RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 FCN3O75636 299 aa11.27□□□□□ -0.61
SF1-202ENST00000334944 IGLC1P0CG04 106 aa11.27□□□□□ -0.61
SF1-202ENST00000334944 SAMD13Q5VXD3 122 aa11.27□□□□□ -0.61
SF1-202ENST00000334944 C5orf17Q8NAS9 161 aa11.27□□□□□ -0.61
SF1-202ENST00000334944 C7orf71A4D174 169 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 THBDP07204 575 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 FAM87AP0C7U9 286 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 GNG4P50150 75 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 DIAPH2-AS1Q14236 149 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 MALRD1Q5VYJ5 2156 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 COL12A1Q99715 3063 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 APOA2P02652 100 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 FOXA3P55318 350 aaPredicted RBP11.26□□□□□ -0.61
SF1-202ENST00000334944 CR1LQ2VPA4 569 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 SLC25A34Q6PIV7 304 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 LYPD2Q6UXB3 125 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 ZNF788Q6ZQV5 615 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 ASCL5Q7RTU5 278 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 SPACA3Q8IXA5 215 aa11.26□□□□□ -0.61
SF1-202ENST00000334944 IGHV3-48P01763 117 aa11.25□□□□□ -0.61
SF1-202ENST00000334944 BMI1P35226 326 aa11.25□□□□□ -0.61
SF1-202ENST00000334944 RHOBP62745 196 aa11.25□□□□□ -0.61
SF1-202ENST00000334944 VWC2Q2TAL6 325 aa11.25□□□□□ -0.61
SF1-202ENST00000334944 RAB37Q96AX2 223 aa11.25□□□□□ -0.61
SF1-202ENST00000334944 C1orf159Q96HA4 380 aa11.25□□□□□ -0.61
SF1-202ENST00000334944 HILPDAQ9Y5L2 63 aa11.25□□□□□ -0.61
SF1-202ENST00000334944 SPTAN1Q13813 2472 aaKnown RBP11.25□□□□□ -0.61
SF1-202ENST00000334944 LINC00869P0C866 280 aa11.25□□□□□ -0.61
SF1-202ENST00000334944 GATA4P43694 442 aa11.25□□□□□ -0.61
SF1-202ENST00000334944 OR10W1Q8NGF6 305 aa11.25□□□□□ -0.61
SF1-202ENST00000334944 OR8B3Q8NGG8 313 aa11.25□□□□□ -0.61
SF1-202ENST00000334944 IDI2-AS1Q9NZ38 188 aa11.25□□□□□ -0.61
SF1-202ENST00000334944 SLC25A10Q9UBX3 287 aaPredicted RBP11.25□□□□□ -0.61
SF1-202ENST00000334944 TMEM238LA0A1B0GVL6 79 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 FBLL1A6NHQ2 334 aaKnown RBP11.24□□□□□ -0.61
SF1-202ENST00000334944 G3V4G9 280 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 AMY1AP04745 511 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 CT45A6P0DMU7 189 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 CT45A5P0DMU8 189 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 CT45A7P0DMV0 189 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 GDF5OSQ5U4N7 250 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 WDR73Q6P4I2 378 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 FAM222BQ8WU58 562 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 JMJD8Q96S16 334 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 GGTLC1Q9BX51 225 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 TNFRSF19Q9NS68 423 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 C15orf61A6NNL5 157 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 GCHFRP30047 84 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 MFAP2P55001 183 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 TBR1Q16650 682 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 SSX8Q7RTT4 187 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 SAP30LQ9HAJ7 183 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 NPVFQ9HCQ7 196 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 THYN1Q9P016 225 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 H3BUT2 72 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 LINC00479Q96M42 142 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 ZNF331Q9NQX6 463 aaPredicted RBP11.24□□□□□ -0.61
SF1-202ENST00000334944 OR51B2Q9Y5P1 312 aa11.24□□□□□ -0.61
SF1-202ENST00000334944 TRBV9A0A0B4J1U6 114 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 HELTA6NFD8 242 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 C17orf100A8MU93 164 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 PRSS46E5RG02 174 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 LYNX1G3V0Z9 82 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 MT-ND6P03923 174 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 STAG3L2P0CL84 134 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 STAG3L3P0CL85 134 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 LYNX1P0DP58 116 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 IGFBP2P18065 325 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 RPL24P83731 157 aaKnown RBP11.23□□□□□ -0.61
SF1-202ENST00000334944 OR4A5Q8NH83 315 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 TMEM70Q9BUB7 260 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 MRPL20Q9BYC9 149 aaKnown RBP11.23□□□□□ -0.61
SF1-202ENST00000334944 ENY2Q9NPA8 101 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 RBPJQ06330 500 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 SCNM1Q9BWG6 230 aa11.23□□□□□ -0.61
SF1-202ENST00000334944 PEF1Q9UBV8 284 aaKnown RBP11.23□□□□□ -0.61
SF1-202ENST00000334944 RALYQ9UKM9 306 aaKnown RBP11.23□□□□□ -0.61
SF1-202ENST00000334944 C22orf46C9J442 243 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 J3QR06 171 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 CXorf1O96002 111 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 ZNF138P52744 262 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 RPUSD1Q9UJJ7 312 aaKnown RBP11.22□□□□□ -0.61
SF1-202ENST00000334944 ARHGAP32A7KAX9 2087 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 TRAV9-1A0A075B6T8 112 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 HLA-DQA1P01909 254 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 OR10J4P0C629 311 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 APELAP0DMC3 54 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 PPIAL4GP0DN37 164 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 HSPE1P61604 102 aaKnown RBP11.22□□□□□ -0.61
SF1-202ENST00000334944 C10orf55Q5SWW7 151 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 TMEM116Q8NCL8 245 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 ZNF355PQ9NSJ1 428 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 IGHV3-72A0A0B4J1Y9 119 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 AZU1P20160 251 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 IBA57Q5T440 356 aaKnown RBP11.22□□□□□ -0.61
SF1-202ENST00000334944 TMEM200BQ69YZ2 307 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 FAM216AQ8WUB2 273 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 TMEM14BQ9NUH8 114 aa11.22□□□□□ -0.61
SF1-202ENST00000334944 E7EUB6 86 aa11.21□□□□□ -0.61
SF1-202ENST00000334944 SAA1P0DJI8 122 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms