RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 OR2K2Q8NGT1 345 aa9.01□□□□□ -0.97
SNCA-202ENST00000345009 METTL26Q96S19 204 aa9.01□□□□□ -0.97
SNCA-202ENST00000345009 TRGV9Q99603 122 aa9.01□□□□□ -0.97
SNCA-202ENST00000345009 FBN3Q75N90 2809 aa9□□□□□ -0.97
SNCA-202ENST00000345009 A0A1W2PS18 150 aa9□□□□□ -0.97
SNCA-202ENST00000345009 TMEM213A2RRL7 107 aa9□□□□□ -0.97
SNCA-202ENST00000345009 FAM24AA6NFZ4 105 aa9□□□□□ -0.97
SNCA-202ENST00000345009 PRSS46E5RG02 174 aa9□□□□□ -0.97
SNCA-202ENST00000345009 CST7O76096 145 aa9□□□□□ -0.97
SNCA-202ENST00000345009 TOMM40O96008 361 aa9□□□□□ -0.97
SNCA-202ENST00000345009 IGLV1-51P01701 117 aa9□□□□□ -0.97
SNCA-202ENST00000345009 GIPP09681 153 aaPredicted RBP9□□□□□ -0.97
SNCA-202ENST00000345009 NPPCP23582 126 aa9□□□□□ -0.97
SNCA-202ENST00000345009 NUP62P37198 522 aaPredicted RBP9□□□□□ -0.97
SNCA-202ENST00000345009 RAP2BP61225 183 aa9□□□□□ -0.97
SNCA-202ENST00000345009 BAXQ07812 192 aa9□□□□□ -0.97
SNCA-202ENST00000345009 EGFEM1PQ0D2K5 195 aa9□□□□□ -0.97
SNCA-202ENST00000345009 LAMTOR1Q6IAA8 161 aa9□□□□□ -0.97
SNCA-202ENST00000345009 LCN12Q6JVE5 192 aa9□□□□□ -0.97
SNCA-202ENST00000345009 S100A7AQ86SG5 101 aa9□□□□□ -0.97
SNCA-202ENST00000345009 LILRB2Q8N423 598 aa9□□□□□ -0.97
SNCA-202ENST00000345009 TMEM217Q8N7C4 229 aa9□□□□□ -0.97
SNCA-202ENST00000345009 OR51G1Q8NGK1 321 aa9□□□□□ -0.97
SNCA-202ENST00000345009 GRAMD2BQ96HH9 432 aa9□□□□□ -0.97
SNCA-202ENST00000345009 TMEM231Q9H6L2 316 aa9□□□□□ -0.97
SNCA-202ENST00000345009 PMS2P5A8MQ11 134 aa8.99□□□□□ -0.97
SNCA-202ENST00000345009 C8orf88P0DMB2 117 aa8.99□□□□□ -0.97
SNCA-202ENST00000345009 SELENOTP62341 195 aa8.99□□□□□ -0.97
SNCA-202ENST00000345009 SLC38A11Q08AI6 406 aa8.99□□□□□ -0.97
SNCA-202ENST00000345009 BEAN1Q3B7T3 259 aa8.99□□□□□ -0.97
SNCA-202ENST00000345009 TEPPQ6URK8 271 aa8.99□□□□□ -0.97
SNCA-202ENST00000345009 RBPMS2Q6ZRY4 209 aaKnown RBP8.99□□□□□ -0.97
SNCA-202ENST00000345009 THAP8Q8NA92 274 aa8.99□□□□□ -0.97
SNCA-202ENST00000345009 OR11H7Q8NGC8 314 aa8.99□□□□□ -0.97
SNCA-202ENST00000345009 C11orf1Q9H5F2 150 aa8.99□□□□□ -0.97
SNCA-202ENST00000345009 UQCC1Q9NVA1 299 aa8.99□□□□□ -0.97
SNCA-202ENST00000345009 ZNF256Q9Y2P7 627 aaPredicted RBP8.99□□□□□ -0.97
SNCA-202ENST00000345009 IGHV3OR16-8A0A075B7F1 116 aa8.98□□□□□ -0.97
SNCA-202ENST00000345009 TRAV25A0A0B4J276 109 aa8.98□□□□□ -0.97
SNCA-202ENST00000345009 IGHV7-4-1A0A0J9YVY3 117 aa8.98□□□□□ -0.97
SNCA-202ENST00000345009 ZNF207O43670 478 aaKnown RBP8.98□□□□□ -0.97
SNCA-202ENST00000345009 IL4P05112 153 aa8.98□□□□□ -0.97
SNCA-202ENST00000345009 PSG1P11464 419 aa8.98□□□□□ -0.97
SNCA-202ENST00000345009 EIF2B2P49770 351 aaKnown RBP8.98□□□□□ -0.97
SNCA-202ENST00000345009 DEFB114Q30KQ6 69 aa8.98□□□□□ -0.97
SNCA-202ENST00000345009 BPIFCQ8NFQ6 507 aa8.98□□□□□ -0.97
SNCA-202ENST00000345009 TMEM147Q9BVK8 224 aa8.98□□□□□ -0.97
SNCA-202ENST00000345009 OR5AC2Q9NZP5 309 aa8.98□□□□□ -0.97
SNCA-202ENST00000345009 SMPXQ9UHP9 88 aa8.98□□□□□ -0.97
SNCA-202ENST00000345009 IGSF23A1L1A6 192 aa8.97□□□□□ -0.97
SNCA-202ENST00000345009 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.97□□□□□ -0.97
SNCA-202ENST00000345009 H0YIZ8 118 aa8.97□□□□□ -0.97
SNCA-202ENST00000345009 RPL12P30050 165 aaKnown RBP8.97□□□□□ -0.97
SNCA-202ENST00000345009 CD300EQ496F6 205 aaPredicted RBP8.97□□□□□ -0.97
SNCA-202ENST00000345009 WDR89Q96FK6 387 aaPredicted RBP8.97□□□□□ -0.97
SNCA-202ENST00000345009 RNF126Q9BV68 326 aa8.97□□□□□ -0.97
SNCA-202ENST00000345009 PBDC1Q9BVG4 233 aa8.97□□□□□ -0.97
SNCA-202ENST00000345009 RHPN1-AS1Q9BWJ2 59 aa8.97□□□□□ -0.97
SNCA-202ENST00000345009 MBD2Q9UBB5 411 aa8.97□□□□□ -0.97
SNCA-202ENST00000345009 RABAC1Q9UI14 185 aa8.97□□□□□ -0.97
SNCA-202ENST00000345009 CMYA5Q8N3K9 4069 aa8.96□□□□□ -0.97
SNCA-202ENST00000345009 IGKV1D-37A0A075B6S9 117 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 MPDU1O75352 247 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 CCNKO75909 580 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 DFFBO76075 338 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 HNRNPCP07910 306 aaKnown RBP eCLIP8.96□□□□□ -0.98
SNCA-202ENST00000345009 GP9P14770 177 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 CRYBB3P26998 211 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 PAFAH1B2P68402 229 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 DEFA6Q01524 100 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 EWSR1Q01844 656 aaKnown RBP eCLIP8.96□□□□□ -0.98
SNCA-202ENST00000345009 NHLH2Q02577 135 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 ZNF90Q03938 601 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 ARL16Q0P5N6 197 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 OR2F1Q13607 317 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 PXDC1Q5TGL8 231 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 BTNL8Q6UX41 500 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 CYP2G1PQ6ZSU1 146 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 ZNF546Q86UE3 836 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 GTSCR1Q86UQ5 136 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 INO80EQ8NBZ0 244 aaPredicted RBP8.96□□□□□ -0.98
SNCA-202ENST00000345009 OR5C1Q8NGR4 320 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 OR2T35Q8NGX2 323 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 PPP1R14BQ96C90 147 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 RNF125Q96EQ8 232 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 RNF24Q9Y225 148 aa8.96□□□□□ -0.98
SNCA-202ENST00000345009 IGKV1OR2-108A0A075B7D4 117 aa8.95□□□□□ -0.98
SNCA-202ENST00000345009 WI2-2373I1.2A0A1W2PRP0 233 aa8.95□□□□□ -0.98
SNCA-202ENST00000345009 CHEK1O14757 476 aa8.95□□□□□ -0.98
SNCA-202ENST00000345009 LYL1P12980 280 aa8.95□□□□□ -0.98
SNCA-202ENST00000345009 AP2S1P53680 142 aaPredicted RBP8.95□□□□□ -0.98
SNCA-202ENST00000345009 LYZP61626 148 aa8.95□□□□□ -0.98
SNCA-202ENST00000345009 RPL11P62913 178 aaKnown RBP8.95□□□□□ -0.98
SNCA-202ENST00000345009 GUCA2BQ16661 112 aa8.95□□□□□ -0.98
SNCA-202ENST00000345009 VWC2Q2TAL6 325 aa8.95□□□□□ -0.98
SNCA-202ENST00000345009 ADAMTSL5Q6ZMM2 481 aa8.95□□□□□ -0.98
SNCA-202ENST00000345009 HAPLN4Q86UW8 402 aa8.95□□□□□ -0.98
SNCA-202ENST00000345009 ZNF709Q8N972 641 aa8.95□□□□□ -0.98
SNCA-202ENST00000345009 KRTAP9-2Q9BYQ4 174 aa8.95□□□□□ -0.98
SNCA-202ENST00000345009 MLXQ9UH92 298 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms