RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 FBXL15Q9H469 300 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 CDC42EP3Q9UKI2 254 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 GRIFINA4D1Z8 144 aa11.94□□□□□ -0.5
TPM3-208ENST00000341485 ORM2P19652 201 aa11.94□□□□□ -0.5
TPM3-208ENST00000341485 IER3P46695 156 aa11.94□□□□□ -0.5
TPM3-208ENST00000341485 PKIAP61925 76 aa11.94□□□□□ -0.5
TPM3-208ENST00000341485 LDLRAD2Q5SZI1 272 aa11.94□□□□□ -0.5
TPM3-208ENST00000341485 TMEM116Q8NCL8 245 aa11.94□□□□□ -0.5
TPM3-208ENST00000341485 OR1B1Q8NGR6 318 aa11.94□□□□□ -0.5
TPM3-208ENST00000341485 NRGNQ92686 78 aa11.94□□□□□ -0.5
TPM3-208ENST00000341485 NDUFS8O00217 210 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 SNRPCP09234 159 aaKnown RBP11.93□□□□□ -0.5
TPM3-208ENST00000341485 PLA2G2AP14555 144 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 LMO4P61968 165 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 SSX2Q16385 188 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 LHFPL4Q7Z7J7 247 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 NHLRC2Q8NBF2 726 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 TP53TG3Q9ULZ0 132 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 F11RQ9Y624 299 aaKnown RBP11.93□□□□□ -0.5
TPM3-208ENST00000341485 J3QKU1 62 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 FCN1O00602 326 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 PEX7O00628 323 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 COL8A1P27658 744 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 CX3CL1P78423 397 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 PAX2Q02962 417 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 IBA57Q5T440 356 aaKnown RBP11.93□□□□□ -0.5
TPM3-208ENST00000341485 KIR3DL3Q8N743 410 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 C10orf105Q8TEF2 133 aa11.93□□□□□ -0.5
TPM3-208ENST00000341485 SNURFLB1AK76 121 aa11.92□□□□□ -0.5
TPM3-208ENST00000341485 PRTN3P24158 256 aa11.92□□□□□ -0.5
TPM3-208ENST00000341485 MYCNOSP40205 109 aa11.92□□□□□ -0.5
TPM3-208ENST00000341485 TCL1AP56279 114 aa11.92□□□□□ -0.5
TPM3-208ENST00000341485 C22orf15Q8WYQ4 148 aa11.92□□□□□ -0.5
TPM3-208ENST00000341485 GSX1Q9H4S2 264 aaPredicted RBP11.92□□□□□ -0.5
TPM3-208ENST00000341485 TRAV34A0A0B4J273 112 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 IGHV2-70DA0A0C4DH43 119 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 CORTO00230 105 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 SPINK4O60575 86 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 LINC00310P59036 64 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 GNG5P63218 68 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 VMO1Q7Z5L0 202 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 SRSF12Q8WXF0 261 aaKnown RBP11.91□□□□□ -0.5
TPM3-208ENST00000341485 GNB1LQ9BYB4 327 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 USP9XQ93008 2570 aaPredicted RBP11.91□□□□□ -0.5
TPM3-208ENST00000341485 TRBV9A0A0B4J1U6 114 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 SMIM27A0A1W2PRY6 76 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 TIMM23O14925 209 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 KLRD1Q13241 179 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 TPTE2P1Q5T6R2 138 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 ASPHD1Q5U4P2 390 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 C1orf122Q6ZSJ8 110 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 RNF5Q99942 180 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 SERTAD4Q9NUC0 356 aa11.91□□□□□ -0.5
TPM3-208ENST00000341485 ZNF705GA8MUZ8 300 aaPredicted RBP11.9□□□□□ -0.5
TPM3-208ENST00000341485 TSTD3H0UI37 97 aa11.9□□□□□ -0.5
TPM3-208ENST00000341485 HYPMO75409 117 aa11.9□□□□□ -0.5
TPM3-208ENST00000341485 CRISP2P16562 243 aa11.9□□□□□ -0.5
TPM3-208ENST00000341485 RANP62826 216 aaKnown RBP11.9□□□□□ -0.5
TPM3-208ENST00000341485 SLC35B1P78383 322 aa11.9□□□□□ -0.5
TPM3-208ENST00000341485 OR11H6Q8NGC7 330 aa11.9□□□□□ -0.5
TPM3-208ENST00000341485 BLNKQ8WV28 456 aa11.9□□□□□ -0.5
TPM3-208ENST00000341485 ARHGAP32A7KAX9 2087 aa11.9□□□□□ -0.5
TPM3-208ENST00000341485 PAX1P15863 534 aa11.9□□□□□ -0.51
TPM3-208ENST00000341485 HTR1DP28221 377 aa11.9□□□□□ -0.51
TPM3-208ENST00000341485 PLP1P60201 277 aa11.9□□□□□ -0.51
TPM3-208ENST00000341485 DEFA6Q01524 100 aa11.9□□□□□ -0.51
TPM3-208ENST00000341485 PLGLAQ15195 96 aa11.9□□□□□ -0.51
TPM3-208ENST00000341485 TMEM136Q6ZRR5 245 aa11.9□□□□□ -0.51
TPM3-208ENST00000341485 BAGE2Q86Y30 109 aa11.9□□□□□ -0.51
TPM3-208ENST00000341485 ZNF664Q8N3J9 261 aa11.9□□□□□ -0.51
TPM3-208ENST00000341485 STXBP6Q8NFX7 210 aa11.9□□□□□ -0.51
TPM3-208ENST00000341485 CMTM2Q8TAZ6 248 aa11.9□□□□□ -0.51
TPM3-208ENST00000341485 LPAR2Q9HBW0 351 aa11.9□□□□□ -0.51
TPM3-208ENST00000341485 IGHV4-61A0A0C4DH41 118 aa11.89□□□□□ -0.51
TPM3-208ENST00000341485 CA1P00915 261 aaPredicted RBP11.89□□□□□ -0.51
TPM3-208ENST00000341485 DDTP30046 118 aa11.89□□□□□ -0.51
TPM3-208ENST00000341485 EPDR1Q9UM22 224 aa11.89□□□□□ -0.51
TPM3-208ENST00000341485 IGHV4-30-2A0A087WSY4 118 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 A0A1W2PRD5 423 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 A0A1W2PRF3 423 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 A0A1W2PRM7 423 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 VWC2LB2RUY7 222 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 F2Z2F3 143 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 I3L2K1 104 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 TOX4O94842 621 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 SLC25A5P05141 298 aaKnown RBP11.88□□□□□ -0.51
TPM3-208ENST00000341485 IGLC1P0CG04 106 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 GP9P14770 177 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 CEACAM3P40198 252 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 DSCR9P59020 149 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 WDR73Q6P4I2 378 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 FAM231DQ6ZW35 169 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 MBD6Q96DN6 1003 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 C14orf144Q96I85 54 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 SIRPDQ9H106 197 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 DPM3Q9P2X0 92 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 NAT8BQ9UHF3 227 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 SPTAN1Q13813 2472 aaKnown RBP11.88□□□□□ -0.51
TPM3-208ENST00000341485 AKAP6Q13023 2319 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 MYO18BQ8IUG5 2567 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms