RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 AMELYQ99218 206 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 PARP14Q460N5 1801 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 IGHV1OR15-9A0A0B4J2B8 117 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 PEMTQ9UBM1 199 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 DTX4Q9Y2E6 619 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A10PA6NDY2 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A18PA6NE21 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A16PA6NEW6 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A20PA6NIJ5 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A8PA6NJQ4 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A7PA6NKC0 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A22PA8MWA6 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A12PA8MX19 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A5PA8MXJ8 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A23PA8MXZ1 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FOXH1O75593 365 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A15PP0C7V4 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A13PP0C7W8 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A14PP0C7W9 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 FAM90A24PP0C7X0 464 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 ATP6V0BQ99437 205 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 SPXQ9BT56 116 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 CREBBPQ92793 2442 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 BOD1L2Q8IYS8 172 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 RNF115Q9Y4L5 304 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 LHFPL6Q9Y693 200 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 NDUFC2O95298 119 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 ZIC1Q15915 447 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 RLFQ13129 1914 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 TRBV20-1A0A075B6N2 111 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 TRBV5-5A0A0J9YX44 114 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 ERCC8Q13216 396 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 HIST3H2BBQ8N257 126 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 SRSF8Q9BRL6 282 aaKnown RBP10.76□□□□□ -0.69
USP47-202ENST00000339865 TSSC4Q9Y5U2 329 aaPredicted RBP10.76□□□□□ -0.69
USP47-202ENST00000339865 TCF15Q12870 199 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 PLA2G2FQ9BZM2 168 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 FOXL2P58012 376 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 SAXO1Q8IYX7 474 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 RS1O15537 224 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 ZNF876PQ49A33 203 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 PRIMA1Q86XR5 153 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 IGKV1D-16P01601 117 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 PRR31Q5SQ13 230 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 C1orf194Q5T5A4 169 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 MORN5Q5VZ52 161 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 TMEM92Q6UXU6 159 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 SMPXQ9UHP9 88 aa10.76□□□□□ -0.69
USP47-202ENST00000339865 PRR33A8MZF0 331 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 MDS2Q8NDY4 140 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 ZNF721Q8TF20 911 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 MYOD1P15172 320 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 COX14Q96I36 57 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 OBSL1O75147 1896 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 KLF17Q5JT82 389 aaPredicted RBP10.75□□□□□ -0.69
USP47-202ENST00000339865 RPP25Q9BUL9 199 aaKnown RBP10.75□□□□□ -0.69
USP47-202ENST00000339865 OSTCQ9NRP0 149 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 LOC102723996A0A087X1L8 192 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 PYYP10082 97 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 AHRRA9YTQ3 701 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 RASL11AQ6T310 242 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 SS18L2Q9UHA2 77 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 TECTAO75443 2155 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 C17orf98A8MV24 154 aa10.75□□□□□ -0.69
USP47-202ENST00000339865 MCRIP2Q9BUT9 160 aaKnown RBP10.75□□□□□ -0.69
USP47-202ENST00000339865 C1orf159Q96HA4 380 aa10.74□□□□□ -0.69
USP47-202ENST00000339865 TRAV14DV4A0A0A6YYC5 116 aa10.74□□□□□ -0.69
USP47-202ENST00000339865 MMP23AO75900 390 aa10.74□□□□□ -0.69
USP47-202ENST00000339865 INAFM2P0DMQ5 153 aa10.74□□□□□ -0.69
USP47-202ENST00000339865 RPL34P49207 117 aaKnown RBP10.74□□□□□ -0.69
USP47-202ENST00000339865 PSG8Q9UQ74 426 aa10.74□□□□□ -0.69
USP47-202ENST00000339865 YBX2Q9Y2T7 364 aaKnown RBP10.74□□□□□ -0.69
USP47-202ENST00000339865 PLCH1Q4KWH8 1693 aa10.74□□□□□ -0.69
USP47-202ENST00000339865 CELA2AP08217 269 aa10.74□□□□□ -0.69
USP47-202ENST00000339865 TET2Q6N021 2002 aaPredicted RBP10.74□□□□□ -0.69
USP47-202ENST00000339865 OR13A1Q8NGR1 328 aa10.74□□□□□ -0.69
USP47-202ENST00000339865 RASL10AQ92737 203 aa10.74□□□□□ -0.69
USP47-202ENST00000339865 MBNL3Q9NUK0 354 aaKnown RBP10.74□□□□□ -0.69
USP47-202ENST00000339865 ALS2Q96Q42 1657 aa10.74□□□□□ -0.69
USP47-202ENST00000339865 A0A1W2PPI3 338 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 C1QAP02745 245 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 OR9G9P0C7N8 305 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 ZNF703Q9H7S9 590 aaPredicted RBP10.73□□□□□ -0.69
USP47-202ENST00000339865 CT83Q5H943 113 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 OSR1Q8TAX0 266 aaPredicted RBP10.73□□□□□ -0.69
USP47-202ENST00000339865 R3HDMLQ9H3Y0 253 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 ZNF319Q9P2F9 582 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 NRAPQ86VF7 1730 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 LOC285556D6RIA3 1793 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 C1orf53Q5VUE5 145 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 DPM3Q9P2X0 92 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 FAM90A9PA6NNJ1 464 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 NCOR1P1Q9H4R4 102 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 TMEM30BQ3MIR4 351 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 C1orf100Q5SVJ3 147 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 TSKUQ8WUA8 353 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 TIMM21Q9BVV7 248 aa10.73□□□□□ -0.69
USP47-202ENST00000339865 IGKV2-40A0A087WW87 121 aaPredicted RBP10.72□□□□□ -0.69
USP47-202ENST00000339865 IGKV2D-40P01614 121 aaPredicted RBP10.72□□□□□ -0.69
USP47-202ENST00000339865 NOVP48745 357 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms