RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TMEM155Q4W5P6 130 aa10.55□□□□□ -0.72
COL18A1-201ENST00000342220 NEU4Q8WWR8 484 aaPredicted RBP10.55□□□□□ -0.72
COL18A1-201ENST00000342220 IMMP2LQ96T52 175 aa10.55□□□□□ -0.72
COL18A1-201ENST00000342220 CLEC7AQ9BXN2 247 aa10.55□□□□□ -0.72
COL18A1-201ENST00000342220 TCF19Q9Y242 345 aa10.55□□□□□ -0.72
COL18A1-201ENST00000342220 RRHO14718 337 aa10.55□□□□□ -0.72
COL18A1-201ENST00000342220 IGLC2P0DOY2 106 aa10.55□□□□□ -0.72
COL18A1-201ENST00000342220 IGLC3P0DOY3 106 aa10.55□□□□□ -0.72
COL18A1-201ENST00000342220 EFNA4P52798 201 aa10.55□□□□□ -0.72
COL18A1-201ENST00000342220 PRRX1P54821 245 aa10.55□□□□□ -0.72
COL18A1-201ENST00000342220 MEF2CQ06413 473 aaPredicted RBP10.55□□□□□ -0.72
COL18A1-201ENST00000342220 SLC25A48Q6ZT89 311 aaKnown RBP10.55□□□□□ -0.72
COL18A1-201ENST00000342220 ATOH7Q8N100 152 aa10.55□□□□□ -0.72
COL18A1-201ENST00000342220 Q8N7P7 452 aa10.55□□□□□ -0.72
COL18A1-201ENST00000342220 SAP30O75446 220 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 SERF1AO75920 110 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 IGHV4-39P01824 125 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 IL3RAP26951 378 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 ATP5G3P48201 142 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 PPOXP50336 477 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 KCNIP4Q6PIL6 250 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 BAGE3Q86Y29 109 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 BAGE2Q86Y30 109 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 FAM168AQ92567 244 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 PLEKHA3Q9HB20 300 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 C17orf112F2Z3M2 114 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 DERL1Q9BUN8 251 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 WNT10AQ9GZT5 417 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 CGB3P0DN86 165 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 CGB7P0DN87 165 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 ANAPC16Q96DE5 110 aa10.54□□□□□ -0.72
COL18A1-201ENST00000342220 PGPEP1LA6NFU8 196 aa10.53□□□□□ -0.72
COL18A1-201ENST00000342220 TIMM23O14925 209 aa10.53□□□□□ -0.72
COL18A1-201ENST00000342220 GATA2P23769 480 aaPredicted RBP10.53□□□□□ -0.72
COL18A1-201ENST00000342220 CD1BP29016 333 aa10.53□□□□□ -0.72
COL18A1-201ENST00000342220 ADMP35318 185 aa10.53□□□□□ -0.72
COL18A1-201ENST00000342220 PAFAH1B2P68402 229 aa10.53□□□□□ -0.72
COL18A1-201ENST00000342220 NIT1Q86X76 327 aa10.53□□□□□ -0.72
COL18A1-201ENST00000342220 TMEM204Q9BSN7 226 aa10.53□□□□□ -0.72
COL18A1-201ENST00000342220 SELENOKQ9Y6D0 94 aa10.53□□□□□ -0.72
COL18A1-201ENST00000342220 GNG7O60262 68 aa10.53□□□□□ -0.72
COL18A1-201ENST00000342220 FBXL7Q9UJT9 491 aa10.53□□□□□ -0.72
COL18A1-201ENST00000342220 RNF114Q9Y508 228 aa10.53□□□□□ -0.72
COL18A1-201ENST00000342220 WDR83OSQ9Y284 106 aa10.52□□□□□ -0.72
COL18A1-201ENST00000342220 ITPR3Q14573 2671 aa10.52□□□□□ -0.72
COL18A1-201ENST00000342220 FLNAP21333 2647 aaKnown RBP10.52□□□□□ -0.73
COL18A1-201ENST00000342220 NDUFB4O95168 129 aa10.52□□□□□ -0.73
COL18A1-201ENST00000342220 HTR1DP28221 377 aa10.52□□□□□ -0.73
COL18A1-201ENST00000342220 TSPOP30536 169 aa10.52□□□□□ -0.73
COL18A1-201ENST00000342220 COMPP49747 757 aaPredicted RBP10.52□□□□□ -0.73
COL18A1-201ENST00000342220 KRTAP10-9P60411 292 aa10.52□□□□□ -0.73
COL18A1-201ENST00000342220 PDLIM3Q53GG5 364 aaPredicted RBP10.52□□□□□ -0.73
COL18A1-201ENST00000342220 SIGLECL1Q8N7X8 197 aa10.52□□□□□ -0.73
COL18A1-201ENST00000342220 ZNF586Q9NXT0 402 aa10.52□□□□□ -0.73
COL18A1-201ENST00000342220 RUSC1-AS1Q66K80 236 aa10.52□□□□□ -0.73
COL18A1-201ENST00000342220 ZNF841Q6ZN19 808 aa10.52□□□□□ -0.73
COL18A1-201ENST00000342220 VMO1Q7Z5L0 202 aa10.52□□□□□ -0.73
COL18A1-201ENST00000342220 TCTEX1D1Q8N7M0 179 aa10.52□□□□□ -0.73
COL18A1-201ENST00000342220 ZNF114Q8NC26 417 aa10.52□□□□□ -0.73
COL18A1-201ENST00000342220 ZNF355PQ9NSJ1 428 aa10.52□□□□□ -0.73
COL18A1-201ENST00000342220 IGHV4-61A0A0C4DH41 118 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 A0A1W2PPV4 95 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 LY6EQ16553 131 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 AMMECR1LQ6DCA0 310 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 LINC00527Q9UJ94 153 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 TEX15Q9BXT5 2789 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 IGHV3-35A0A0C4DH35 117 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 TOX4O94842 621 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 VENTXO95231 258 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 SOX21Q9Y651 276 aaPredicted RBP10.51□□□□□ -0.73
COL18A1-201ENST00000342220 TET2Q6N021 2002 aaPredicted RBP10.51□□□□□ -0.73
COL18A1-201ENST00000342220 GCN1Q92616 2671 aaKnown RBP10.51□□□□□ -0.73
COL18A1-201ENST00000342220 IGHV4-30-2A0A087WSY4 118 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 GAGE12BA1L429 117 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 E7EUB6 86 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 F2Z2F3 143 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 H0YJW9 148 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 CA2P00918 260 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 CRISP2P16562 243 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 SRP14P37108 136 aaKnown RBP10.51□□□□□ -0.73
COL18A1-201ENST00000342220 RPL8P62917 257 aaKnown RBP10.51□□□□□ -0.73
COL18A1-201ENST00000342220 C11orf71Q6IPW1 123 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 NABP2Q9BQ15 211 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 WASHC3Q9Y3C0 194 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 PXMP4Q9Y6I8 212 aa10.51□□□□□ -0.73
COL18A1-201ENST00000342220 CORTO00230 105 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 NPY1RP25929 384 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 CTRLP40313 264 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 OPRK1P41145 380 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 RPL15P61313 204 aaKnown RBP10.5□□□□□ -0.73
COL18A1-201ENST00000342220 KLF17Q5JT82 389 aaPredicted RBP10.5□□□□□ -0.73
COL18A1-201ENST00000342220 WDR73Q6P4I2 378 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 TREML4Q6UXN2 200 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 OR2T8A6NH00 312 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 SMAD7O15105 426 aaKnown RBP10.5□□□□□ -0.73
COL18A1-201ENST00000342220 RELBQ01201 579 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 HLA-DRB5Q30154 266 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 SAMD13Q5VXD3 122 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 MIC13Q5XKP0 118 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 TMEM219Q86XT9 240 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms