RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 UBL5Q9BZL1 73 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 ARRDC1-AS1Q9H2J1 176 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 COL24A1Q17RW2 1714 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 TRGV2A0A075B6R0 118 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 CCL8P80075 99 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 GLRX5Q86SX6 157 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 ZNF525Q8N782 197 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 ZNF721Q8TF20 911 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 CRIM1Q9NZV1 1036 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 MIR17HGQ75NE6 70 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 TIMM21Q9BVV7 248 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 FOXA2Q9Y261 457 aaPredicted RBP5.2□□□□□ -1.58
CSMD1-201ENST00000335551 IGHV3-72A0A0B4J1Y9 119 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 C9JAW5 83 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 FGF16O43320 207 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 CCL3P10147 92 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 IGFBP3P17936 291 aaPredicted RBP5.2□□□□□ -1.58
CSMD1-201ENST00000335551 OR5P3Q8WZ94 311 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 NABP1Q96AH0 204 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 KCNK17Q96T54 332 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 LY96Q9Y6Y9 160 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 A0A0G2JMZ2 1700 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 LRRC37A2A6NM11 1700 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 LRRC37AA6NMS7 1700 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 ZNF385AQ96PM9 386 aaKnown RBP5.2□□□□□ -1.58
CSMD1-201ENST00000335551 TMEM126AQ9H061 195 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 ZFYVE26Q68DK2 2539 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 TRAV8-3A0A0A6YYJ7 113 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 RTBDNQ9BSG5 229 aaPredicted RBP5.2□□□□□ -1.58
CSMD1-201ENST00000335551 GAGE12HA6NDE8 117 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 TMEM144Q7Z5S9 345 aa5.2□□□□□ -1.58
CSMD1-201ENST00000335551 SPINK2P20155 84 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 SLC25A47Q6Q0C1 308 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 C16orf47Q6ZP98 133 aaPredicted RBP5.19□□□□□ -1.58
CSMD1-201ENST00000335551 GTSCR1Q86UQ5 136 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 FGF11Q92914 225 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 RNF222A6NCQ9 220 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 RBM3P98179 157 aaKnown RBP5.19□□□□□ -1.58
CSMD1-201ENST00000335551 RASL10AQ92737 203 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 IGKV3D-20A0A0C4DH25 116 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 IL18BPO95998 194 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 OR13A1Q8NGR1 328 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 KLHDC3Q9BQ90 382 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 ZXDCQ2QGD7 858 aaPredicted RBP5.19□□□□□ -1.58
CSMD1-201ENST00000335551 PCNX3Q9H6A9 2034 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 IGLV1-36A0A0B4J1U3 117 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 C2CD4DB7Z1M9 353 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 FAM90A1Q86YD7 464 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 TMEM167AQ8TBQ9 72 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 MSGN1A6NI15 193 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 HRKO00198 91 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 EGR2P11161 476 aaPredicted RBP5.19□□□□□ -1.58
CSMD1-201ENST00000335551 SRSF3P84103 164 aaKnown RBP5.19□□□□□ -1.58
CSMD1-201ENST00000335551 RPL39P5Q59GN2 51 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 PEAR1Q5VY43 1037 aaPredicted RBP5.19□□□□□ -1.58
CSMD1-201ENST00000335551 UBE2DNLQ8IWF7 75 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 ITLN1Q8WWA0 313 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 WBP1LQ9NX94 342 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 ANAPC10Q9UM13 185 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 KIF26AQ9ULI4 1882 aaPredicted RBP5.19□□□□□ -1.58
CSMD1-201ENST00000335551 F8P00451 2351 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 FAM219BQ5XKK7 198 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 NAA38Q9BRA0 125 aaKnown RBP5.19□□□□□ -1.58
CSMD1-201ENST00000335551 C1QTNF4Q9BXJ3 329 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 VGLL1Q99990 258 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 ZNF831Q5JPB2 1677 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 DSCAMO60469 2012 aa5.19□□□□□ -1.58
CSMD1-201ENST00000335551 TSSC4Q9Y5U2 329 aaPredicted RBP5.19□□□□□ -1.58
CSMD1-201ENST00000335551 TRAV14DV4A0A0A6YYC5 116 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 TCRBV4S1A1TA0A5B7 111 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 hDV102S1A0JD36 115 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 D6R8Y8 96 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 GLI3P10071 1580 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 TMEM196Q5HYL7 178 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 TCTEX1D4Q5JR98 221 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 FBXL7Q9UJT9 491 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 TRAV41A0A0B4J266 112 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 SMAD7O15105 426 aaKnown RBP5.18□□□□□ -1.58
CSMD1-201ENST00000335551 GAGE5Q13069 117 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 GAGE6Q13070 117 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 TMEM54Q969K7 222 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 NOTCH2Q04721 2471 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 K7EP13 123 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 IGKV3-20P01619 116 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 AZU1P20160 251 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 ACP7Q6ZNF0 438 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 A0A1W2PPV9 198 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 C15orf61A6NNL5 157 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 GNG5P63218 68 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 ADARB2-AS1A8MUL3 147 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 CXCL1P09341 107 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 PRR33A8MZF0 331 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 UPK2O00526 184 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 HAPLN4Q86UW8 402 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 GPHA2Q96T91 129 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 IGHV3-48P01763 117 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 CDKN1BP46527 198 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 ZNF114Q8NC26 417 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 TTTY12Q9BZ98 90 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 TNRC6BQ9UPQ9 1833 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms