RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 LSM4Q9Y4Z0 139 aaKnown RBP10.74□□□□□ -0.69
CTSL-201ENST00000340342 COL7A1Q02388 2944 aa10.73□□□□□ -0.69
CTSL-201ENST00000340342 IGKV1D-37A0A075B6S9 117 aa10.73□□□□□ -0.69
CTSL-201ENST00000340342 IGKV1OR2-108A0A075B7D4 117 aa10.73□□□□□ -0.69
CTSL-201ENST00000340342 IGHV3OR16-13A0A075B7E8 117 aa10.73□□□□□ -0.69
CTSL-201ENST00000340342 IGHV3-74A0A0B4J1X5 117 aa10.73□□□□□ -0.69
CTSL-201ENST00000340342 SCGB2A1O75556 95 aa10.73□□□□□ -0.69
CTSL-201ENST00000340342 C8orf88P0DMB2 117 aa10.73□□□□□ -0.69
CTSL-201ENST00000340342 LGALSLQ3ZCW2 172 aaPredicted RBP10.73□□□□□ -0.69
CTSL-201ENST00000340342 C9orf62Q8N4C0 152 aa10.73□□□□□ -0.69
CTSL-201ENST00000340342 INO80EQ8NBZ0 244 aaPredicted RBP10.73□□□□□ -0.69
CTSL-201ENST00000340342 MFFQ9GZY8 342 aa10.73□□□□□ -0.69
CTSL-201ENST00000340342 MRPL27Q9P0M9 148 aaKnown RBP10.73□□□□□ -0.69
CTSL-201ENST00000340342 ZFP92A6NM28 416 aa10.72□□□□□ -0.69
CTSL-201ENST00000340342 K7EMT4 169 aa10.72□□□□□ -0.69
CTSL-201ENST00000340342 GP9P14770 177 aa10.72□□□□□ -0.69
CTSL-201ENST00000340342 CXCL2P19875 107 aa10.72□□□□□ -0.69
CTSL-201ENST00000340342 CAV2P51636 162 aa10.72□□□□□ -0.69
CTSL-201ENST00000340342 ZNF90Q03938 601 aa10.72□□□□□ -0.69
CTSL-201ENST00000340342 ARL16Q0P5N6 197 aa10.72□□□□□ -0.69
CTSL-201ENST00000340342 LCN12Q6JVE5 192 aa10.72□□□□□ -0.69
CTSL-201ENST00000340342 IGHV7-4-1A0A0J9YVY3 117 aa10.71□□□□□ -0.69
CTSL-201ENST00000340342 SMCO3A2RU48 225 aa10.71□□□□□ -0.69
CTSL-201ENST00000340342 FAM24AA6NFZ4 105 aa10.71□□□□□ -0.69
CTSL-201ENST00000340342 SCAF4O95104 1147 aaKnown RBP10.71□□□□□ -0.69
CTSL-201ENST00000340342 APOHP02749 345 aaPredicted RBP10.71□□□□□ -0.69
CTSL-201ENST00000340342 RPL12P30050 165 aaKnown RBP10.71□□□□□ -0.69
CTSL-201ENST00000340342 YPEL3P61236 119 aaPredicted RBP10.71□□□□□ -0.69
CTSL-201ENST00000340342 AKR1C1Q04828 323 aa10.71□□□□□ -0.69
CTSL-201ENST00000340342 OR2F1Q13607 317 aa10.71□□□□□ -0.69
CTSL-201ENST00000340342 LAMTOR1Q6IAA8 161 aa10.71□□□□□ -0.69
CTSL-201ENST00000340342 TMEM61Q8N0U2 210 aa10.71□□□□□ -0.69
CTSL-201ENST00000340342 MARC2Q969Z3 335 aa10.71□□□□□ -0.69
CTSL-201ENST00000340342 AQP10Q96PS8 301 aa10.71□□□□□ -0.69
CTSL-201ENST00000340342 LYRM2Q9NU23 88 aaPredicted RBP10.71□□□□□ -0.69
CTSL-201ENST00000340342 TECRQ9NZ01 308 aaKnown RBP10.71□□□□□ -0.69
CTSL-201ENST00000340342 DNAH9Q9NYC9 4486 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 IGHV3-66A0A0C4DH42 116 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 A0A0D9SG52 128 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 IGSF23A1L1A6 192 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 RNF222A6NCQ9 220 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 CST7O76096 145 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 TOMM40O96008 361 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 IL4P05112 153 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 RD3LP0DJH9 198 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 PSG1P11464 419 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 ZNF345Q14585 488 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 KCNRGQ8N5I3 272 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 THAP8Q8NA92 274 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 OR10P1Q8NGE3 313 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 B9D2Q9BPU9 175 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 GINS3Q9BRX5 216 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 SLC25A31Q9H0C2 315 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 SMPXQ9UHP9 88 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 HSPB11Q9Y547 144 aa10.7□□□□□ -0.7
CTSL-201ENST00000340342 ZNF785A8K8V0 405 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 CHEK1O14757 476 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 AP2S1P53680 142 aaPredicted RBP10.69□□□□□ -0.7
CTSL-201ENST00000340342 DLK1P80370 383 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 USF2Q15853 346 aaPredicted RBP10.69□□□□□ -0.7
CTSL-201ENST00000340342 GUCA2BQ16661 112 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 TMUB2Q71RG4 321 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 TMEM252Q8N6L7 170 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 TMEM217Q8N7C4 229 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 OR2K2Q8NGT1 345 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 Q8WTZ3 238 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 ST8SIA2Q92186 375 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 RNF2Q99496 336 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 RHPN1-AS1Q9BWJ2 59 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 SMAD5-AS1Q9Y6J3 95 aa10.69□□□□□ -0.7
CTSL-201ENST00000340342 C4BPBP20851 252 aa10.68□□□□□ -0.7
CTSL-201ENST00000340342 S100A11P31949 105 aa10.68□□□□□ -0.7
CTSL-201ENST00000340342 EWSR1Q01844 656 aaKnown RBP eCLIP10.68□□□□□ -0.7
CTSL-201ENST00000340342 LILRB2Q8N423 598 aa10.68□□□□□ -0.7
CTSL-201ENST00000340342 OR51G1Q8NGK1 321 aa10.68□□□□□ -0.7
CTSL-201ENST00000340342 METTL26Q96S19 204 aa10.68□□□□□ -0.7
CTSL-201ENST00000340342 TRGV9Q99603 122 aa10.68□□□□□ -0.7
CTSL-201ENST00000340342 NPPCP23582 126 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 GATA2P23769 480 aaPredicted RBP10.67□□□□□ -0.7
CTSL-201ENST00000340342 CRYBB3P26998 211 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 SLC38A11Q08AI6 406 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 OPCMLQ14982 345 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 TMEM182Q6ZP80 229 aaPredicted RBP10.67□□□□□ -0.7
CTSL-201ENST00000340342 RBPMS2Q6ZRY4 209 aaKnown RBP10.67□□□□□ -0.7
CTSL-201ENST00000340342 TMEM144Q7Z5S9 345 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 STX12Q86Y82 276 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 PBDC1Q9BVG4 233 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 ARL6Q9H0F7 186 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 BOLA1Q9Y3E2 137 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 SULT1A1P50225 295 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 LYZP61626 148 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 NHLH2Q02577 135 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 BAXQ07812 192 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 Q8N1Y9 231 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 RNF125Q96EQ8 232 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 VSIRQ9H7M9 311 aa10.67□□□□□ -0.7
CTSL-201ENST00000340342 IGKV3-7A0A075B6H7 116 aa10.66□□□□□ -0.7
CTSL-201ENST00000340342 KANTRA0A1W2PQU2 76 aa10.66□□□□□ -0.7
CTSL-201ENST00000340342 BCL2L11O43521 198 aa10.66□□□□□ -0.7
CTSL-201ENST00000340342 CD7P09564 240 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms