RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CCDC144NLQ6NUI1 221 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 PIFOQ8TCI5 191 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 ARPC1AQ92747 370 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 TUBA4BQ9H853 241 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 NAT8Q9UHE5 227 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 ITPR3Q14573 2671 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 GCN1Q92616 2671 aaKnown RBP5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 MT-ND4LP03901 98 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 C8orf88P0DMB2 117 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 C16orf82Q7Z2V1 217 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 OCC1Q8TAD7 63 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 SGK494Q96LW2 274 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 KCNIP2Q9NS61 270 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 TECRQ9NZ01 308 aaKnown RBP5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 NOTCH2Q04721 2471 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 F8W735 103 aaPredicted RBP5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 CLN5O75503 358 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 FAM106CPP0CH98 169 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 LINC01551Q86U37 167 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 BLNKQ8WV28 456 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 RBM14Q96PK6 669 aaKnown RBP5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 C7orf69Q9H7B7 122 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 HIF1ANQ9NWT6 349 aa5.82□□□□□ -1.48
SRFBP1-201ENST00000339397 A0A087WWC5 75 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 K7EN84 100 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 PDE6DO43924 150 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 OR2J3O76001 311 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 NDUFB8O95169 186 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 AMY1AP04745 511 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 COX6B1P14854 86 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 LYZP61626 148 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 RANP62826 216 aaKnown RBP5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 OR5I1Q13606 314 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 NANPQ8TBE9 248 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 SAV1Q9H4B6 383 aaPredicted RBP5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 HECTD1Q9ULT8 2610 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 AKAP9Q99996 3911 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 MDFIC2A0A1B0GVS7 189 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 RPL35P42766 123 aaKnown RBP5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 RPS10P46783 165 aaKnown RBP5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 FAM3BP58499 235 aaPredicted RBP5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 UBE2L3P68036 154 aaKnown RBP5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 FLI1Q01543 452 aaPredicted RBP5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 LY6EQ16553 131 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 ECSCRQ19T08 205 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 ETFRF1Q6IPR1 90 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 Q6ZS46 218 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 TRGV9Q99603 122 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 POLR3KQ9Y2Y1 108 aaPredicted RBP5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 TBL2Q9Y4P3 447 aaKnown RBP5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 FLNAP21333 2647 aaKnown RBP5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 MYO9AB2RTY4 2548 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 TRAV34A0A0B4J273 112 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 IGHV1-69DA0A0B4J2H0 117 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 ATP6V0E1O15342 81 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 IGHV1-69P01742 117 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 PNRC1Q12796 327 aaPredicted RBP5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 PQLC2Q6ZP29 291 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 NHLRC2Q8NBF2 726 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 FXYD5Q96DB9 178 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 C17orf77Q96MU5 243 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 PAXXQ9BUH6 204 aa5.81□□□□□ -1.48
SRFBP1-201ENST00000339397 PDZD2O15018 2839 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 SETD2Q9BYW2 2564 aaPredicted RBP5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 IGLV11-55A0A075B6I3 123 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 OR2T8A6NH00 312 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 OOSP1A8MZH6 123 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 MSMBP08118 114 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 SELENOTP62341 195 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 GNG5P63218 68 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 Q71RC1 249 aaPredicted RBP5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 MS4A10Q96PG2 267 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 RASL11BQ9BPW5 248 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 OR51M1Q9H341 326 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 CLDN34H7C241 214 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 HYPMO75409 117 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 TRGC2P03986 189 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 RD3LP0DJH9 198 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 TAS2R45P59539 299 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 SNRPEP62304 92 aaKnown RBP5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 MRPL41Q8IXM3 137 aaKnown RBP5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 CHRDL1Q9BU40 450 aa5.8□□□□□ -1.48
SRFBP1-201ENST00000339397 A0A096LNT2 108 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 B4DEV8 164 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 RNF223E7ERA6 249 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 J3KRW8 73 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 NDUFS8O00217 210 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 CORTO00230 105 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 SLC17A3O00476 420 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 PFN1P07737 140 aaKnown RBP5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 BRS3P32247 399 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 UNQ5815/PRO19632Q6UWF5 114 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 LINC00518Q8N0U6 118 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 TTC9CQ8N5M4 171 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 ZNF491Q8N8L2 437 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 PFDN5Q99471 154 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 ASCL2Q99929 193 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 C19orf24Q9BVV8 132 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 TMEM167BQ9NRX6 74 aa5.79□□□□□ -1.48
SRFBP1-201ENST00000339397 HELTA6NFD8 242 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms