RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 GTF2H5Q6ZYL4 71 aa15.09■□□□□ 0.01
SCARF1-202ENST00000348987 C19orf24Q9BVV8 132 aa15.09■□□□□ 0.01
SCARF1-202ENST00000348987 C7orf69Q9H7B7 122 aa15.09■□□□□ 0.01
SCARF1-202ENST00000348987 TNCP24821 2201 aa15.09■□□□□ 0.01
SCARF1-202ENST00000348987 COX8AP10176 69 aa15.09■□□□□ 0.01
SCARF1-202ENST00000348987 PGLYRP4Q96LB8 373 aa15.09■□□□□ 0.01
SCARF1-202ENST00000348987 AP1S3Q96PC3 154 aa15.09■□□□□ 0.01
SCARF1-202ENST00000348987 ZNF318Q5VUA4 2279 aa15.08■□□□□ 0
SCARF1-202ENST00000348987 H3BUT2 72 aa15.08■□□□□ 0
SCARF1-202ENST00000348987 GOSR1O95249 250 aa15.08■□□□□ 0
SCARF1-202ENST00000348987 DEFB109BQ30KR1 87 aa15.08■□□□□ 0
SCARF1-202ENST00000348987 FAM201AQ5SY85 155 aa15.08■□□□□ 0
SCARF1-202ENST00000348987 LINC00322Q6ZN03 302 aaPredicted RBP15.08■□□□□ 0
SCARF1-202ENST00000348987 GTSF1Q8WW33 167 aa15.08■□□□□ 0
SCARF1-202ENST00000348987 JPT1Q9UK76 154 aa15.08■□□□□ 0
SCARF1-202ENST00000348987 CSN3P07498 182 aa15.07■□□□□ 0
SCARF1-202ENST00000348987 LOXL3P58215 753 aa15.07■□□□□ 0
SCARF1-202ENST00000348987 PIP4P1Q86T03 277 aa15.07■□□□□ 0
SCARF1-202ENST00000348987 OR1N2Q8NGR9 330 aa15.07■□□□□ 0
SCARF1-202ENST00000348987 DKK4Q9UBT3 224 aa15.07■□□□□ 0
SCARF1-202ENST00000348987 SEC11AP67812 179 aa15.07■□□□□ 0
SCARF1-202ENST00000348987 IGLV1-44P01699 117 aa15.06■□□□□ 0
SCARF1-202ENST00000348987 KIR2DS2P43631 304 aa15.06■□□□□ 0
SCARF1-202ENST00000348987 PAXXQ9BUH6 204 aa15.06■□□□□ 0
SCARF1-202ENST00000348987 TMUB1Q9BVT8 246 aa15.06■□□□□ 0
SCARF1-202ENST00000348987 ANKRD11Q6UB99 2663 aaPredicted RBP15.06■□□□□ 0
SCARF1-202ENST00000348987 PSMB11A5LHX3 300 aa15.06■□□□□ 0
SCARF1-202ENST00000348987 C9orf118A6NHY6 69 aa15.06■□□□□ 0
SCARF1-202ENST00000348987 OR5AL1P0C617 328 aa15.06■□□□□ 0
SCARF1-202ENST00000348987 TEX45Q8NA69 505 aa15.06■□□□□ 0
SCARF1-202ENST00000348987 MRPL32Q9BYC8 188 aaKnown RBP15.06■□□□□ 0
SCARF1-202ENST00000348987 LINC01545Q5VT33 79 aa15.05■□□□□ 0
SCARF1-202ENST00000348987 GCSAMQ8N6F7 178 aa15.05■□□□□ 0
SCARF1-202ENST00000348987 ZNF71Q9NQZ8 489 aaPredicted RBP15.05■□□□□ 0
SCARF1-202ENST00000348987 SSBP2P81877 361 aaPredicted RBP15.05■□□□□ -0
SCARF1-202ENST00000348987 TMEM186Q96B77 213 aa15.05■□□□□ -0
SCARF1-202ENST00000348987 RPP21Q9H633 154 aaKnown RBP15.05■□□□□ -0
SCARF1-202ENST00000348987 HSPB8Q9UJY1 196 aa15.05■□□□□ -0
SCARF1-202ENST00000348987 HILPDAQ9Y5L2 63 aa15.05■□□□□ -0
SCARF1-202ENST00000348987 PRR33A8MZF0 331 aa15.04■□□□□ -0
SCARF1-202ENST00000348987 DUX4L9Q6RFH8 374 aaPredicted RBP15.04■□□□□ -0
SCARF1-202ENST00000348987 PLSCR4Q9NRQ2 329 aa15.04■□□□□ -0
SCARF1-202ENST00000348987 MUC6Q6W4X9 2439 aa15.04■□□□□ -0
SCARF1-202ENST00000348987 SRRM5B3KS81 715 aa15.04■□□□□ -0
SCARF1-202ENST00000348987 K7EP34 96 aa15.04■□□□□ -0
SCARF1-202ENST00000348987 NCR2O95944 276 aa15.04■□□□□ -0
SCARF1-202ENST00000348987 PLAUP00749 431 aa15.04■□□□□ -0
SCARF1-202ENST00000348987 SAA2P0DJI9 122 aaPredicted RBP15.04■□□□□ -0
SCARF1-202ENST00000348987 MBNL2Q5VZF2 373 aaKnown RBP15.04■□□□□ -0
SCARF1-202ENST00000348987 SEM1Q6ZVN7 128 aa15.04■□□□□ -0
SCARF1-202ENST00000348987 BSNQ9UPA5 3926 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 LGALS7P47929 136 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 TCTAP57738 103 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 PRCDQ00LT1 54 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 NEGR1Q7Z3B1 354 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 C1orf162Q8NEQ5 155 aaPredicted RBP15.03■□□□□ -0
SCARF1-202ENST00000348987 OR10W1Q8NGF6 305 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 H3BRM9 83 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 CHEK1O14757 476 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 COX7A2P2O60397 106 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 DSCAMO60469 2012 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 RBPJQ06330 500 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 BHLHA15Q7RTS1 189 aaPredicted RBP15.03■□□□□ -0
SCARF1-202ENST00000348987 RPRMLQ8N4K4 120 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 OR10AG1Q8NH19 301 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 RAB37Q96AX2 223 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 RABAC1Q9UI14 185 aa15.03■□□□□ -0
SCARF1-202ENST00000348987 A8MWL6 223 aa15.02■□□□□ -0
SCARF1-202ENST00000348987 KLK10O43240 276 aa15.02■□□□□ -0
SCARF1-202ENST00000348987 GNG7O60262 68 aa15.02■□□□□ -0
SCARF1-202ENST00000348987 CT45A1Q5HYN5 189 aa15.02■□□□□ -0
SCARF1-202ENST00000348987 MOGAT3Q86VF5 341 aa15.02■□□□□ -0
SCARF1-202ENST00000348987 OR2K2Q8NGT1 345 aa15.02■□□□□ -0
SCARF1-202ENST00000348987 CT45A3Q8NHU0 189 aa15.02■□□□□ -0
SCARF1-202ENST00000348987 NDFIP1Q9BT67 221 aa15.02■□□□□ -0
SCARF1-202ENST00000348987 MOSP00540 346 aa15.02□□□□□ -0.01
SCARF1-202ENST00000348987 CD69Q07108 199 aa15.02□□□□□ -0.01
SCARF1-202ENST00000348987 BLNKQ8WV28 456 aa15.02□□□□□ -0.01
SCARF1-202ENST00000348987 PRNDQ9UKY0 176 aa15.02□□□□□ -0.01
SCARF1-202ENST00000348987 ACACAQ13085 2346 aa15.02□□□□□ -0.01
SCARF1-202ENST00000348987 PCNX1Q96RV3 2341 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 A0A0G2JLM5 398 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 TEX50A0A1B0GTY4 177 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 P01737 135 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 IGHV3-48P01763 117 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 SLC25A5P05141 298 aaKnown RBP15.01□□□□□ -0.01
SCARF1-202ENST00000348987 C10orf113Q5VZT2 155 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 PATE2Q6UY27 113 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 TMEM116Q8NCL8 245 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 NEU4Q8WWR8 484 aaPredicted RBP15.01□□□□□ -0.01
SCARF1-202ENST00000348987 FXYD5Q96DB9 178 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 EPDR1Q9UM22 224 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 SLC25A15Q9Y619 301 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 CEP295Q9C0D2 2601 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 SPRY3O43610 288 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 RNASE2P10153 161 aaKnown RBP15.01□□□□□ -0.01
SCARF1-202ENST00000348987 KIR3DS1Q14943 382 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 TMEM177Q53S58 311 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 C2orf83Q53S99 150 aa15.01□□□□□ -0.01
SCARF1-202ENST00000348987 GPR82Q96P67 336 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms