RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 HNRNPCP07910 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
HMGN3-202ENST00000344726 PSG1P11464 419 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 CMC4P56277 68 aaPredicted RBP10.61□□□□□ -0.71
HMGN3-202ENST00000344726 DEFB131AP59861 70 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 LEMD1Q68G75 181 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 C16orf54Q6UWD8 224 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 STPG3Q8N7X2 389 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 STXBP6Q8NFX7 210 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 DCANP1Q8TF63 244 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 GLMPQ8WWB7 406 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 RNF183Q96D59 192 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 NDUFA13Q9P0J0 144 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 RABAC1Q9UI14 185 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 TP53TG1Q9Y2A0 90 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 PLA2G10O15496 165 aa10.6□□□□□ -0.71
HMGN3-202ENST00000344726 OR4E1P0C645 316 aa10.6□□□□□ -0.71
HMGN3-202ENST00000344726 RD3LP0DJH9 198 aa10.6□□□□□ -0.71
HMGN3-202ENST00000344726 ANXA7P20073 488 aaKnown RBP10.6□□□□□ -0.71
HMGN3-202ENST00000344726 GPX4P36969 197 aaPredicted RBP10.6□□□□□ -0.71
HMGN3-202ENST00000344726 ATP5IP56385 69 aaPredicted RBP10.6□□□□□ -0.71
HMGN3-202ENST00000344726 ZNF90Q03938 601 aa10.6□□□□□ -0.71
HMGN3-202ENST00000344726 DHRS2Q13268 280 aa10.6□□□□□ -0.71
HMGN3-202ENST00000344726 IGKV1OR2-108A0A075B7D4 117 aa10.59□□□□□ -0.71
HMGN3-202ENST00000344726 A0A0J9YWU9 116 aa10.59□□□□□ -0.71
HMGN3-202ENST00000344726 PRSS46E5RG02 174 aa10.59□□□□□ -0.71
HMGN3-202ENST00000344726 WRBO00258 174 aa10.59□□□□□ -0.71
HMGN3-202ENST00000344726 SYNGR2O43760 224 aa10.59□□□□□ -0.71
HMGN3-202ENST00000344726 LYG2Q86SG7 212 aa10.59□□□□□ -0.71
HMGN3-202ENST00000344726 OR51G1Q8NGK1 321 aa10.59□□□□□ -0.71
HMGN3-202ENST00000344726 IL17DQ8TAD2 202 aa10.59□□□□□ -0.71
HMGN3-202ENST00000344726 NARS2Q96I59 477 aaKnown RBP10.59□□□□□ -0.71
HMGN3-202ENST00000344726 SLC35E1Q96K37 410 aa10.59□□□□□ -0.71
HMGN3-202ENST00000344726 C7orf50Q9BRJ6 194 aaKnown RBP10.59□□□□□ -0.71
HMGN3-202ENST00000344726 CSTL1Q9H114 145 aa10.59□□□□□ -0.71
HMGN3-202ENST00000344726 BUB3O43684 328 aa10.58□□□□□ -0.72
HMGN3-202ENST00000344726 MED6O75586 246 aa10.58□□□□□ -0.72
HMGN3-202ENST00000344726 RAB11AP62491 216 aa10.58□□□□□ -0.72
HMGN3-202ENST00000344726 RNF125Q96EQ8 232 aa10.58□□□□□ -0.72
HMGN3-202ENST00000344726 GRAMD2BQ96HH9 432 aa10.58□□□□□ -0.72
HMGN3-202ENST00000344726 PAIP2BQ9ULR5 123 aaKnown RBP10.58□□□□□ -0.72
HMGN3-202ENST00000344726 ZFP92A6NM28 416 aa10.57□□□□□ -0.72
HMGN3-202ENST00000344726 CENPXA8MT69 81 aa10.57□□□□□ -0.72
HMGN3-202ENST00000344726 H3BP45 60 aa10.57□□□□□ -0.72
HMGN3-202ENST00000344726 ZNF688P0C7X2 276 aa10.57□□□□□ -0.72
HMGN3-202ENST00000344726 ID3Q02535 119 aa10.57□□□□□ -0.72
HMGN3-202ENST00000344726 OR4D5Q8NGN0 318 aa10.57□□□□□ -0.72
HMGN3-202ENST00000344726 CIB3Q96Q77 187 aaPredicted RBP10.57□□□□□ -0.72
HMGN3-202ENST00000344726 HELTA6NFD8 242 aa10.56□□□□□ -0.72
HMGN3-202ENST00000344726 LYRM1O43325 122 aa10.56□□□□□ -0.72
HMGN3-202ENST00000344726 POLR2GP62487 172 aaKnown RBP eCLIP10.56□□□□□ -0.72
HMGN3-202ENST00000344726 C4orf46Q504U0 113 aa10.56□□□□□ -0.72
HMGN3-202ENST00000344726 SPANXN5Q5MJ07 72 aa10.56□□□□□ -0.72
HMGN3-202ENST00000344726 THAP8Q8NA92 274 aa10.56□□□□□ -0.72
HMGN3-202ENST00000344726 COQ8AQ8NI60 647 aa10.56□□□□□ -0.72
HMGN3-202ENST00000344726 PBDC1Q9BVG4 233 aa10.56□□□□□ -0.72
HMGN3-202ENST00000344726 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
HMGN3-202ENST00000344726 GIG44P09565 113 aaPredicted RBP10.55□□□□□ -0.72
HMGN3-202ENST00000344726 EIF2B2P49770 351 aaKnown RBP10.55□□□□□ -0.72
HMGN3-202ENST00000344726 OR2F1Q13607 317 aa10.55□□□□□ -0.72
HMGN3-202ENST00000344726 PMS2P11Q13670 270 aa10.55□□□□□ -0.72
HMGN3-202ENST00000344726 SIGLEC15Q6ZMC9 328 aa10.55□□□□□ -0.72
HMGN3-202ENST00000344726 TRPT1Q86TN4 253 aaKnown RBP10.55□□□□□ -0.72
HMGN3-202ENST00000344726 TRGV9Q99603 122 aa10.55□□□□□ -0.72
HMGN3-202ENST00000344726 C20orf85Q9H1P6 137 aa10.55□□□□□ -0.72
HMGN3-202ENST00000344726 CA1P00915 261 aaPredicted RBP10.54□□□□□ -0.72
HMGN3-202ENST00000344726 NKX2-1P43699 371 aaPredicted RBP10.54□□□□□ -0.72
HMGN3-202ENST00000344726 AP2S1P53680 142 aaPredicted RBP10.54□□□□□ -0.72
HMGN3-202ENST00000344726 PAX9P55771 341 aa10.54□□□□□ -0.72
HMGN3-202ENST00000344726 LYZP61626 148 aa10.54□□□□□ -0.72
HMGN3-202ENST00000344726 OR8G2PQ6IF36 304 aa10.54□□□□□ -0.72
HMGN3-202ENST00000344726 GSG1LQ6UXU4 331 aa10.54□□□□□ -0.72
HMGN3-202ENST00000344726 TMEM182Q6ZP80 229 aaPredicted RBP10.54□□□□□ -0.72
HMGN3-202ENST00000344726 STHQ8IWL8 128 aa10.54□□□□□ -0.72
HMGN3-202ENST00000344726 GATAD1Q8WUU5 269 aa10.54□□□□□ -0.72
HMGN3-202ENST00000344726 MITD1Q8WV92 249 aa10.54□□□□□ -0.72
HMGN3-202ENST00000344726 NRN1Q9NPD7 142 aa10.54□□□□□ -0.72
HMGN3-202ENST00000344726 STRAPQ9Y3F4 350 aaKnown RBP10.54□□□□□ -0.72
HMGN3-202ENST00000344726 PMS2P5A8MQ11 134 aa10.53□□□□□ -0.72
HMGN3-202ENST00000344726 SSSCA1O60232 199 aa10.53□□□□□ -0.72
HMGN3-202ENST00000344726 CCNKO75909 580 aa10.53□□□□□ -0.72
HMGN3-202ENST00000344726 IFNA21P01568 189 aa10.53□□□□□ -0.72
HMGN3-202ENST00000344726 TCRBP04435 133 aa10.53□□□□□ -0.72
HMGN3-202ENST00000344726 RPP30P78346 268 aaKnown RBP10.53□□□□□ -0.72
HMGN3-202ENST00000344726 PSMG4Q5JS54 123 aa10.53□□□□□ -0.72
HMGN3-202ENST00000344726 ACOT7LQ6ZUV0 252 aa10.53□□□□□ -0.72
HMGN3-202ENST00000344726 PSENENQ9NZ42 101 aa10.53□□□□□ -0.72
HMGN3-202ENST00000344726 KMT2AQ03164 3969 aa10.52□□□□□ -0.72
HMGN3-202ENST00000344726 TRAV6A0A075B6T7 132 aa10.52□□□□□ -0.73
HMGN3-202ENST00000344726 CXorf65A6NEN9 183 aa10.52□□□□□ -0.73
HMGN3-202ENST00000344726 SNRPGP15A8MWD9 76 aa10.52□□□□□ -0.73
HMGN3-202ENST00000344726 JTBO76095 146 aa10.52□□□□□ -0.73
HMGN3-202ENST00000344726 C4BPBP20851 252 aa10.52□□□□□ -0.73
HMGN3-202ENST00000344726 GATA2P23769 480 aaPredicted RBP10.52□□□□□ -0.73
HMGN3-202ENST00000344726 IAH1Q2TAA2 248 aaPredicted RBP10.52□□□□□ -0.73
HMGN3-202ENST00000344726 CNPY1Q3B7I2 92 aa10.52□□□□□ -0.73
HMGN3-202ENST00000344726 ACTL10Q5JWF8 245 aa10.52□□□□□ -0.73
HMGN3-202ENST00000344726 LCE2CQ5TA81 110 aa10.52□□□□□ -0.73
HMGN3-202ENST00000344726 ZBTB8BQ8NAP8 495 aaPredicted RBP10.52□□□□□ -0.73
HMGN3-202ENST00000344726 OR11H2Q8NH07 326 aa10.52□□□□□ -0.73
HMGN3-202ENST00000344726 RAB40CQ96S21 281 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms