RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SLC25A16P16260 332 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 KIR2DL5BA0A0G2JN68 375 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 KIR2DL5BA0A0G2JPC4 375 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 G3V2L1 256 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 EGR4Q05215 589 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 KIR2DL5AQ8N109 375 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 ARID2Q68CP9 1835 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 NPIPB11E5RHQ5 1161 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 BHLHA9Q7RTU4 235 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 VKORC1Q9BQB6 163 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 RPP21Q9H633 154 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 OTOGLQ3ZCN5 2332 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 PFN2P35080 140 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 SPINT3P49223 89 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 MS4A13Q5J8X5 152 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 KLK13Q9UKR3 277 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 PTGDR2Q9Y5Y4 395 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 RBBP6Q7Z6E9 1792 aaKnown RBP5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 LINC00467Q9BRT7 94 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 TIMM21Q9BVV7 248 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 A0A1W2PRE2 83 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM90A1Q86YD7 464 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 CXorf49A8MYA2 514 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 TIMM17BO60830 172 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZNF362Q5T0B9 420 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 SCXQ7RTU7 201 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 PRNTQ86SH4 94 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 PRDM14Q9GZV8 571 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 GLIPR2Q9H4G4 154 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 MSRB2Q9Y3D2 182 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 AMTNQ6UX39 209 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 SIT1Q9Y3P8 196 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 ATG2AQ2TAZ0 1938 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 LINC01553A4QN01 128 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 Q6ZS92 163 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 ANAPC10Q9UM13 185 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 SPRY1O43609 319 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 NDUFA3O95167 84 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 LY6DQ14210 128 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZIC1Q15915 447 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 TCTN3Q6NUS6 607 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 SERP2Q8N6R1 65 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 TIMM17AQ99595 171 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 WFDC8Q8IUA0 241 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 TMEM178AQ8NBL3 297 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 C1RLQ9NZP8 487 aa5.1□□□□□ -1.59
CDC42BPA-201ENST00000334218 LINC01619G3V211 115 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 H0YL77 283 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 ASPHD1Q5U4P2 390 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZNF645Q8N7E2 425 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 C16orf52Q8NHV5 167 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 LYZL4Q96KX0 146 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 SIGLEC9Q9Y336 463 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 ARFGEF2Q9Y6D5 1785 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 A0A1B0GTL3 188 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 CD68P34810 354 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZNF137PP52743 207 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 NANOS2P60321 138 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 INSL4Q14641 139 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 GFI1BQ5VTD9 330 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 C9JCJ5 164 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 LCN12Q6JVE5 192 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 TEX43Q6ZNM6 134 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZNF672Q499Z4 452 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 LY6G5BQ8NDX9 201 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 MRPL53Q96EL3 112 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 PRSS21Q9Y6M0 314 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 KIAA1671Q9BY89 1806 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 ARAP2Q8WZ64 1704 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 A0A087X0K7 114 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 HIGD1CA8MV81 97 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 CFHR2P36980 270 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM189BP81408 668 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 FOXI1Q12951 378 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 NRACQ8N912 160 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 FANCD2OSQ96PS1 177 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 PRSS27Q9BQR3 290 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 SLC25A37Q9NYZ2 338 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 SAA1P0DJI8 122 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 DCAF4L2Q8NA75 395 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 FOXQ1Q9C009 403 aa5.09□□□□□ -1.59
CDC42BPA-201ENST00000334218 TRAV8-3A0A0A6YYJ7 113 aa5.09□□□□□ -1.6
CDC42BPA-201ENST00000334218 GFRA3O60609 400 aa5.09□□□□□ -1.6
CDC42BPA-201ENST00000334218 LGALS7P47929 136 aa5.09□□□□□ -1.6
CDC42BPA-201ENST00000334218 BAHD1Q8TBE0 780 aaPredicted RBP5.09□□□□□ -1.6
CDC42BPA-201ENST00000334218 CCL20P78556 96 aa5.09□□□□□ -1.6
CDC42BPA-201ENST00000334218 SLC25A29Q8N8R3 303 aa5.09□□□□□ -1.6
CDC42BPA-201ENST00000334218 TXNRD3NBQ6F5E7 133 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 A0A0G2JNJ9 132 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 SAP30O75446 220 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 DUSP14O95147 198 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 ARL14EPLP0DKL9 152 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 IGLC2P0DOY2 106 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 IGLC3P0DOY3 106 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 C17orf47Q8NEP4 570 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 ZNF721Q8TF20 911 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 HS3ST6Q96QI5 342 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 NRTNQ99748 197 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 Q9UFV3 132 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms