RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 ABHD17AQ96GS6 310 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 HBDP02042 147 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 EFNB3Q15768 340 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 Q6AWC8 147 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 FAM90A1Q86YD7 464 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 LY96Q9Y6Y9 160 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 CREBBPQ92793 2442 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 ATP5LO75964 103 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 MGPP08493 103 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 B3GALT5-AS1P59052 145 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 RBX1P62877 108 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 OSR1Q8TAX0 266 aaPredicted RBP12.82□□□□□ -0.36
SRPK1-201ENST00000346162 SS18L2Q9UHA2 77 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 FRMPD3Q5JV73 1810 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 B9A039 149 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 TMEM42Q69YG0 159 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 FAM57AQ8TBR7 257 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 NBEAP1P0C6P0 100 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.81□□□□□ -0.36
SRPK1-201ENST00000346162 CACNA1BQ00975 2339 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 ABCA4P78363 2273 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 TM4SF5O14894 197 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 TFF1P04155 84 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 OR4A5Q8NH83 315 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 C18orf32Q8TCD1 76 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 PLXND1Q9Y4D7 1925 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 IGKV3-7A0A075B6H7 116 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 TRAV8-1A0A0A6YYK1 113 aa12.81□□□□□ -0.36
SRPK1-201ENST00000346162 ABCA1O95477 2261 aa12.8□□□□□ -0.36
SRPK1-201ENST00000346162 LINC01560Q8TB33 94 aa12.8□□□□□ -0.36
SRPK1-201ENST00000346162 NUPR1O60356 82 aa12.8□□□□□ -0.36
SRPK1-201ENST00000346162 IL18BPO95998 194 aa12.8□□□□□ -0.36
SRPK1-201ENST00000346162 ETV2O00321 342 aaPredicted RBP12.8□□□□□ -0.36
SRPK1-201ENST00000346162 IL15RAQ13261 267 aa12.8□□□□□ -0.36
SRPK1-201ENST00000346162 RAMP3O60896 148 aa12.8□□□□□ -0.36
SRPK1-201ENST00000346162 APOBEC3AP31941 199 aaPredicted RBP12.8□□□□□ -0.36
SRPK1-201ENST00000346162 PDLIM4P50479 330 aa12.8□□□□□ -0.36
SRPK1-201ENST00000346162 ZNF138P52744 262 aa12.8□□□□□ -0.36
SRPK1-201ENST00000346162 BSPH1Q075Z2 132 aa12.8□□□□□ -0.36
SRPK1-201ENST00000346162 SRSF7Q16629 238 aaKnown RBP eCLIP12.8□□□□□ -0.363e-6■□□□□ 8.6
SRPK1-201ENST00000346162 LRRK1Q38SD2 2015 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 TRBV20OR9-2A0A075B6H5 130 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 ADIPOQQ15848 244 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 TMEM95Q3KNT9 176 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 DEFB125Q8N687 156 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 PYGO2Q9BRQ0 406 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 PLA2G2EQ9NZK7 142 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 B5MCH6 92 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 LGALS3P17931 250 aaKnown RBP12.79□□□□□ -0.36
SRPK1-201ENST00000346162 FOXL2NBQ6ZUU3 175 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 FMC1Q96HJ9 113 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 RAXQ9Y2V3 346 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 YPEL1O60688 119 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 NDUFA3O95167 84 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 LINC00305Q7Z4B0 112 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 COQ2Q96H96 371 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 YPEL2Q96QA6 119 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 TANC1Q9C0D5 1861 aa12.79□□□□□ -0.36
SRPK1-201ENST00000346162 FOXF2Q12947 444 aa12.78□□□□□ -0.36
SRPK1-201ENST00000346162 ZNF581Q9P0T4 197 aa12.78□□□□□ -0.36
SRPK1-201ENST00000346162 C17orf100A8MU93 164 aa12.78□□□□□ -0.36
SRPK1-201ENST00000346162 IFI27L2Q9H2X8 130 aa12.78□□□□□ -0.36
SRPK1-201ENST00000346162 FAM106CPP0CH98 169 aa12.78□□□□□ -0.36
SRPK1-201ENST00000346162 PEAR1Q5VY43 1037 aaPredicted RBP12.78□□□□□ -0.36
SRPK1-201ENST00000346162 TMEM14EPQ6UXP3 125 aa12.78□□□□□ -0.36
SRPK1-201ENST00000346162 SHANK1Q9Y566 2161 aa12.78□□□□□ -0.36
SRPK1-201ENST00000346162 DOPEY2Q9Y3R5 2298 aa12.78□□□□□ -0.36
SRPK1-201ENST00000346162 IGHV1-18A0A0C4DH31 117 aa12.78□□□□□ -0.36
SRPK1-201ENST00000346162 J3KRW8 73 aa12.78□□□□□ -0.36
SRPK1-201ENST00000346162 MORN2Q502X0 79 aa12.78□□□□□ -0.36
SRPK1-201ENST00000346162 TRAV26-1A0A087WT03 109 aa12.77□□□□□ -0.36
SRPK1-201ENST00000346162 SH2D7A6NKC9 451 aaPredicted RBP12.77□□□□□ -0.36
SRPK1-201ENST00000346162 E9PLN8 166 aa12.77□□□□□ -0.36
SRPK1-201ENST00000346162 F2Z2F3 143 aa12.77□□□□□ -0.36
SRPK1-201ENST00000346162 DPM2O94777 84 aa12.77□□□□□ -0.36
SRPK1-201ENST00000346162 ZNF726P1Q15940 193 aa12.77□□□□□ -0.36
SRPK1-201ENST00000346162 SYT8Q8NBV8 401 aa12.77□□□□□ -0.36
SRPK1-201ENST00000346162 TICRRQ7Z2Z1 1910 aa12.77□□□□□ -0.37
SRPK1-201ENST00000346162 SMAD7O15105 426 aaKnown RBP12.77□□□□□ -0.37
SRPK1-201ENST00000346162 MOSP00540 346 aa12.77□□□□□ -0.37
SRPK1-201ENST00000346162 FCGR2BP31994 310 aaPredicted RBP12.77□□□□□ -0.37
SRPK1-201ENST00000346162 GNG5P63218 68 aa12.77□□□□□ -0.37
SRPK1-201ENST00000346162 C5orf24Q7Z6I8 188 aa12.77□□□□□ -0.37
SRPK1-201ENST00000346162 DLX4Q92988 240 aaPredicted RBP12.77□□□□□ -0.37
SRPK1-201ENST00000346162 BDP1A6H8Y1 2624 aa12.77□□□□□ -0.37
SRPK1-201ENST00000346162 PRSS8Q16651 343 aa12.77□□□□□ -0.37
SRPK1-201ENST00000346162 SMIM20Q8N5G0 67 aa12.77□□□□□ -0.37
SRPK1-201ENST00000346162 NUP35Q8NFH5 326 aa12.77□□□□□ -0.37
SRPK1-201ENST00000346162 MBNL3Q9NUK0 354 aaKnown RBP12.77□□□□□ -0.37
SRPK1-201ENST00000346162 LINC00312Q9Y6C7 94 aa12.77□□□□□ -0.37
SRPK1-201ENST00000346162 MED13LQ71F56 2210 aa12.77□□□□□ -0.37
SRPK1-201ENST00000346162 PSPNO60542 156 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 CSRP1P21291 193 aaKnown RBP12.76□□□□□ -0.37
SRPK1-201ENST00000346162 CACNG8Q8WXS5 425 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 SRSF8Q9BRL6 282 aaKnown RBP12.76□□□□□ -0.37
SRPK1-201ENST00000346162 ANOS1P23352 680 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 HAPLN4Q86UW8 402 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 GGTLC1Q9BX51 225 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 TRAV8-4A0A0B4J246 113 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 A0A1W2PPM0 123 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms