RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 COL8A1P27658 744 aa12.26□□□□□ -0.45
BRAT1-201ENST00000340611 SIGMAR1Q99720 223 aa12.26□□□□□ -0.45
BRAT1-201ENST00000340611 ADH4P08319 380 aa12.25□□□□□ -0.45
BRAT1-201ENST00000340611 Q8TCH9 128 aa12.25□□□□□ -0.45
BRAT1-201ENST00000340611 QTRT1Q9BXR0 403 aaKnown RBP12.25□□□□□ -0.45
BRAT1-201ENST00000340611 HBZP02008 142 aa12.25□□□□□ -0.45
BRAT1-201ENST00000340611 LINC00205P59089 165 aa12.25□□□□□ -0.45
BRAT1-201ENST00000340611 RPL30P62888 115 aaKnown RBP12.25□□□□□ -0.45
BRAT1-201ENST00000340611 PRB3Q04118 309 aaPredicted RBP12.25□□□□□ -0.45
BRAT1-201ENST00000340611 MEF2CQ06413 473 aaPredicted RBP12.25□□□□□ -0.45
BRAT1-201ENST00000340611 TMEM95Q3KNT9 176 aa12.25□□□□□ -0.45
BRAT1-201ENST00000340611 NRGNQ92686 78 aa12.25□□□□□ -0.45
BRAT1-201ENST00000340611 PIGBOS1A0A0B4J2F0 54 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 LRRC30A6NM36 301 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 M0R2Z0 102 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 APOA2P02652 100 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 IGFBP2P18065 325 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 FOXE3Q13461 319 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 SMPXQ9UHP9 88 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 TRBV6-6A0A0A6YYG2 114 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 H3BUT2 72 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 TNXAQ16473 311 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 FAM222BQ8WU58 562 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 RAB37Q96AX2 223 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 PERPQ96FX8 193 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 CHODLQ9H9P2 273 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 MBNL3Q9NUK0 354 aaKnown RBP12.24□□□□□ -0.45
BRAT1-201ENST00000340611 IL36BQ9NZH7 164 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 CTSZQ9UBR2 303 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 OR51B2Q9Y5P1 312 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 PMS2P5A8MQ11 134 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 H0YJW9 148 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 HSBP1O75506 76 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 DLX1P56177 255 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 MMD2Q8IY49 270 aa12.24□□□□□ -0.45
BRAT1-201ENST00000340611 TIMM8BQ9Y5J9 83 aaPredicted RBP12.24□□□□□ -0.45
BRAT1-201ENST00000340611 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.23□□□□□ -0.45
BRAT1-201ENST00000340611 SCO2A0A1W2PP80 73 aa12.23□□□□□ -0.45
BRAT1-201ENST00000340611 ASPHD1Q5U4P2 390 aa12.23□□□□□ -0.45
BRAT1-201ENST00000340611 SLC35E4Q6ICL7 350 aa12.23□□□□□ -0.45
BRAT1-201ENST00000340611 GCN1Q92616 2671 aaKnown RBP12.23□□□□□ -0.45
BRAT1-201ENST00000340611 FXYD3Q14802 87 aa12.23□□□□□ -0.45
BRAT1-201ENST00000340611 C11orf71Q6IPW1 123 aa12.23□□□□□ -0.45
BRAT1-201ENST00000340611 RNASEKQ6P5S7 137 aaKnown RBP12.23□□□□□ -0.45
BRAT1-201ENST00000340611 SHISA2Q6UWI4 295 aa12.23□□□□□ -0.45
BRAT1-201ENST00000340611 C19orf35Q6ZS72 473 aa12.23□□□□□ -0.45
BRAT1-201ENST00000340611 OR2D2Q9H210 308 aa12.23□□□□□ -0.45
BRAT1-201ENST00000340611 OR4C46A6NHA9 309 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 CD5LO43866 347 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 LGALS4P56470 323 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 SLC25A34Q6PIV7 304 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 C12orf54Q6X4T0 127 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 GTF2H5Q6ZYL4 71 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 H1FXQ92522 213 aaKnown RBP12.22□□□□□ -0.45
BRAT1-201ENST00000340611 JMJD8Q96S16 334 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 KCNIP1Q9NZI2 227 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 ZNRD1Q9P1U0 126 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 FAM181BA6NEQ2 426 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 SH2D7A6NKC9 451 aaPredicted RBP12.22□□□□□ -0.45
BRAT1-201ENST00000340611 C17orf98A8MV24 154 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 FAM90A26D6RGX4 464 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 MGST3O14880 152 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 UBE2G1P62253 170 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 TEX36Q5VZQ5 186 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 OR4P4Q8NGL7 312 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 C5orf30Q96GV9 206 aa12.22□□□□□ -0.45
BRAT1-201ENST00000340611 RPEL1Q2QD12 228 aa12.21□□□□□ -0.45
BRAT1-201ENST00000340611 OR2T6Q8NHC8 308 aa12.21□□□□□ -0.45
BRAT1-201ENST00000340611 NINJ1Q92982 152 aa12.21□□□□□ -0.45
BRAT1-201ENST00000340611 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.21□□□□□ -0.45
BRAT1-201ENST00000340611 ANKRD17O75179 2603 aaKnown RBP12.21□□□□□ -0.45
BRAT1-201ENST00000340611 ZFHX3Q15911 3703 aa12.21□□□□□ -0.45
BRAT1-201ENST00000340611 USF1P22415 310 aaPredicted RBP12.21□□□□□ -0.45
BRAT1-201ENST00000340611 TCTAP57738 103 aa12.21□□□□□ -0.45
BRAT1-201ENST00000340611 OR8B2Q96RD0 313 aa12.21□□□□□ -0.45
BRAT1-201ENST00000340611 PMCHL2Q9BQD1 86 aa12.21□□□□□ -0.45
BRAT1-201ENST00000340611 SLC25A10Q9UBX3 287 aaPredicted RBP12.21□□□□□ -0.45
BRAT1-201ENST00000340611 HILPDAQ9Y5L2 63 aa12.21□□□□□ -0.45
BRAT1-201ENST00000340611 TSSC4Q9Y5U2 329 aaPredicted RBP12.21□□□□□ -0.45
BRAT1-201ENST00000340611 TEX48A0A1B0GUV7 120 aa12.21□□□□□ -0.46
BRAT1-201ENST00000340611 A0A1W2PPV4 95 aa12.21□□□□□ -0.46
BRAT1-201ENST00000340611 K7EN84 100 aa12.21□□□□□ -0.46
BRAT1-201ENST00000340611 BMPR1BO00238 502 aa12.21□□□□□ -0.46
BRAT1-201ENST00000340611 PDE6DO43924 150 aa12.21□□□□□ -0.46
BRAT1-201ENST00000340611 CCL3L1P16619 93 aa12.21□□□□□ -0.46
BRAT1-201ENST00000340611 TMEM177Q53S58 311 aa12.21□□□□□ -0.46
BRAT1-201ENST00000340611 GALMQ96C23 342 aa12.21□□□□□ -0.46
BRAT1-201ENST00000340611 NPIPB11E5RHQ5 1161 aa12.2□□□□□ -0.46
BRAT1-201ENST00000340611 K7EQM0 130 aa12.2□□□□□ -0.46
BRAT1-201ENST00000340611 C15orf65H3BRN8 121 aa12.2□□□□□ -0.46
BRAT1-201ENST00000340611 FAM216AQ8WUB2 273 aa12.2□□□□□ -0.46
BRAT1-201ENST00000340611 ARL14EPLP0DKL9 152 aa12.19□□□□□ -0.46
BRAT1-201ENST00000340611 BRWD1-AS2P59051 145 aa12.19□□□□□ -0.46
BRAT1-201ENST00000340611 OR10J3Q5JRS4 329 aa12.19□□□□□ -0.46
BRAT1-201ENST00000340611 Q8N7P7 452 aa12.19□□□□□ -0.46
BRAT1-201ENST00000340611 SS18L2Q9UHA2 77 aa12.19□□□□□ -0.46
BRAT1-201ENST00000340611 RAB1BQ9H0U4 201 aa12.19□□□□□ -0.46
BRAT1-201ENST00000340611 FASNP49327 2511 aaKnown RBP12.19□□□□□ -0.46
BRAT1-201ENST00000340611 C17orf58Q2M2W7 97 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 UFSP1Q6NVU6 142 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms