□□ -0.63
TRIM4-201ENST00000349062 CA1P00915 261 aaPredicted RBP11.13□□□□□ -0.63
TRIM4-201ENST00000349062 C10orf113Q5VZT2 155 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 KAAG1Q9UBP8 84 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 USP24Q9UPU5 2620 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 DOPEY1Q5JWR5 2465 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 KIR2DL5BA0A0G2JN68 375 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 KIR2DL5BA0A0G2JPC4 375 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 HNRNPA3P51991 378 aaKnown RBP11.13□□□□□ -0.63
TRIM4-201ENST00000349062 KIR2DL5AQ8N109 375 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 SRSF12Q8WXF0 261 aaKnown RBP11.13□□□□□ -0.63
TRIM4-201ENST00000349062 RNASE7Q9H1E1 156 aaKnown RBP11.13□□□□□ -0.63
TRIM4-201ENST00000349062 LINC00574Q9H8X3 128 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 KCNIP2Q9NS61 270 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 TECRQ9NZ01 308 aaKnown RBP11.13□□□□□ -0.63
TRIM4-201ENST00000349062 SIGLEC9Q9Y336 463 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 TBL2Q9Y4P3 447 aaKnown RBP11.13□□□□□ -0.63
TRIM4-201ENST00000349062 C2orf83Q53S99 150 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 COL5A1-AS1Q5SY13 56 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 LINC00305Q7Z4B0 112 aa11.13□□□□□ -0.63
TRIM4-201ENST00000349062 RNF114Q9Y508 228 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms