RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 RASL11BQ9BPW5 248 aa16.11■□□□□ 0.17
CHRNA3-202ENST00000348639 TIGITQ495A1 244 aa16.11■□□□□ 0.17
CHRNA3-202ENST00000348639 ZNF329Q86UD4 541 aa16.11■□□□□ 0.17
CHRNA3-202ENST00000348639 NPIPB5A8MRT5 1133 aa16.1■□□□□ 0.17
CHRNA3-202ENST00000348639 S100A9P06702 114 aaKnown RBP16.1■□□□□ 0.17
CHRNA3-202ENST00000348639 TMEM11P17152 192 aa16.1■□□□□ 0.17
CHRNA3-202ENST00000348639 ARPC1AQ92747 370 aa16.1■□□□□ 0.17
CHRNA3-202ENST00000348639 IGF2BP2-AS1Q96M15 143 aa16.1■□□□□ 0.17
CHRNA3-202ENST00000348639 IGKV1-17P01599 117 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 MYCNOSP40205 109 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 TAS2R60P59551 318 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 ACTL10Q5JWF8 245 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 AJUBAQ96IF1 538 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 IL36BQ9NZH7 164 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 CDC42EP3Q9UKI2 254 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 HIGD1AQ9Y241 93 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 USP9XQ93008 2570 aaPredicted RBP16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 DOPEY1Q5JWR5 2465 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 A0A0U1RQK1 487 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 ZNF320A2RRD8 509 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 IFITM10A6NMD0 228 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 ERVFC1-1P60608 527 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 OR5I1Q13606 314 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 ASPHD1Q5U4P2 390 aa16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 RBM14Q96PK6 669 aaKnown RBP16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 POLR3KQ9Y2Y1 108 aaPredicted RBP16.09■□□□□ 0.17
CHRNA3-202ENST00000348639 GCGP01275 180 aa16.08■□□□□ 0.16
CHRNA3-202ENST00000348639 IGLV2-8P01709 118 aa16.08■□□□□ 0.16
CHRNA3-202ENST00000348639 FABP1P07148 127 aa16.08■□□□□ 0.16
CHRNA3-202ENST00000348639 FAM106CPP0CH98 169 aa16.08■□□□□ 0.16
CHRNA3-202ENST00000348639 TTC9CQ8N5M4 171 aa16.08■□□□□ 0.16
CHRNA3-202ENST00000348639 BBC3Q96PG8 261 aaPredicted RBP16.08■□□□□ 0.16
CHRNA3-202ENST00000348639 TRAV9-1A0A075B6T8 112 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 NBEAP1P0C6P0 100 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 RD3LP0DJH9 198 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 GP9P14770 177 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 LYZP61626 148 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 NDPQ00604 133 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 PITPNC1Q9UKF7 332 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 SLC17A3O00476 420 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 PEX7O00628 323 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 CNN1P51911 297 aaKnown RBP16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 RANP62826 216 aaKnown RBP16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 FAM168AQ92567 244 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 FANCD2OSQ96PS1 177 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 V9GYV3 84 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 MYO18BQ8IUG5 2567 aa16.07■□□□□ 0.16
CHRNA3-202ENST00000348639 UTP20O75691 2785 aaKnown RBP16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 IGLV11-55A0A075B6I3 123 aa16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 SAA4P35542 130 aa16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 KLF17Q5JT82 389 aaPredicted RBP16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 HIST3H2BBQ8N257 126 aa16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 PIMREGQ9BSJ6 248 aa16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 OSTCQ9NRP0 149 aa16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 C1RLQ9NZP8 487 aa16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 MRPL27Q9P0M9 148 aaKnown RBP16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 ABCA1O95477 2261 aa16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 ISLRO14498 428 aa16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 BRS3P32247 399 aa16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 RPL15P61313 204 aaKnown RBP16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 GFI1BQ5VTD9 330 aa16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 Q8N9W7 124 aa16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 BLNKQ8WV28 456 aa16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 SLC25A39Q9BZJ4 359 aaPredicted RBP16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 GAR1Q9NY12 217 aaKnown RBP16.06■□□□□ 0.16
CHRNA3-202ENST00000348639 CRYBG3Q68DQ2 2970 aa16.05■□□□□ 0.16
CHRNA3-202ENST00000348639 SNRPCP09234 159 aaKnown RBP16.05■□□□□ 0.16
CHRNA3-202ENST00000348639 LEMD1Q68G75 181 aa16.05■□□□□ 0.16
CHRNA3-202ENST00000348639 LINC00479Q96M42 142 aa16.05■□□□□ 0.16
CHRNA3-202ENST00000348639 RPEL1Q2QD12 228 aa16.04■□□□□ 0.16
CHRNA3-202ENST00000348639 FAM120AOSQ5T036 256 aa16.04■□□□□ 0.16
CHRNA3-202ENST00000348639 ZNF48Q96MX3 618 aaPredicted RBP16.04■□□□□ 0.16
CHRNA3-202ENST00000348639 TMEM14CQ9P0S9 112 aa16.04■□□□□ 0.16
CHRNA3-202ENST00000348639 EPDR1Q9UM22 224 aa16.04■□□□□ 0.16
CHRNA3-202ENST00000348639 TRAV30A0A087WSZ9 112 aa16.04■□□□□ 0.16
CHRNA3-202ENST00000348639 IGHV7-81A0A0B4J1V7 117 aa16.04■□□□□ 0.16
CHRNA3-202ENST00000348639 TOMM40O96008 361 aa16.04■□□□□ 0.16
CHRNA3-202ENST00000348639 ATP5J2P56134 94 aa16.04■□□□□ 0.16
CHRNA3-202ENST00000348639 PGPA6NDG6 321 aa16.03■□□□□ 0.16
CHRNA3-202ENST00000348639 NPFFO15130 113 aa16.03■□□□□ 0.16
CHRNA3-202ENST00000348639 HLA-DRB1P01911 266 aa16.03■□□□□ 0.16
CHRNA3-202ENST00000348639 EGR2P11161 476 aaPredicted RBP16.03■□□□□ 0.16
CHRNA3-202ENST00000348639 S100A2P29034 98 aa16.03■□□□□ 0.16
CHRNA3-202ENST00000348639 ZNF600Q6ZNG1 722 aa16.03■□□□□ 0.16
CHRNA3-202ENST00000348639 GPR61Q9BZJ8 451 aa16.03■□□□□ 0.16
CHRNA3-202ENST00000348639 RNASE7Q9H1E1 156 aaKnown RBP16.03■□□□□ 0.16
CHRNA3-202ENST00000348639 TRAPPC1Q9Y5R8 145 aa16.03■□□□□ 0.16
CHRNA3-202ENST00000348639 IGHV4-61A0A0C4DH41 118 aa16.02■□□□□ 0.16
CHRNA3-202ENST00000348639 SLC25A5P05141 298 aaKnown RBP16.02■□□□□ 0.16
CHRNA3-202ENST00000348639 MGST1P10620 155 aaKnown RBP16.02■□□□□ 0.16
CHRNA3-202ENST00000348639 MFAP4P55083 255 aa16.02■□□□□ 0.16
CHRNA3-202ENST00000348639 COA6Q5JTJ3 125 aaKnown RBP16.02■□□□□ 0.16
CHRNA3-202ENST00000348639 PCP4L1A6NKN8 68 aa16.02■□□□□ 0.15
CHRNA3-202ENST00000348639 HIST1H1BP16401 226 aaKnown RBP16.02■□□□□ 0.15
CHRNA3-202ENST00000348639 YPEL3P61236 119 aaPredicted RBP16.02■□□□□ 0.15
CHRNA3-202ENST00000348639 PAX8Q06710 450 aa16.02■□□□□ 0.15
CHRNA3-202ENST00000348639 TMEM183BQ1AE95 376 aa16.02■□□□□ 0.15
CHRNA3-202ENST00000348639 CLEC2AQ6UVW9 174 aa16.02■□□□□ 0.15
CHRNA3-202ENST00000348639 PIP4P2Q8N4L2 257 aa16.02■□□□□ 0.15
CHRNA3-202ENST00000348639 ZNF491Q8N8L2 437 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms