RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 TMEM68Q96MH6 324 aa8.51□□□□□ -1.05
TRAF3IP2-201ENST00000340026 TBL2Q9Y4P3 447 aaKnown RBP8.51□□□□□ -1.05
TRAF3IP2-201ENST00000340026 IZUMO1RA6ND01 250 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 SLC17A3O00476 420 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 TOMM40O96008 361 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 HLA-DQA1P01909 254 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 FCGR2BP31994 310 aaPredicted RBP8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 CLEC12BQ2HXU8 276 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 C5orf64Q2M2E5 130 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 PDZD11Q5EBL8 140 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 RUSC1-AS1Q66K80 236 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 ZNF562Q6V9R5 426 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 ATP5L2Q7Z4Y8 100 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 GRAMD2BQ96HH9 432 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 MRPL18Q9H0U6 180 aaKnown RBP8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 HIGD1AQ9Y241 93 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 RANP62826 216 aaKnown RBP8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 OR5I1Q13606 314 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 TMEM136Q6ZRR5 245 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 WNT10AQ9GZT5 417 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 OTORQ9NRC9 128 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 FAM231BA6NCW3 169 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 GATCO43716 136 aaKnown RBP8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 AMY1AP04745 511 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 HIST1H1EP10412 219 aaKnown RBP8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 TTC9CQ8N5M4 171 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 OR1B1Q8NGR6 318 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 GPR82Q96P67 336 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 PRSS22Q9GZN4 317 aa8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 SOX21Q9Y651 276 aaPredicted RBP8.5□□□□□ -1.05
TRAF3IP2-201ENST00000340026 FCN1O00602 326 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 LTAP01374 205 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 IGKV1-17P01599 117 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 PSG1P11464 419 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 MMDQ15546 238 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 BAGE2Q86Y30 109 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 OR8I2Q8N0Y5 310 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 NOL4LQ96MY1 436 aaPredicted RBP8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 GFRA4Q9GZZ7 299 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 RNASE7Q9H1E1 156 aaKnown RBP8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 POLR3KQ9Y2Y1 108 aaPredicted RBP8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 IGLV11-55A0A075B6I3 123 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 WI2-2373I1.2A0A1W2PRP0 233 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 RAB4BP61018 213 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 IQCJQ1A5X6 159 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 RASL11BQ9BPW5 248 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 SHANK2-AS3Q9BTD1 123 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 SIRPDQ9H106 197 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 TP53TG3Q9ULZ0 132 aa8.49□□□□□ -1.05
TRAF3IP2-201ENST00000340026 NPIPB6E9PJ23 425 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 H3BRN7 92 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 CRISP2P16562 243 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 ORM2P19652 201 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 HNF1AP20823 631 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 ARF6P62330 175 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 LURAP1LQ8IV03 231 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 TSKUQ8WUA8 353 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 SLC25A39Q9BZJ4 359 aaPredicted RBP8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 C19orf71A6NCJ1 209 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 SNURFLB1AK76 121 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 TSTD3H0UI37 97 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 CBLN1P23435 193 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 EFNA4P52798 201 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 CDPF1Q6NVV7 123 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 C16orf54Q6UWD8 224 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 ZNF600Q6ZNG1 722 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 TXN2Q99757 166 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 NAT8BQ9UHF3 227 aa8.48□□□□□ -1.05
TRAF3IP2-201ENST00000340026 TCRAP04437 139 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 DLX1P56177 255 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 LINC00310P59036 64 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 PDE6HQ13956 83 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 PLGLAQ15195 96 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 DMRTA1Q5VZB9 504 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 VMO1Q7Z5L0 202 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 KALRNO60229 2985 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 PGPA6NDG6 321 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 ZNF705GA8MUZ8 300 aaPredicted RBP8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 MRPS12O15235 138 aaKnown RBP8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 OR2J3O76001 311 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 RD3LP0DJH9 198 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 IGLC2P0DOY2 106 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 UBE2G1P62253 170 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 FXYD3Q14802 87 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 NUDT10Q8NFP7 164 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 SVIPQ8NHG7 77 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 CMTM2Q8TAZ6 248 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 NUDT11Q96G61 164 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 Q9H3A6 140 aa8.47□□□□□ -1.05
TRAF3IP2-201ENST00000340026 CNIH1O95406 144 aa8.46□□□□□ -1.05
TRAF3IP2-201ENST00000340026 SLC25A5P05141 298 aaKnown RBP8.46□□□□□ -1.05
TRAF3IP2-201ENST00000340026 IER3P46695 156 aa8.46□□□□□ -1.05
TRAF3IP2-201ENST00000340026 UBE2E1P51965 193 aa8.46□□□□□ -1.05
TRAF3IP2-201ENST00000340026 TPPP2P59282 170 aa8.46□□□□□ -1.05
TRAF3IP2-201ENST00000340026 ASPHD1Q5U4P2 390 aa8.46□□□□□ -1.05
TRAF3IP2-201ENST00000340026 ZNF491Q8N8L2 437 aa8.46□□□□□ -1.05
TRAF3IP2-201ENST00000340026 OR4B1Q8NGF8 309 aa8.46□□□□□ -1.05
TRAF3IP2-201ENST00000340026 FANCD2OSQ96PS1 177 aa8.46□□□□□ -1.05
TRAF3IP2-201ENST00000340026 IGHV2-70DA0A0C4DH43 119 aa8.46□□□□□ -1.06
TRAF3IP2-201ENST00000340026 SERTM2A0A1B0GWG4 89 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms