RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 EEF1AKMT3Q96AZ1 226 aa13.56□□□□□ -0.24
CLDN4-201ENST00000340958 OR5G3P0C626 314 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 RD3LP0DJH9 198 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 PF4V1P10720 104 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 ORM2P19652 201 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 TPPP2P59282 170 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 CCL20P78556 96 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 SPSB3Q6PJ21 355 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 OR1B1Q8NGR6 318 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 PFDN5Q99471 154 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 C19orf24Q9BVV8 132 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 TRBV9A0A0B4J1U6 114 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 TRAV1-1A0A0B4J248 108 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 OR2T8A6NH00 312 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 SEC14L6B5MCN3 397 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 TMEM95Q3KNT9 176 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 C10orf91Q5T1B1 145 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 C10orf113Q5VZT2 155 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 TMEM231Q9H6L2 316 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 SEPSECSQ9HD40 501 aaKnown RBP13.55□□□□□ -0.24
CLDN4-201ENST00000340958 DNAJC4Q9NNZ3 241 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 GNG13Q9P2W3 67 aa13.55□□□□□ -0.24
CLDN4-201ENST00000340958 FAM223BA6NKX1 122 aa13.54□□□□□ -0.24
CLDN4-201ENST00000340958 GUK1Q16774 197 aa13.54□□□□□ -0.24
CLDN4-201ENST00000340958 C19orf54Q5BKX5 351 aa13.54□□□□□ -0.24
CLDN4-201ENST00000340958 FAM223AQ8IWN6 122 aa13.54□□□□□ -0.24
CLDN4-201ENST00000340958 GATAD1Q8WUU5 269 aa13.54□□□□□ -0.24
CLDN4-201ENST00000340958 TXN2Q99757 166 aa13.54□□□□□ -0.24
CLDN4-201ENST00000340958 GAR1Q9NY12 217 aaKnown RBP13.54□□□□□ -0.24
CLDN4-201ENST00000340958 DNAJC9-AS1A6NH13 148 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 H3BUA1 57 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 IFNA1P01562 189 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 PSG1P11464 419 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 LYZP61626 148 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 PEA15Q15121 130 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 HAGHQ16775 308 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 RNF2Q99496 336 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 GNB4Q9HAV0 340 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 ELOA3CA0A087WX78 387 aaPredicted RBP13.53□□□□□ -0.24
CLDN4-201ENST00000340958 HYPMO75409 117 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 ADCYAP1P18509 176 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 PPIFP30405 207 aaKnown RBP13.53□□□□□ -0.24
CLDN4-201ENST00000340958 GPR183P32249 361 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 PRIMA1Q86XR5 153 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 Q8WTZ3 238 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 FUT9Q9Y231 359 aa13.53□□□□□ -0.24
CLDN4-201ENST00000340958 TRBV7-1A0A0A6YYK4 115 aa13.52□□□□□ -0.25
CLDN4-201ENST00000340958 RBFOX3A6NFN3 312 aa13.52□□□□□ -0.25
CLDN4-201ENST00000340958 CXorf1O96002 111 aa13.52□□□□□ -0.25
CLDN4-201ENST00000340958 IGKV1-17P01599 117 aa13.52□□□□□ -0.25
CLDN4-201ENST00000340958 CLEC3BP05452 202 aa13.52□□□□□ -0.25
CLDN4-201ENST00000340958 TAS2R45P59539 299 aa13.52□□□□□ -0.25
CLDN4-201ENST00000340958 SLC35B1P78383 322 aa13.52□□□□□ -0.25
CLDN4-201ENST00000340958 SRSF3P84103 164 aaKnown RBP13.52□□□□□ -0.25
CLDN4-201ENST00000340958 SPATA31B1PQ5VZV4 182 aa13.52□□□□□ -0.25
CLDN4-201ENST00000340958 MIR17HGQ75NE6 70 aa13.52□□□□□ -0.25
CLDN4-201ENST00000340958 ZNF418Q8TF45 676 aaPredicted RBP13.52□□□□□ -0.25
CLDN4-201ENST00000340958 TMEM37Q8WXS4 190 aa13.52□□□□□ -0.25
CLDN4-201ENST00000340958 TECRQ9NZ01 308 aaKnown RBP13.52□□□□□ -0.25
CLDN4-201ENST00000340958 CARHSP1Q9Y2V2 147 aaKnown RBP13.52□□□□□ -0.25
CLDN4-201ENST00000340958 KLK9Q2XQG4 91 aa13.51□□□□□ -0.25
CLDN4-201ENST00000340958 CLEC19AQ6UXS0 136 aa13.51□□□□□ -0.25
CLDN4-201ENST00000340958 ZNF329Q86UD4 541 aa13.51□□□□□ -0.25
CLDN4-201ENST00000340958 SVBPQ8N300 66 aa13.51□□□□□ -0.25
CLDN4-201ENST00000340958 OR51G1Q8NGK1 321 aa13.51□□□□□ -0.25
CLDN4-201ENST00000340958 ZNF502Q8TBZ5 544 aa13.51□□□□□ -0.25
CLDN4-201ENST00000340958 MRPL32Q9BYC8 188 aaKnown RBP13.51□□□□□ -0.25
CLDN4-201ENST00000340958 TMPRSS5Q9H3S3 457 aa13.51□□□□□ -0.25
CLDN4-201ENST00000340958 ZNF702PQ9H963 129 aa13.51□□□□□ -0.25
CLDN4-201ENST00000340958 KLK9Q9UKQ9 250 aa13.51□□□□□ -0.25
CLDN4-201ENST00000340958 TOMM40O96008 361 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 CRYBA1P05813 215 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 ARL14EPLP0DKL9 152 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 LINC00305Q7Z4B0 112 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 USMG5Q96IX5 58 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 ZNF580Q9UK33 172 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 A0A0G2JLM5 398 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 OR7C2O60412 319 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 IL4P05112 153 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 STAG3L2P0CL84 134 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 STAG3L3P0CL85 134 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 FCGR2BP31994 310 aaPredicted RBP13.5□□□□□ -0.25
CLDN4-201ENST00000340958 YPEL3P61236 119 aaPredicted RBP13.5□□□□□ -0.25
CLDN4-201ENST00000340958 GUCA2BQ16661 112 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 UHRF2Q96PU4 802 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 RARRES2Q99969 163 aa13.5□□□□□ -0.25
CLDN4-201ENST00000340958 FAM181BA6NEQ2 426 aa13.49□□□□□ -0.25
CLDN4-201ENST00000340958 F8W735 103 aaPredicted RBP13.49□□□□□ -0.25
CLDN4-201ENST00000340958 FLI1Q01543 452 aaPredicted RBP13.49□□□□□ -0.25
CLDN4-201ENST00000340958 KHDC3LQ587J8 217 aa13.49□□□□□ -0.25
CLDN4-201ENST00000340958 HIGD1AQ9Y241 93 aa13.49□□□□□ -0.25
CLDN4-201ENST00000340958 PSMB11A5LHX3 300 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 CTSGP08311 255 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 C8orf88P0DMB2 117 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 PSMB3P49720 205 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 PPT1P50897 306 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 RAB9AP51151 201 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 RXFP4Q8TDU9 374 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 RNF125Q96EQ8 232 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 KLK15Q9H2R5 256 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms