RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 RNF223E7ERA6 249 aa15.69■□□□□ 0.1
RTN1-202ENST00000342503 CRYBA1P05813 215 aa15.69■□□□□ 0.1
RTN1-202ENST00000342503 FABP1P07148 127 aa15.69■□□□□ 0.1
RTN1-202ENST00000342503 LOXL1Q08397 574 aaPredicted RBP15.69■□□□□ 0.1
RTN1-202ENST00000342503 LRRC75A-AS1Q8N1F1 130 aa15.69■□□□□ 0.1
RTN1-202ENST00000342503 FXYD5Q96DB9 178 aa15.69■□□□□ 0.1
RTN1-202ENST00000342503 ZNF48Q96MX3 618 aaPredicted RBP15.69■□□□□ 0.1
RTN1-202ENST00000342503 HIGD1AQ9Y241 93 aa15.69■□□□□ 0.1
RTN1-202ENST00000342503 CXorf65A6NEN9 183 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 GGTLC3B5MD39 225 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 GNG7O60262 68 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 TOMM40O96008 361 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 ZNF343Q6P1L6 599 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 TMEM242Q9NWH2 141 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 C21orf62Q9NYP8 219 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 FBXL7Q9UJT9 491 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 CELSR2Q9HCU4 2923 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 TRAV30A0A087WSZ9 112 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 F8W735 103 aaPredicted RBP15.68■□□□□ 0.1
RTN1-202ENST00000342503 AMY1AP04745 511 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 HIST1H1BP16401 226 aaKnown RBP15.68■□□□□ 0.1
RTN1-202ENST00000342503 Q56UQ5 140 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 CTDSP1Q9GZU7 261 aa15.68■□□□□ 0.1
RTN1-202ENST00000342503 CSMD1Q96PZ7 3565 aa15.67■□□□□ 0.1
RTN1-202ENST00000342503 H3BUX3 64 aa15.67■□□□□ 0.1
RTN1-202ENST00000342503 IGHV3-23P01764 117 aa15.67■□□□□ 0.1
RTN1-202ENST00000342503 FOLR2P14207 255 aa15.67■□□□□ 0.1
RTN1-202ENST00000342503 SUMO1P63165 101 aaKnown RBP15.67■□□□□ 0.1
RTN1-202ENST00000342503 LY6EQ16553 131 aa15.67■□□□□ 0.1
RTN1-202ENST00000342503 Q5PR19 223 aa15.67■□□□□ 0.1
RTN1-202ENST00000342503 STXBP6Q8NFX7 210 aa15.67■□□□□ 0.1
RTN1-202ENST00000342503 MRPL27Q9P0M9 148 aaKnown RBP15.67■□□□□ 0.1
RTN1-202ENST00000342503 ABCA1O95477 2261 aa15.67■□□□□ 0.1
RTN1-202ENST00000342503 CR1P17927 2039 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 TRBV20OR9-2A0A075B6H5 130 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 G3V318 75 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 CLDN34H7C241 214 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 J3QKU1 62 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 TGFAP01135 160 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 CRYBB3P26998 211 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 ELOBQ15370 118 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 KLK9Q2XQG4 91 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 LINC01551Q86U37 167 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 AURKAIP1Q9NWT8 199 aaPredicted RBP15.66■□□□□ 0.1
RTN1-202ENST00000342503 KLK9Q9UKQ9 250 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 PRELID1Q9Y255 219 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 URGCP-MRPS24S4R325 110 aa15.66■□□□□ 0.1
RTN1-202ENST00000342503 A6NDX4 124 aa15.65■□□□□ 0.1
RTN1-202ENST00000342503 PGPEP1LA6NFU8 196 aa15.65■□□□□ 0.1
RTN1-202ENST00000342503 J3QLI3 93 aa15.65■□□□□ 0.1
RTN1-202ENST00000342503 SNRPCP09234 159 aaKnown RBP15.65■□□□□ 0.1
RTN1-202ENST00000342503 RAB5AP20339 215 aa15.65■□□□□ 0.1
RTN1-202ENST00000342503 YPEL3P61236 119 aaPredicted RBP15.65■□□□□ 0.1
RTN1-202ENST00000342503 LEMD1Q68G75 181 aa15.65■□□□□ 0.1
RTN1-202ENST00000342503 Q8WTZ3 238 aa15.65■□□□□ 0.1
RTN1-202ENST00000342503 TMEM68Q96MH6 324 aa15.65■□□□□ 0.1
RTN1-202ENST00000342503 SLC25A39Q9BZJ4 359 aaPredicted RBP15.65■□□□□ 0.1
RTN1-202ENST00000342503 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.65■□□□□ 0.1
RTN1-202ENST00000342503 ZNF491Q8N8L2 437 aa15.65■□□□□ 0.1
RTN1-202ENST00000342503 ELOVL1Q9BW60 279 aa15.65■□□□□ 0.1
RTN1-202ENST00000342503 MLXQ9UH92 298 aa15.65■□□□□ 0.1
RTN1-202ENST00000342503 WI2-2373I1.2A0A1W2PRP0 233 aa15.64■□□□□ 0.09
RTN1-202ENST00000342503 CXCL1P09341 107 aa15.64■□□□□ 0.09
RTN1-202ENST00000342503 GP9P14770 177 aa15.64■□□□□ 0.09
RTN1-202ENST00000342503 RPL35P42766 123 aaKnown RBP15.64■□□□□ 0.09
RTN1-202ENST00000342503 ZFHX3Q15911 3703 aa15.64■□□□□ 0.09
RTN1-202ENST00000342503 CSMD2Q7Z408 3487 aa15.64■□□□□ 0.09
RTN1-202ENST00000342503 IL4P05112 153 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 IGHV4-31P0DP07 118 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 C9orf152Q5JTZ5 239 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 VN1R17PQ8TDU5 208 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 BLNKQ8WV28 456 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 RNF125Q96EQ8 232 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 USP9YO00507 2555 aaPredicted RBP15.63■□□□□ 0.09
RTN1-202ENST00000342503 TGIF2-C20orf24A0A0A6YYL0 155 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 TRBV9A0A0B4J1U6 114 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 MDFIC2A0A1B0GVS7 189 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 OR2T8A6NH00 312 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 RHOGP84095 191 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 HIST2H2BCQ6DN03 193 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 ZNF329Q86UD4 541 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 OCC1Q8TAD7 63 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 C2CD4CQ8TF44 421 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 ANAPC16Q96DE5 110 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 TXN2Q99757 166 aa15.63■□□□□ 0.09
RTN1-202ENST00000342503 HELTA6NFD8 242 aa15.62■□□□□ 0.09
RTN1-202ENST00000342503 C9JCJ5 164 aa15.62■□□□□ 0.09
RTN1-202ENST00000342503 H7BYZ3 331 aa15.62■□□□□ 0.09
RTN1-202ENST00000342503 HNF1AP20823 631 aa15.62■□□□□ 0.09
RTN1-202ENST00000342503 FCGR2BP31994 310 aaPredicted RBP15.62■□□□□ 0.09
RTN1-202ENST00000342503 C15orf32Q32M92 178 aa15.62■□□□□ 0.09
RTN1-202ENST00000342503 TRAV41A0A0B4J266 112 aa15.61■□□□□ 0.09
RTN1-202ENST00000342503 H3BRN7 92 aa15.61■□□□□ 0.09
RTN1-202ENST00000342503 NBEAP1P0C6P0 100 aa15.61■□□□□ 0.09
RTN1-202ENST00000342503 CRIP2P52943 208 aaPredicted RBP15.61■□□□□ 0.09
RTN1-202ENST00000342503 FLI1Q01543 452 aaPredicted RBP15.61■□□□□ 0.09
RTN1-202ENST00000342503 C19orf54Q5BKX5 351 aa15.61■□□□□ 0.09
RTN1-202ENST00000342503 Q96MF0 132 aa15.61■□□□□ 0.09
RTN1-202ENST00000342503 SHANK2-AS3Q9BTD1 123 aa15.61■□□□□ 0.09
RTN1-202ENST00000342503 TMEM14CQ9P0S9 112 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms