RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 LHFPL4Q7Z7J7 247 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 ZNF329Q86UD4 541 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 LINC00479Q96M42 142 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 RAB1BQ9H0U4 201 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 GSX1Q9H4S2 264 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 TNFRSF19Q9NS68 423 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 ABCA1O95477 2261 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 A0A1B0GUS0 222 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 GCGP01275 180 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 GNG4P50150 75 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 ARF6P62330 175 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 OR1L4Q8NGR5 311 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 SRSF12Q8WXF0 261 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 PACRGQ96M98 296 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 PFDN5Q99471 154 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 PAXXQ9BUH6 204 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 PRDM13Q9H4Q3 707 aa10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 AMMECR1Q9Y4X0 333 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP1-201ENST00000339269 I3L2K1 104 aa10.31□□□□□ -0.76
CDK5RAP1-201ENST00000339269 LINC00305Q7Z4B0 112 aa10.31□□□□□ -0.76
CDK5RAP1-201ENST00000339269 RNASE7Q9H1E1 156 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP1-201ENST00000339269 CENPEQ02224 2701 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 TRAV9-1A0A075B6T8 112 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 ADMP35318 185 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 DNLZQ5SXM8 178 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 ASPHD1Q5U4P2 390 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 PSMG3-AS1Q96PY0 264 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 RNF5Q99942 180 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 NUPR1O60356 82 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 SNRPCP09234 159 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 IGLC1P0CG04 106 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 GP9P14770 177 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 RAB4AP20338 218 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 CBLN1P23435 193 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 LINC00310P59036 64 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 PLP1P60201 277 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 SAPCD1Q5SSQ6 148 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 ETFRF1Q6IPR1 90 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 DYNAPQ8N1N2 210 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 OSTCQ9NRP0 149 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 CDC42EP3Q9UKI2 254 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 TP53TG3Q9ULZ0 132 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 TRAPPC1Q9Y5R8 145 aa10.3□□□□□ -0.76
CDK5RAP1-201ENST00000339269 LOC105371242A0A075B767 164 aa10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 NBPF19A0A087WUL8 3843 aa10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 M0R1W7 72 aa10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 NDUFS7O75251 213 aa10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 FLNBO75369 2602 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 NDUFA3O95167 84 aa10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 HIST1H1BP16401 226 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 PRTN3P24158 256 aa10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 CNN1P51911 297 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 NEU4Q8WWR8 484 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 SSBP3Q9BWW4 388 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 C7orf69Q9H7B7 122 aa10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 DPM3Q9P2X0 92 aa10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 CSMD1Q96PZ7 3565 aa10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 ASH1LQ9NR48 2969 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP1-201ENST00000339269 K7EIM0 57 aa10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 ISLRO14498 428 aa10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 ORM2P19652 201 aa10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 CD24P25063 80 aa10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 ZFP36P26651 326 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 HTR1DP28221 377 aa10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 ERVFC1-1P60608 527 aa10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 FXYD3Q14802 87 aa10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 TMEM256Q8N2U0 113 aa10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 NPBQ8NG41 125 aa10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 TIMD4Q96H15 378 aa10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 BTF3L4Q96K17 158 aa10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 HILPDAQ9Y5L2 63 aa10.28□□□□□ -0.76
CDK5RAP1-201ENST00000339269 TRAV34A0A0B4J273 112 aa10.27□□□□□ -0.76
CDK5RAP1-201ENST00000339269 PEX7O00628 323 aa10.27□□□□□ -0.76
CDK5RAP1-201ENST00000339269 CIDEAO60543 219 aa10.27□□□□□ -0.76
CDK5RAP1-201ENST00000339269 IGKV1-17P01599 117 aa10.27□□□□□ -0.76
CDK5RAP1-201ENST00000339269 GNG5P63218 68 aa10.27□□□□□ -0.76
CDK5RAP1-201ENST00000339269 MRPL41Q8IXM3 137 aaKnown RBP10.27□□□□□ -0.76
CDK5RAP1-201ENST00000339269 GBGT1Q8N5D6 347 aa10.27□□□□□ -0.76
CDK5RAP1-201ENST00000339269 NHLRC2Q8NBF2 726 aa10.27□□□□□ -0.76
CDK5RAP1-201ENST00000339269 OR1B1Q8NGR6 318 aa10.27□□□□□ -0.76
CDK5RAP1-201ENST00000339269 MBD6Q96DN6 1003 aa10.27□□□□□ -0.76
CDK5RAP1-201ENST00000339269 PERPQ96FX8 193 aa10.27□□□□□ -0.76
CDK5RAP1-201ENST00000339269 A6NNC1 897 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 CORTO00230 105 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 GZMBP10144 247 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 COL8A1P27658 744 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 TAS2R60P59551 318 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 JOSD1Q15040 202 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 MMDQ15546 238 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 SSX2Q16385 188 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 RPEL1Q2QD12 228 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 TIGITQ495A1 244 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 LEMD1Q68G75 181 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 OR8I2Q8N0Y5 310 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 FAM168AQ92567 244 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 SRSF8Q9BRL6 282 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 WNT10AQ9GZT5 417 aa10.27□□□□□ -0.77
CDK5RAP1-201ENST00000339269 CELSR2Q9HCU4 2923 aa10.26□□□□□ -0.77
CDK5RAP1-201ENST00000339269 A0A1W2PRD5 423 aa10.26□□□□□ -0.77
CDK5RAP1-201ENST00000339269 A0A1W2PRF3 423 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms